RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 HES3Q5TGS1 186 aa15.13■□□□□ 0.01
USP39-217ENST00000491659 DENND2CQ68D51 928 aa15.13■□□□□ 0.01
USP39-217ENST00000491659 SLC9A4Q6AI14 798 aa15.13■□□□□ 0.01
USP39-217ENST00000491659 ALG1LQ6GMV1 187 aa15.13■□□□□ 0.01
USP39-217ENST00000491659 ENPP7Q6UWV6 458 aa15.13■□□□□ 0.01
USP39-217ENST00000491659 RFX6Q8HWS3 928 aa15.13■□□□□ 0.01
USP39-217ENST00000491659 HID1Q8IV36 788 aa15.13■□□□□ 0.01
USP39-217ENST00000491659 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.13■□□□□ 0.01
USP39-217ENST00000491659 PLD5Q8N7P1 536 aa15.13■□□□□ 0.01
USP39-217ENST00000491659 FAM181AQ8N9Y4 354 aa15.13■□□□□ 0.01
USP39-217ENST00000491659 WDR92Q96MX6 357 aa15.13■□□□□ 0.01
USP39-217ENST00000491659 TCEAL2Q9H3H9 227 aaPredicted RBP15.13■□□□□ 0.01
USP39-217ENST00000491659 HYOU1Q9Y4L1 999 aa15.13■□□□□ 0.01
USP39-217ENST00000491659 HEY1Q9Y5J3 304 aa15.13■□□□□ 0.01
USP39-217ENST00000491659 MYLKQ15746 1914 aa15.13■□□□□ 0.01
USP39-217ENST00000491659 FRYQ5TBA9 3013 aa15.13■□□□□ 0.01
USP39-217ENST00000491659 IGF2RP11717 2491 aa15.12■□□□□ 0.01
USP39-217ENST00000491659 C3orf70A6NLC5 250 aaPredicted RBP15.12■□□□□ 0.01
USP39-217ENST00000491659 PSMD11O00231 422 aa15.12■□□□□ 0.01
USP39-217ENST00000491659 TPP1O14773 563 aa15.12■□□□□ 0.01
USP39-217ENST00000491659 PPP1R12AO14974 1030 aaPredicted RBP15.12■□□□□ 0.01
USP39-217ENST00000491659 PSTPIP1O43586 416 aa15.12■□□□□ 0.01
USP39-217ENST00000491659 ANXA6P08133 673 aa15.12■□□□□ 0.01
USP39-217ENST00000491659 KELP23276 732 aa15.12■□□□□ 0.01
USP39-217ENST00000491659 HK3P52790 923 aa15.12■□□□□ 0.01
USP39-217ENST00000491659 EPHB1P54762 984 aa15.12■□□□□ 0.01
USP39-217ENST00000491659 KIAA1024LP59773 190 aa15.12■□□□□ 0.01
USP39-217ENST00000491659 PPIDQ08752 370 aaKnown RBP15.12■□□□□ 0.01
USP39-217ENST00000491659 SLC10A2Q12908 348 aaPredicted RBP15.12■□□□□ 0.01
USP39-217ENST00000491659 PDK1Q15118 436 aa15.12■□□□□ 0.01
USP39-217ENST00000491659 ELOCQ15369 112 aa15.12■□□□□ 0.01
USP39-217ENST00000491659 ALG11Q2TAA5 492 aa15.12■□□□□ 0.01
USP39-217ENST00000491659 DEFB133Q30KQ1 61 aa15.12■□□□□ 0.01
USP39-217ENST00000491659 ESRP1Q6NXG1 681 aaKnown RBP15.12■□□□□ 0.01
USP39-217ENST00000491659 MARCH9Q86YJ5 346 aa15.12■□□□□ 0.01
USP39-217ENST00000491659 FSTL5Q8N475 847 aaPredicted RBP15.12■□□□□ 0.01
USP39-217ENST00000491659 PLA2G15Q8NCC3 412 aa15.12■□□□□ 0.01
USP39-217ENST00000491659 TPCN2Q8NHX9 752 aa15.12■□□□□ 0.01
USP39-217ENST00000491659 LRRN4Q8WUT4 740 aa15.12■□□□□ 0.01
USP39-217ENST00000491659 GLMNQ92990 594 aa15.12■□□□□ 0.01
USP39-217ENST00000491659 RNF25Q96BH1 459 aaPredicted RBP15.12■□□□□ 0.01
USP39-217ENST00000491659 PANX2Q96RD6 677 aa15.12■□□□□ 0.01
USP39-217ENST00000491659 MCCC1Q96RQ3 725 aaPredicted RBP15.12■□□□□ 0.01
USP39-217ENST00000491659 CCDC86Q9H6F5 360 aaKnown RBP15.12■□□□□ 0.01
USP39-217ENST00000491659 WDR26Q9H7D7 661 aa15.12■□□□□ 0.01
USP39-217ENST00000491659 SALL4Q9UJQ4 1053 aa15.12■□□□□ 0.01
USP39-217ENST00000491659 PNMA8BQ9ULN7 279 aaPredicted RBP15.12■□□□□ 0.01
USP39-217ENST00000491659 DOLKQ9UPQ8 538 aa15.12■□□□□ 0.01
USP39-217ENST00000491659 PCDHA13Q9Y5I0 950 aa15.12■□□□□ 0.01
USP39-217ENST00000491659 A0A0A6YYK5 440 aaPredicted RBP15.11■□□□□ 0.01
USP39-217ENST00000491659 NPIPB15A6NHN6 443 aaPredicted RBP15.11■□□□□ 0.01
USP39-217ENST00000491659 LMO7DNF2Z398 122 aa15.11■□□□□ 0.01
USP39-217ENST00000491659 GP1BAP07359 652 aa15.11■□□□□ 0.01
USP39-217ENST00000491659 ALPIP09923 528 aa15.11■□□□□ 0.01
USP39-217ENST00000491659 TSHRP16473 764 aa15.11■□□□□ 0.01
USP39-217ENST00000491659 CTPS1P17812 591 aa15.11■□□□□ 0.01
USP39-217ENST00000491659 GM2AP17900 193 aa15.11■□□□□ 0.01
USP39-217ENST00000491659 LHCGRP22888 699 aa15.11■□□□□ 0.01
USP39-217ENST00000491659 CLDN6P56747 220 aa15.11■□□□□ 0.01
USP39-217ENST00000491659 SRP54P61011 504 aaKnown RBP15.11■□□□□ 0.01
USP39-217ENST00000491659 DYNLT1P63172 113 aa15.11■□□□□ 0.01
USP39-217ENST00000491659 IFI35P80217 286 aaPredicted RBP15.11■□□□□ 0.01
USP39-217ENST00000491659 AP1B1Q10567 949 aa15.11■□□□□ 0.01
USP39-217ENST00000491659 C1orf61Q13536 156 aa15.11■□□□□ 0.01
USP39-217ENST00000491659 RD3Q7Z3Z2 195 aa15.11■□□□□ 0.01
USP39-217ENST00000491659 TMTC1Q8IUR5 882 aa15.11■□□□□ 0.01
USP39-217ENST00000491659 PDCD7Q8N8D1 485 aaKnown RBP15.11■□□□□ 0.01
USP39-217ENST00000491659 PIH1D2Q8WWB5 315 aa15.11■□□□□ 0.01
USP39-217ENST00000491659 TSACCQ96A04 125 aaPredicted RBP15.11■□□□□ 0.01
USP39-217ENST00000491659 FUBP1Q96AE4 644 aaKnown RBP15.11■□□□□ 0.01
USP39-217ENST00000491659 DTD2Q96FN9 168 aa15.11■□□□□ 0.01
USP39-217ENST00000491659 SCRN2Q96FV2 425 aa15.11■□□□□ 0.01
USP39-217ENST00000491659 COQ10AQ96MF6 247 aa15.11■□□□□ 0.01
USP39-217ENST00000491659 LGMNQ99538 433 aa15.11■□□□□ 0.01
USP39-217ENST00000491659 TDRD1Q9BXT4 1180 aaKnown RBP15.11■□□□□ 0.01
USP39-217ENST00000491659 DNPEPQ9ULA0 475 aa15.11■□□□□ 0.01
USP39-217ENST00000491659 PPIL1Q9Y3C6 166 aa15.11■□□□□ 0.01
USP39-217ENST00000491659 CACNA1BQ00975 2339 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 LY6G6EA0A0G2JKS1 128 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 A0A0J9YYE9 177 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 GOLGA6CA6NDK9 693 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 GOLGA6BA6NDN3 693 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 KCNK1O00180 336 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 PDE2AO00408 941 aaPredicted RBP15.1■□□□□ 0.01
USP39-217ENST00000491659 FZD6O60353 706 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 GCATO75600 419 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 TNFP01375 233 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 JCHAINP01591 159 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 TRBC1P01850 177 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 PDHA1P08559 390 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 HOXC4P09017 264 aaPredicted RBP15.1■□□□□ 0.01
USP39-217ENST00000491659 GOLGA6DP0CG33 693 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 MYF5P13349 255 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 ZNF30P17039 623 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 RPIAP49247 311 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 INSM1Q01101 510 aaPredicted RBP15.1■□□□□ 0.01
USP39-217ENST00000491659 TFDP2Q14188 446 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 NR0B2Q15466 257 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 C6orf132Q5T0Z8 1188 aa15.1■□□□□ 0.01
USP39-217ENST00000491659 LRRC66Q68CR7 880 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms