RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 PRR5-ARHGAP8B1AHC4 643 aa22.9■■□□□ 1.26
USF3-203ENST00000491165 MAP3K7O43318 606 aa22.9■■□□□ 1.26
USF3-203ENST00000491165 ADH5P11766 374 aa22.9■■□□□ 1.26
USF3-203ENST00000491165 NDST2P52849 883 aa22.9■■□□□ 1.26
USF3-203ENST00000491165 ARHGAP8P85298 464 aa22.9■■□□□ 1.26
USF3-203ENST00000491165 GNA12Q03113 381 aa22.9■■□□□ 1.26
USF3-203ENST00000491165 MBLAC2Q68D91 279 aa22.9■■□□□ 1.26
USF3-203ENST00000491165 LRRC8BQ6P9F7 803 aa22.9■■□□□ 1.26
USF3-203ENST00000491165 SETD3Q86TU7 594 aaPredicted RBP22.9■■□□□ 1.26
USF3-203ENST00000491165 APLFQ8IW19 511 aaPredicted RBP22.9■■□□□ 1.26
USF3-203ENST00000491165 UNC5BQ8IZJ1 945 aa22.9■■□□□ 1.26
USF3-203ENST00000491165 ATP2A3Q93084 1043 aa22.9■■□□□ 1.26
USF3-203ENST00000491165 ALG14Q96F25 216 aa22.9■■□□□ 1.26
USF3-203ENST00000491165 LMLNQ96KR4 655 aa22.9■■□□□ 1.26
USF3-203ENST00000491165 EBF4Q9BQW3 602 aa22.9■■□□□ 1.26
USF3-203ENST00000491165 C1orf21Q9H246 121 aa22.9■■□□□ 1.26
USF3-203ENST00000491165 MYO18AQ92614 2054 aaKnown RBP22.89■■□□□ 1.26
USF3-203ENST00000491165 GSRP00390 522 aa22.89■■□□□ 1.25
USF3-203ENST00000491165 RHOCP08134 193 aa22.89■■□□□ 1.25
USF3-203ENST00000491165 CSKP41240 450 aa22.89■■□□□ 1.25
USF3-203ENST00000491165 MXRA7P84157 204 aa22.89■■□□□ 1.25
USF3-203ENST00000491165 LMAN2Q12907 356 aa22.89■■□□□ 1.25
USF3-203ENST00000491165 N4BP2L1Q5TBK1 243 aaPredicted RBP22.89■■□□□ 1.25
USF3-203ENST00000491165 TMEM154Q6P9G4 183 aa22.89■■□□□ 1.25
USF3-203ENST00000491165 PACS1Q6VY07 963 aa22.89■■□□□ 1.25
USF3-203ENST00000491165 YAF2Q8IY57 180 aa22.89■■□□□ 1.25
USF3-203ENST00000491165 PIWIL2Q8TC59 973 aaKnown RBP22.89■■□□□ 1.25
USF3-203ENST00000491165 THTPAQ9BU02 230 aa22.89■■□□□ 1.25
USF3-203ENST00000491165 INTS6Q9UL03 887 aaKnown RBP22.89■■□□□ 1.25
USF3-203ENST00000491165 OR51B4Q9Y5P0 310 aa22.89■■□□□ 1.25
USF3-203ENST00000491165 WASF2Q9Y6W5 498 aa22.89■■□□□ 1.25
USF3-203ENST00000491165 J3KR12 359 aa22.88■■□□□ 1.25
USF3-203ENST00000491165 TPP1O14773 563 aa22.88■■□□□ 1.25
USF3-203ENST00000491165 MAFKO60675 156 aa22.88■■□□□ 1.25
USF3-203ENST00000491165 ALDOAP04075 364 aaKnown RBP22.88■■□□□ 1.25
USF3-203ENST00000491165 AOC1P19801 751 aa22.88■■□□□ 1.25
USF3-203ENST00000491165 NAB1Q13506 487 aa22.88■■□□□ 1.25
USF3-203ENST00000491165 RUNX3Q13761 415 aa22.88■■□□□ 1.25
USF3-203ENST00000491165 UBAP2LQ14157 1087 aaKnown RBP22.88■■□□□ 1.25
USF3-203ENST00000491165 RNF219Q5W0B1 726 aaPredicted RBP22.88■■□□□ 1.25
USF3-203ENST00000491165 C16orf46Q6P387 395 aa22.88■■□□□ 1.25
USF3-203ENST00000491165 RIPOR1Q6ZS17 1223 aa22.88■■□□□ 1.25
USF3-203ENST00000491165 CCNJLQ8IV13 435 aa22.88■■□□□ 1.25
USF3-203ENST00000491165 APCDD1Q8J025 514 aa22.88■■□□□ 1.25
USF3-203ENST00000491165 CCNYQ8ND76 341 aa22.88■■□□□ 1.25
USF3-203ENST00000491165 FIBINQ8TAL6 211 aa22.88■■□□□ 1.25
USF3-203ENST00000491165 HDAC11Q96DB2 347 aa22.88■■□□□ 1.25
USF3-203ENST00000491165 STN1Q9H668 368 aaKnown RBP22.88■■□□□ 1.25
USF3-203ENST00000491165 SLC24A3Q9HC58 644 aa22.88■■□□□ 1.25
USF3-203ENST00000491165 EIF2B3Q9NR50 452 aaKnown RBP22.88■■□□□ 1.25
USF3-203ENST00000491165 ABCB8Q9NUT2 735 aa22.88■■□□□ 1.25
USF3-203ENST00000491165 EMCNQ9ULC0 261 aa22.88■■□□□ 1.25
USF3-203ENST00000491165 F5H423 210 aaPredicted RBP22.88■■□□□ 1.25
USF3-203ENST00000491165 STK10O94804 968 aaKnown RBP22.88■■□□□ 1.25
USF3-203ENST00000491165 NFATC1O95644 943 aa22.88■■□□□ 1.25
USF3-203ENST00000491165 PGAM1P18669 254 aa22.88■■□□□ 1.25
USF3-203ENST00000491165 CRADDP78560 199 aa22.88■■□□□ 1.25
USF3-203ENST00000491165 PPIDQ08752 370 aaKnown RBP22.88■■□□□ 1.25
USF3-203ENST00000491165 PDGFRLQ15198 375 aa22.88■■□□□ 1.25
USF3-203ENST00000491165 FEM1AQ9BSK4 669 aa22.88■■□□□ 1.25
USF3-203ENST00000491165 CEP41Q9BYV8 373 aa22.88■■□□□ 1.25
USF3-203ENST00000491165 VCXQ9H320 206 aa22.88■■□□□ 1.25
USF3-203ENST00000491165 SLC17A6Q9P2U8 582 aa22.88■■□□□ 1.25
USF3-203ENST00000491165 DCDC2Q9UHG0 476 aa22.88■■□□□ 1.25
USF3-203ENST00000491165 DNAJC16Q9Y2G8 782 aa22.88■■□□□ 1.25
USF3-203ENST00000491165 TCF20Q9UGU0 1960 aaKnown RBP22.87■■□□□ 1.25
USF3-203ENST00000491165 ILVBLA1L0T0 632 aa22.87■■□□□ 1.25
USF3-203ENST00000491165 KCNK1O00180 336 aa22.87■■□□□ 1.25
USF3-203ENST00000491165 HOXC11O43248 304 aaPredicted RBP22.87■■□□□ 1.25
USF3-203ENST00000491165 FGF3P11487 239 aaPredicted RBP22.87■■□□□ 1.25
USF3-203ENST00000491165 SLC1A6P48664 564 aa22.87■■□□□ 1.25
USF3-203ENST00000491165 ACTR3P61158 418 aa22.87■■□□□ 1.25
USF3-203ENST00000491165 SERINC3Q13530 473 aa22.87■■□□□ 1.25
USF3-203ENST00000491165 PDE1CQ14123 709 aaPredicted RBP22.87■■□□□ 1.25
USF3-203ENST00000491165 ETFBKMTQ8IXQ9 262 aa22.87■■□□□ 1.25
USF3-203ENST00000491165 SLC44A3Q8N4M1 653 aa22.87■■□□□ 1.25
USF3-203ENST00000491165 CLPTM1LQ96KA5 538 aa22.87■■□□□ 1.25
USF3-203ENST00000491165 PANX3Q96QZ0 392 aa22.87■■□□□ 1.25
USF3-203ENST00000491165 RETREG1Q9H6L5 497 aa22.87■■□□□ 1.25
USF3-203ENST00000491165 SLC7A8Q9UHI5 535 aa22.87■■□□□ 1.25
USF3-203ENST00000491165 CACNG3O60359 315 aa22.87■■□□□ 1.25
USF3-203ENST00000491165 PLIN3O60664 434 aa22.87■■□□□ 1.25
USF3-203ENST00000491165 LYPLA1O75608 230 aaPredicted RBP22.87■■□□□ 1.25
USF3-203ENST00000491165 ADH1CP00326 375 aa22.87■■□□□ 1.25
USF3-203ENST00000491165 SLC6A11P48066 632 aa22.87■■□□□ 1.25
USF3-203ENST00000491165 SOX9P48436 509 aa22.87■■□□□ 1.25
USF3-203ENST00000491165 CCNHP51946 323 aaPredicted RBP22.87■■□□□ 1.25
USF3-203ENST00000491165 SESN2P58004 480 aaPredicted RBP22.87■■□□□ 1.25
USF3-203ENST00000491165 PDK1Q15118 436 aa22.87■■□□□ 1.25
USF3-203ENST00000491165 PARP15Q460N3 678 aa22.87■■□□□ 1.25
USF3-203ENST00000491165 IER5LQ5T953 404 aa22.87■■□□□ 1.25
USF3-203ENST00000491165 TEDDM1Q5T9Z0 273 aa22.87■■□□□ 1.25
USF3-203ENST00000491165 ZNF778Q96MU6 729 aa22.87■■□□□ 1.25
USF3-203ENST00000491165 ZNF184Q99676 751 aaPredicted RBP22.87■■□□□ 1.25
USF3-203ENST00000491165 MUC3BQ9H195 1237 aa22.87■■□□□ 1.25
USF3-203ENST00000491165 FBXO10Q9UK96 956 aa22.87■■□□□ 1.25
USF3-203ENST00000491165 ITM2AO43736 263 aa22.86■■□□□ 1.25
USF3-203ENST00000491165 SNAP91O60641 907 aa22.86■■□□□ 1.25
USF3-203ENST00000491165 OPHN1O60890 802 aa22.86■■□□□ 1.25
USF3-203ENST00000491165 PEX11BO96011 259 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms