RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 RPLP0P05388 317 aaKnown RBP8.31□□□□□ -1.08
APP-216ENST00000491395 HOXC4P09017 264 aaPredicted RBP8.31□□□□□ -1.08
APP-216ENST00000491395 IL4RP24394 825 aa8.31□□□□□ -1.08
APP-216ENST00000491395 TRIM23P36406 574 aa8.31□□□□□ -1.08
APP-216ENST00000491395 ARL4AP40617 200 aa8.31□□□□□ -1.08
APP-216ENST00000491395 FANCCQ00597 558 aa8.31□□□□□ -1.08
APP-216ENST00000491395 TRAF2Q12933 501 aa8.31□□□□□ -1.08
APP-216ENST00000491395 SPIDRQ14159 915 aa8.31□□□□□ -1.08
APP-216ENST00000491395 ZNF235Q14590 738 aa8.31□□□□□ -1.08
APP-216ENST00000491395 CNGA3Q16281 694 aa8.31□□□□□ -1.08
APP-216ENST00000491395 BROXQ5VW32 411 aa8.31□□□□□ -1.08
APP-216ENST00000491395 DENND2CQ68D51 928 aa8.31□□□□□ -1.08
APP-216ENST00000491395 PNCKQ6P2M8 343 aa8.31□□□□□ -1.08
APP-216ENST00000491395 OGFOD3Q6PK18 319 aa8.31□□□□□ -1.08
APP-216ENST00000491395 IGF2-ASQ6U949 168 aa8.31□□□□□ -1.08
APP-216ENST00000491395 PCSK4Q6UW60 755 aa8.31□□□□□ -1.08
APP-216ENST00000491395 TMCO3Q6UWJ1 677 aa8.31□□□□□ -1.08
APP-216ENST00000491395 TAF8Q7Z7C8 310 aa8.31□□□□□ -1.08
APP-216ENST00000491395 B3GNT8Q7Z7M8 397 aa8.31□□□□□ -1.08
APP-216ENST00000491395 SDR16C5Q8N3Y7 309 aa8.31□□□□□ -1.08
APP-216ENST00000491395 Q8N9G6 341 aaPredicted RBP8.31□□□□□ -1.08
APP-216ENST00000491395 FAM46DQ8NEK8 389 aa8.31□□□□□ -1.08
APP-216ENST00000491395 OR56A4Q8NGH8 313 aa8.31□□□□□ -1.08
APP-216ENST00000491395 CCL4L1Q8NHW4 92 aa8.31□□□□□ -1.08
APP-216ENST00000491395 WDR36Q8NI36 951 aaKnown RBP8.31□□□□□ -1.08
APP-216ENST00000491395 WDR48Q8TAF3 677 aa8.31□□□□□ -1.08
APP-216ENST00000491395 PDCD6IPQ8WUM4 868 aaKnown RBP8.31□□□□□ -1.08
APP-216ENST00000491395 CPLX3Q8WVH0 158 aa8.31□□□□□ -1.08
APP-216ENST00000491395 GRAMD1AQ96CP6 724 aa8.31□□□□□ -1.08
APP-216ENST00000491395 TRIM11Q96F44 468 aa8.31□□□□□ -1.08
APP-216ENST00000491395 COQ10AQ96MF6 247 aa8.31□□□□□ -1.08
APP-216ENST00000491395 GFM1Q96RP9 751 aaKnown RBP8.31□□□□□ -1.08
APP-216ENST00000491395 RBM15Q96T37 977 aaKnown RBP eCLIP8.31□□□□□ -1.08
APP-216ENST00000491395 TMEM168Q9H0V1 697 aa8.31□□□□□ -1.08
APP-216ENST00000491395 THAP2Q9H0W7 228 aa8.31□□□□□ -1.08
APP-216ENST00000491395 CBX8Q9HC52 389 aa8.31□□□□□ -1.08
APP-216ENST00000491395 CPNE5Q9HCH3 593 aa8.31□□□□□ -1.08
APP-216ENST00000491395 PCDH18Q9HCL0 1135 aa8.31□□□□□ -1.08
APP-216ENST00000491395 CYP4F12Q9HCS2 524 aa8.31□□□□□ -1.08
APP-216ENST00000491395 THSD1Q9NS62 852 aa8.31□□□□□ -1.08
APP-216ENST00000491395 MOSPD1Q9UJG1 213 aa8.31□□□□□ -1.08
APP-216ENST00000491395 PCDHGA8Q9Y5G5 932 aa8.31□□□□□ -1.08
APP-216ENST00000491395 CFAP46Q8IYW2 2715 aa8.31□□□□□ -1.08
APP-216ENST00000491395 ZNF462Q96JM2 2506 aa8.3□□□□□ -1.08
APP-216ENST00000491395 A0A087X0T9 212 aa8.3□□□□□ -1.08
APP-216ENST00000491395 CCDC187A0A096LP49 1063 aa8.3□□□□□ -1.08
APP-216ENST00000491395 A0A0U1RQS6 177 aa8.3□□□□□ -1.08
APP-216ENST00000491395 TEX51A0A1B0GUA7 166 aa8.3□□□□□ -1.08
APP-216ENST00000491395 SYCE3A1L190 88 aa8.3□□□□□ -1.08
APP-216ENST00000491395 AGRPO00253 132 aa8.3□□□□□ -1.08
APP-216ENST00000491395 HTRA2O43464 458 aaPredicted RBP8.3□□□□□ -1.08
APP-216ENST00000491395 NOBOXO60393 691 aa8.3□□□□□ -1.08
APP-216ENST00000491395 C1QL1O75973 258 aa8.3□□□□□ -1.08
APP-216ENST00000491395 HEXIM1O94992 359 aaKnown RBP8.3□□□□□ -1.08
APP-216ENST00000491395 CPP00450 1065 aa8.3□□□□□ -1.08
APP-216ENST00000491395 FUCA1P04066 466 aa8.3□□□□□ -1.08
APP-216ENST00000491395 CYP1A2P05177 515 aa8.3□□□□□ -1.08
APP-216ENST00000491395 FAM228BP0C875 321 aa8.3□□□□□ -1.08
APP-216ENST00000491395 HGFP14210 728 aa8.3□□□□□ -1.08
APP-216ENST00000491395 CR2P20023 1033 aa8.3□□□□□ -1.08
APP-216ENST00000491395 KELP23276 732 aa8.3□□□□□ -1.08
APP-216ENST00000491395 HSPA9P38646 679 aaKnown RBP8.3□□□□□ -1.08
APP-216ENST00000491395 PBX1P40424 430 aa8.3□□□□□ -1.08
APP-216ENST00000491395 ETV3P41162 512 aa8.3□□□□□ -1.08
APP-216ENST00000491395 SSR1P43307 286 aaKnown RBP8.3□□□□□ -1.08
APP-216ENST00000491395 TMPRSS3P57727 454 aa8.3□□□□□ -1.08
APP-216ENST00000491395 MAXP61244 160 aa8.3□□□□□ -1.08
APP-216ENST00000491395 SLC25A11Q02978 314 aaKnown RBP8.3□□□□□ -1.08
APP-216ENST00000491395 MMRN1Q13201 1228 aa8.3□□□□□ -1.08
APP-216ENST00000491395 PIGHQ14442 188 aaPredicted RBP8.3□□□□□ -1.08
APP-216ENST00000491395 ATP13A4Q4VNC1 1196 aa8.3□□□□□ -1.08
APP-216ENST00000491395 TDRD12Q587J7 1177 aaKnown RBP8.3□□□□□ -1.08
APP-216ENST00000491395 FIGNQ5HY92 759 aa8.3□□□□□ -1.08
APP-216ENST00000491395 ARHGAP40Q5TG30 622 aa8.3□□□□□ -1.08
APP-216ENST00000491395 HSD11B1LQ7Z5J1 315 aa8.3□□□□□ -1.08
APP-216ENST00000491395 LUZP1Q86V48 1076 aa8.3□□□□□ -1.08
APP-216ENST00000491395 CPNE8Q86YQ8 564 aa8.3□□□□□ -1.08
APP-216ENST00000491395 CBARPQ8N350 705 aaPredicted RBP8.3□□□□□ -1.08
APP-216ENST00000491395 ARL14Q8N4G2 192 aa8.3□□□□□ -1.08
APP-216ENST00000491395 ATPAF2Q8N5M1 289 aa8.3□□□□□ -1.08
APP-216ENST00000491395 GPR156Q8NFN8 814 aa8.3□□□□□ -1.08
APP-216ENST00000491395 PTCD2Q8WV60 388 aaKnown RBP8.3□□□□□ -1.08
APP-216ENST00000491395 TEKT4Q8WW24 435 aa8.3□□□□□ -1.08
APP-216ENST00000491395 SMIM14Q96QK8 99 aa8.3□□□□□ -1.08
APP-216ENST00000491395 NUDCD1Q96RS6 583 aa8.3□□□□□ -1.08
APP-216ENST00000491395 NUP85Q9BW27 656 aa8.3□□□□□ -1.08
APP-216ENST00000491395 FOXP3Q9BZS1 431 aa8.3□□□□□ -1.08
APP-216ENST00000491395 LRRN3Q9H3W5 708 aa8.3□□□□□ -1.08
APP-216ENST00000491395 WDR26Q9H7D7 661 aa8.3□□□□□ -1.08
APP-216ENST00000491395 SUDS3Q9H7L9 328 aaPredicted RBP8.3□□□□□ -1.08
APP-216ENST00000491395 EPB41L5Q9HCM4 733 aa8.3□□□□□ -1.08
APP-216ENST00000491395 SPATS2LQ9NUQ6 558 aaKnown RBP8.3□□□□□ -1.08
APP-216ENST00000491395 IP6K2Q9UHH9 426 aa8.3□□□□□ -1.08
APP-216ENST00000491395 ANAPC7Q9UJX3 599 aa8.3□□□□□ -1.08
APP-216ENST00000491395 ATXN7L1Q9ULK2 861 aaPredicted RBP8.3□□□□□ -1.08
APP-216ENST00000491395 PHTF1Q9UMS5 762 aa8.3□□□□□ -1.08
APP-216ENST00000491395 BZW2Q9Y6E2 419 aaKnown RBP8.3□□□□□ -1.08
APP-216ENST00000491395 RNF215Q9Y6U7 377 aa8.3□□□□□ -1.08
APP-216ENST00000491395 MYLKQ15746 1914 aa8.29□□□□□ -1.08
APP-216ENST00000491395 A0A1W2PQJ5 194 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms