RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 TCEA2Q15560 299 aa18.05■□□□□ 0.48
HMGN1-219ENST00000491183 CNGA3Q16281 694 aa18.05■□□□□ 0.48
HMGN1-219ENST00000491183 ANKRD20A8PQ5CZ79 823 aa18.05■□□□□ 0.48
HMGN1-219ENST00000491183 RALGPS1Q5JS13 557 aa18.05■□□□□ 0.48
HMGN1-219ENST00000491183 CRTC1Q6UUV9 634 aa18.05■□□□□ 0.48
HMGN1-219ENST00000491183 LRRC49Q8IUZ0 686 aa18.05■□□□□ 0.48
HMGN1-219ENST00000491183 VSTM4Q8IW00 320 aa18.05■□□□□ 0.48
HMGN1-219ENST00000491183 BBS5Q8N3I7 341 aa18.05■□□□□ 0.48
HMGN1-219ENST00000491183 FSTL5Q8N475 847 aaPredicted RBP18.05■□□□□ 0.48
HMGN1-219ENST00000491183 KCTD6Q8NC69 237 aa18.05■□□□□ 0.48
HMGN1-219ENST00000491183 NSMCE1Q8WV22 266 aa18.05■□□□□ 0.48
HMGN1-219ENST00000491183 OR1E3Q8WZA6 343 aa18.05■□□□□ 0.48
HMGN1-219ENST00000491183 LGR4Q9BXB1 951 aa18.05■□□□□ 0.48
HMGN1-219ENST00000491183 NT5MQ9NPB1 228 aa18.05■□□□□ 0.48
HMGN1-219ENST00000491183 KLQ9UEF7 1012 aa18.05■□□□□ 0.48
HMGN1-219ENST00000491183 PHTF1Q9UMS5 762 aa18.05■□□□□ 0.48
HMGN1-219ENST00000491183 HEXIM1O94992 359 aaKnown RBP18.04■□□□□ 0.48
HMGN1-219ENST00000491183 PGLSO95336 258 aa18.04■□□□□ 0.48
HMGN1-219ENST00000491183 TNFP01375 233 aa18.04■□□□□ 0.48
HMGN1-219ENST00000491183 HOXC4P09017 264 aaPredicted RBP18.04■□□□□ 0.48
HMGN1-219ENST00000491183 VIPR1P32241 457 aa18.04■□□□□ 0.48
HMGN1-219ENST00000491183 EIF2S3P41091 472 aaKnown RBP18.04■□□□□ 0.48
HMGN1-219ENST00000491183 GARSP41250 739 aaKnown RBP18.04■□□□□ 0.48
HMGN1-219ENST00000491183 RPIAP49247 311 aa18.04■□□□□ 0.48
HMGN1-219ENST00000491183 KIAA1024LP59773 190 aa18.04■□□□□ 0.48
HMGN1-219ENST00000491183 TRIM14Q14142 442 aa18.04■□□□□ 0.48
HMGN1-219ENST00000491183 PDK2Q15119 407 aa18.04■□□□□ 0.48
HMGN1-219ENST00000491183 ESRP1Q6NXG1 681 aaKnown RBP18.04■□□□□ 0.48
HMGN1-219ENST00000491183 PNCKQ6P2M8 343 aa18.04■□□□□ 0.48
HMGN1-219ENST00000491183 LVRNQ6Q4G3 990 aa18.04■□□□□ 0.48
HMGN1-219ENST00000491183 PQLC3Q8N755 202 aa18.04■□□□□ 0.48
HMGN1-219ENST00000491183 MAML1Q92585 1016 aa18.04■□□□□ 0.48
HMGN1-219ENST00000491183 GLMNQ92990 594 aa18.04■□□□□ 0.48
HMGN1-219ENST00000491183 FAF2Q96CS3 445 aa18.04■□□□□ 0.48
HMGN1-219ENST00000491183 SCRN2Q96FV2 425 aa18.04■□□□□ 0.48
HMGN1-219ENST00000491183 PDXPQ96GD0 296 aa18.04■□□□□ 0.48
HMGN1-219ENST00000491183 DCBLD2Q96PD2 775 aa18.04■□□□□ 0.48
HMGN1-219ENST00000491183 DEPDC7Q96QD5 511 aa18.04■□□□□ 0.48
HMGN1-219ENST00000491183 RBM15Q96T37 977 aaKnown RBP eCLIP18.04■□□□□ 0.48
HMGN1-219ENST00000491183 SEMA3CQ99985 751 aa18.04■□□□□ 0.48
HMGN1-219ENST00000491183 ZNF670Q9BS34 389 aa18.04■□□□□ 0.48
HMGN1-219ENST00000491183 TSPY26PQ9H489 355 aa18.04■□□□□ 0.48
HMGN1-219ENST00000491183 FGF22Q9HCT0 170 aa18.04■□□□□ 0.48
HMGN1-219ENST00000491183 MRPL40Q9NQ50 206 aaKnown RBP18.04■□□□□ 0.48
HMGN1-219ENST00000491183 GULP1Q9UBP9 304 aa18.04■□□□□ 0.48
HMGN1-219ENST00000491183 PADI4Q9UM07 663 aa18.04■□□□□ 0.48
HMGN1-219ENST00000491183 PPIL1Q9Y3C6 166 aa18.04■□□□□ 0.48
HMGN1-219ENST00000491183 DGKBQ9Y6T7 804 aa18.04■□□□□ 0.48
HMGN1-219ENST00000491183 FZD6O60353 706 aa18.03■□□□□ 0.48
HMGN1-219ENST00000491183 PDHA1P08559 390 aa18.03■□□□□ 0.48
HMGN1-219ENST00000491183 ALPIP09923 528 aa18.03■□□□□ 0.48
HMGN1-219ENST00000491183 TMEM253P0C7T8 217 aa18.03■□□□□ 0.48
HMGN1-219ENST00000491183 LHCGRP22888 699 aa18.03■□□□□ 0.48
HMGN1-219ENST00000491183 SLC10A2Q12908 348 aaPredicted RBP18.03■□□□□ 0.48
HMGN1-219ENST00000491183 ISXQ2M1V0 245 aa18.03■□□□□ 0.48
HMGN1-219ENST00000491183 HSD11B1LQ7Z5J1 315 aa18.03■□□□□ 0.48
HMGN1-219ENST00000491183 PDZD3Q86UT5 571 aa18.03■□□□□ 0.48
HMGN1-219ENST00000491183 SDR16C5Q8N3Y7 309 aa18.03■□□□□ 0.48
HMGN1-219ENST00000491183 RNF214Q8ND24 703 aa18.03■□□□□ 0.48
HMGN1-219ENST00000491183 OR56A4Q8NGH8 313 aa18.03■□□□□ 0.48
HMGN1-219ENST00000491183 ATL2Q8NHH9 583 aa18.03■□□□□ 0.48
HMGN1-219ENST00000491183 SLC35G2Q8TBE7 412 aa18.03■□□□□ 0.48
HMGN1-219ENST00000491183 LRRN4Q8WUT4 740 aa18.03■□□□□ 0.48
HMGN1-219ENST00000491183 PIH1D2Q8WWB5 315 aa18.03■□□□□ 0.48
HMGN1-219ENST00000491183 CRELD1Q96HD1 420 aa18.03■□□□□ 0.48
HMGN1-219ENST00000491183 TSGA13Q96PP4 275 aa18.03■□□□□ 0.48
HMGN1-219ENST00000491183 SMIM14Q96QK8 99 aa18.03■□□□□ 0.48
HMGN1-219ENST00000491183 DEF6Q9H4E7 631 aa18.03■□□□□ 0.48
HMGN1-219ENST00000491183 ABHD10Q9NUJ1 306 aa18.03■□□□□ 0.48
HMGN1-219ENST00000491183 DOLKQ9UPQ8 538 aa18.03■□□□□ 0.48
HMGN1-219ENST00000491183 RAI2Q9Y5P3 530 aa18.03■□□□□ 0.48
HMGN1-219ENST00000491183 ZFYVE26Q68DK2 2539 aa18.03■□□□□ 0.48
HMGN1-219ENST00000491183 A0A0U1RQS6 177 aa18.02■□□□□ 0.48
HMGN1-219ENST00000491183 NPIPB15A6NHN6 443 aaPredicted RBP18.02■□□□□ 0.48
HMGN1-219ENST00000491183 CACNB4O00305 520 aaPredicted RBP18.02■□□□□ 0.48
HMGN1-219ENST00000491183 MATN3O15232 486 aa18.02■□□□□ 0.48
HMGN1-219ENST00000491183 AKR1B10O60218 316 aa18.02■□□□□ 0.48
HMGN1-219ENST00000491183 USP12O75317 370 aa18.02■□□□□ 0.48
HMGN1-219ENST00000491183 MPOP05164 745 aa18.02■□□□□ 0.48
HMGN1-219ENST00000491183 KRT7P08729 469 aa18.02■□□□□ 0.48
HMGN1-219ENST00000491183 HOXB3P14651 431 aaPredicted RBP18.02■□□□□ 0.48
HMGN1-219ENST00000491183 CTPS1P17812 591 aa18.02■□□□□ 0.48
HMGN1-219ENST00000491183 CCNCP24863 283 aa18.02■□□□□ 0.48
HMGN1-219ENST00000491183 ITPKBP27987 946 aa18.02■□□□□ 0.48
HMGN1-219ENST00000491183 MAN1A1P33908 653 aa18.02■□□□□ 0.48
HMGN1-219ENST00000491183 GBE1Q04446 702 aa18.02■□□□□ 0.48
HMGN1-219ENST00000491183 ITKQ08881 620 aa18.02■□□□□ 0.48
HMGN1-219ENST00000491183 MESDQ14696 234 aa18.02■□□□□ 0.48
HMGN1-219ENST00000491183 IFI16Q16666 785 aaKnown RBP18.02■□□□□ 0.48
HMGN1-219ENST00000491183 ARMC12Q5T9G4 340 aa18.02■□□□□ 0.48
HMGN1-219ENST00000491183 DENND2CQ68D51 928 aa18.02■□□□□ 0.48
HMGN1-219ENST00000491183 TSPAN33Q86UF1 283 aa18.02■□□□□ 0.48
HMGN1-219ENST00000491183 MAP7D3Q8IWC1 876 aa18.02■□□□□ 0.48
HMGN1-219ENST00000491183 KYQ8NBH2 561 aa18.02■□□□□ 0.48
HMGN1-219ENST00000491183 SNIP1Q8TAD8 396 aaKnown RBP18.02■□□□□ 0.48
HMGN1-219ENST00000491183 RAPGEF5Q92565 580 aa18.02■□□□□ 0.48
HMGN1-219ENST00000491183 FGF11Q92914 225 aa18.02■□□□□ 0.48
HMGN1-219ENST00000491183 NAT6Q93015 286 aa18.02■□□□□ 0.48
HMGN1-219ENST00000491183 MCCC1Q96RQ3 725 aaPredicted RBP18.02■□□□□ 0.48
HMGN1-219ENST00000491183 SPTLC3Q9NUV7 552 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms