RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 H2AFVQ71UI9 128 aa10.39□□□□□ -0.75
RBM39-236ENST00000490484 SLC35F3Q8IY50 421 aa10.39□□□□□ -0.75
RBM39-236ENST00000490484 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.39□□□□□ -0.75
RBM39-236ENST00000490484 KYQ8NBH2 561 aa10.39□□□□□ -0.75
RBM39-236ENST00000490484 ATL2Q8NHH9 583 aa10.39□□□□□ -0.75
RBM39-236ENST00000490484 FAM71BQ8TC56 605 aa10.39□□□□□ -0.75
RBM39-236ENST00000490484 LRRN4Q8WUT4 740 aa10.39□□□□□ -0.75
RBM39-236ENST00000490484 FUBP1Q96AE4 644 aaKnown RBP10.39□□□□□ -0.75
RBM39-236ENST00000490484 NUS1Q96E22 293 aa10.39□□□□□ -0.75
RBM39-236ENST00000490484 WDR92Q96MX6 357 aa10.39□□□□□ -0.75
RBM39-236ENST00000490484 DEPDC7Q96QD5 511 aa10.39□□□□□ -0.75
RBM39-236ENST00000490484 NRSN2Q9GZP1 204 aa10.39□□□□□ -0.75
RBM39-236ENST00000490484 WDR26Q9H7D7 661 aa10.39□□□□□ -0.75
RBM39-236ENST00000490484 SYNDIG1Q9H7V2 258 aa10.39□□□□□ -0.75
RBM39-236ENST00000490484 FGF22Q9HCT0 170 aa10.39□□□□□ -0.75
RBM39-236ENST00000490484 NT5MQ9NPB1 228 aa10.39□□□□□ -0.75
RBM39-236ENST00000490484 SPTLC3Q9NUV7 552 aa10.39□□□□□ -0.75
RBM39-236ENST00000490484 SALL4Q9UJQ4 1053 aa10.39□□□□□ -0.75
RBM39-236ENST00000490484 KNTC1P50748 2209 aa10.39□□□□□ -0.75
RBM39-236ENST00000490484 SSU72P8A0A1W2PR75 194 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 GOLGA6CA6NDK9 693 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 GOLGA6BA6NDN3 693 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 TMEM202A6NGA9 273 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 HEXIM1O94992 359 aaKnown RBP10.38□□□□□ -0.75
RBM39-236ENST00000490484 PGLSO95336 258 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 KRT7P08729 469 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 ALPIP09923 528 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 TMEM253P0C7T8 217 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 GOLGA6DP0CG33 693 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 CTPS1P17812 591 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 TGM2P21980 687 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 LHCGRP22888 699 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 VIPR1P32241 457 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 MAN1A1P33908 653 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 RPIAP49247 311 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 KIAA1024LP59773 190 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 GBE1Q04446 702 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 MESDQ14696 234 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 RTP5Q14D33 572 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 PAFAH1B3Q15102 231 aaKnown RBP10.38□□□□□ -0.75
RBM39-236ENST00000490484 PDK2Q15119 407 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 PTPRRQ15256 657 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 TSR1Q2NL82 804 aaKnown RBP10.38□□□□□ -0.75
RBM39-236ENST00000490484 RALGPS1Q5JS13 557 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 PERM1Q5SV97 790 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 ARMC12Q5T9G4 340 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 TIGD7Q6NT04 549 aaPredicted RBP10.38□□□□□ -0.75
RBM39-236ENST00000490484 ESRP1Q6NXG1 681 aaKnown RBP10.38□□□□□ -0.75
RBM39-236ENST00000490484 CACTIN-AS1Q8N1I8 211 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 PELI3Q8N2H9 469 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 FSTL5Q8N475 847 aaPredicted RBP10.38□□□□□ -0.75
RBM39-236ENST00000490484 ARL10Q8N8L6 244 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 OR56A4Q8NGH8 313 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 OR1E3Q8WZA6 343 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 SPOCK2Q92563 424 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 GLMNQ92990 594 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 NAT6Q93015 286 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 CHP1Q99653 195 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 SEMA3CQ99985 751 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 POLR1EQ9GZS1 481 aaKnown RBP10.38□□□□□ -0.75
RBM39-236ENST00000490484 SUDS3Q9H7L9 328 aaPredicted RBP10.38□□□□□ -0.75
RBM39-236ENST00000490484 MRPL40Q9NQ50 206 aaKnown RBP10.38□□□□□ -0.75
RBM39-236ENST00000490484 GOLGA6AQ9NYA3 693 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 GULP1Q9UBP9 304 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 LCMT1Q9UIC8 334 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 ADAMTS20P59510 1910 aa10.38□□□□□ -0.75
RBM39-236ENST00000490484 COL27A1Q8IZC6 1860 aaPredicted RBP10.38□□□□□ -0.75
RBM39-236ENST00000490484 CACNA1GO43497 2377 aa10.37□□□□□ -0.75
RBM39-236ENST00000490484 A0A087WV48 116 aa10.37□□□□□ -0.75
RBM39-236ENST00000490484 A0A0U1RQS6 177 aa10.37□□□□□ -0.75
RBM39-236ENST00000490484 A0A1W2PQ67 120 aa10.37□□□□□ -0.75
RBM39-236ENST00000490484 LRRD1A4D1F6 860 aa10.37□□□□□ -0.75
RBM39-236ENST00000490484 EME2A4GXA9 379 aaPredicted RBP10.37□□□□□ -0.75
RBM39-236ENST00000490484 CASC3O15234 703 aaKnown RBP10.37□□□□□ -0.75
RBM39-236ENST00000490484 TLX3O43711 291 aaPredicted RBP10.37□□□□□ -0.75
RBM39-236ENST00000490484 USP12O75317 370 aa10.37□□□□□ -0.75
RBM39-236ENST00000490484 MPOP05164 745 aa10.37□□□□□ -0.75
RBM39-236ENST00000490484 CYP2A6P11509 494 aaPredicted RBP10.37□□□□□ -0.75
RBM39-236ENST00000490484 MYCLP1P12525 358 aaPredicted RBP10.37□□□□□ -0.75
RBM39-236ENST00000490484 KELP23276 732 aa10.37□□□□□ -0.75
RBM39-236ENST00000490484 NFKBIAP25963 317 aa10.37□□□□□ -0.75
RBM39-236ENST00000490484 ETV3P41162 512 aa10.37□□□□□ -0.75
RBM39-236ENST00000490484 GABREP78334 506 aa10.37□□□□□ -0.75
RBM39-236ENST00000490484 DSC2Q02487 901 aa10.37□□□□□ -0.75
RBM39-236ENST00000490484 ARHGEF7Q14155 803 aa10.37□□□□□ -0.75
RBM39-236ENST00000490484 PNCKQ6P2M8 343 aa10.37□□□□□ -0.75
RBM39-236ENST00000490484 USP45Q70EL2 814 aa10.37□□□□□ -0.75
RBM39-236ENST00000490484 HSD11B1LQ7Z5J1 315 aa10.37□□□□□ -0.75
RBM39-236ENST00000490484 TSPAN33Q86UF1 283 aa10.37□□□□□ -0.75
RBM39-236ENST00000490484 HEATR4Q86WZ0 1026 aa10.37□□□□□ -0.75
RBM39-236ENST00000490484 GKN2Q86XP6 184 aa10.37□□□□□ -0.75
RBM39-236ENST00000490484 LRRC49Q8IUZ0 686 aa10.37□□□□□ -0.75
RBM39-236ENST00000490484 MAP7D3Q8IWC1 876 aa10.37□□□□□ -0.75
RBM39-236ENST00000490484 TEX26Q8N6G2 289 aa10.37□□□□□ -0.75
RBM39-236ENST00000490484 PQLC3Q8N755 202 aa10.37□□□□□ -0.75
RBM39-236ENST00000490484 SLC35G2Q8TBE7 412 aa10.37□□□□□ -0.75
RBM39-236ENST00000490484 SCG3Q8WXD2 468 aaKnown RBP10.37□□□□□ -0.75
RBM39-236ENST00000490484 RAPGEF5Q92565 580 aa10.37□□□□□ -0.75
RBM39-236ENST00000490484 FAF2Q96CS3 445 aa10.37□□□□□ -0.75
RBM39-236ENST00000490484 DTD2Q96FN9 168 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms