RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 ZNF135P52742 658 aaPredicted RBP17.84■□□□□ 0.45
YIPF3-208ENST00000490447 ZNF235Q14590 738 aa17.84■□□□□ 0.45
YIPF3-208ENST00000490447 TSR1Q2NL82 804 aaKnown RBP17.84■□□□□ 0.45
YIPF3-208ENST00000490447 C14orf28Q4W4Y0 310 aa17.84■□□□□ 0.45
YIPF3-208ENST00000490447 CLEC17AQ6ZS10 378 aa17.84■□□□□ 0.45
YIPF3-208ENST00000490447 KIAA1524Q8TCG1 905 aa17.84■□□□□ 0.45
YIPF3-208ENST00000490447 TMEM159Q96B96 161 aa17.84■□□□□ 0.45
YIPF3-208ENST00000490447 MED8Q96G25 268 aa17.84■□□□□ 0.45
YIPF3-208ENST00000490447 SEMA4CQ9C0C4 833 aa17.84■□□□□ 0.45
YIPF3-208ENST00000490447 TMEM168Q9H0V1 697 aa17.84■□□□□ 0.45
YIPF3-208ENST00000490447 ZWILCHQ9H900 591 aa17.84■□□□□ 0.45
YIPF3-208ENST00000490447 CYP4F12Q9HCS2 524 aa17.84■□□□□ 0.45
YIPF3-208ENST00000490447 LRIT1Q9P2V4 623 aa17.84■□□□□ 0.45
YIPF3-208ENST00000490447 MYO6Q9UM54 1294 aa17.84■□□□□ 0.45
YIPF3-208ENST00000490447 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.83■□□□□ 0.44
YIPF3-208ENST00000490447 A8MX80 341 aa17.83■□□□□ 0.44
YIPF3-208ENST00000490447 B8ZZF3 427 aa17.83■□□□□ 0.44
YIPF3-208ENST00000490447 TEX33O43247 280 aa17.83■□□□□ 0.44
YIPF3-208ENST00000490447 HOXC4P09017 264 aaPredicted RBP17.83■□□□□ 0.44
YIPF3-208ENST00000490447 LBRQ14739 615 aaKnown RBP17.83■□□□□ 0.44
YIPF3-208ENST00000490447 AFMIDQ63HM1 303 aa17.83■□□□□ 0.44
YIPF3-208ENST00000490447 KCTD16Q68DU8 428 aa17.83■□□□□ 0.44
YIPF3-208ENST00000490447 PLEKHA7Q6IQ23 1121 aa17.83■□□□□ 0.44
YIPF3-208ENST00000490447 OGFOD3Q6PK18 319 aa17.83■□□□□ 0.44
YIPF3-208ENST00000490447 ARHGAP36Q6ZRI8 547 aa17.83■□□□□ 0.44
YIPF3-208ENST00000490447 IRF2BP2Q7Z5L9 587 aa17.83■□□□□ 0.44
YIPF3-208ENST00000490447 SPRED1Q7Z699 444 aa17.83■□□□□ 0.44
YIPF3-208ENST00000490447 PSTKQ8IV42 348 aaKnown RBP17.83■□□□□ 0.44
YIPF3-208ENST00000490447 ARHGAP12Q8IWW6 846 aa17.83■□□□□ 0.44
YIPF3-208ENST00000490447 LZTR1Q8N653 840 aa17.83■□□□□ 0.44
YIPF3-208ENST00000490447 PDCD6IPQ8WUM4 868 aaKnown RBP17.83■□□□□ 0.44
YIPF3-208ENST00000490447 NUS1Q96E22 293 aa17.83■□□□□ 0.44
YIPF3-208ENST00000490447 GBP4Q96PP9 640 aa17.83■□□□□ 0.44
YIPF3-208ENST00000490447 PEBP4Q96S96 227 aa17.83■□□□□ 0.44
YIPF3-208ENST00000490447 CMKLR1Q99788 373 aa17.83■□□□□ 0.44
YIPF3-208ENST00000490447 SEPT10Q9P0V9 454 aa17.83■□□□□ 0.44
YIPF3-208ENST00000490447 ASH1LQ9NR48 2969 aaKnown RBP17.83■□□□□ 0.44
YIPF3-208ENST00000490447 A0A1W2PQ67 120 aa17.82■□□□□ 0.44
YIPF3-208ENST00000490447 PRSS38A1L453 326 aa17.82■□□□□ 0.44
YIPF3-208ENST00000490447 TRAFD1O14545 582 aaPredicted RBP17.82■□□□□ 0.44
YIPF3-208ENST00000490447 NUDT21O43809 227 aaKnown RBP17.82■□□□□ 0.44
YIPF3-208ENST00000490447 LIPCP11150 499 aa17.82■□□□□ 0.44
YIPF3-208ENST00000490447 MIPP30301 263 aa17.82■□□□□ 0.44
YIPF3-208ENST00000490447 TRIM23P36406 574 aa17.82■□□□□ 0.44
YIPF3-208ENST00000490447 BIRC2Q13490 618 aa17.82■□□□□ 0.44
YIPF3-208ENST00000490447 HLTFQ14527 1009 aaKnown RBP eCLIP17.82■□□□□ 0.44
YIPF3-208ENST00000490447 ASIC2Q16515 512 aa17.82■□□□□ 0.44
YIPF3-208ENST00000490447 MAP9Q49MG5 647 aa17.82■□□□□ 0.44
YIPF3-208ENST00000490447 TMCO4Q5TGY1 634 aa17.82■□□□□ 0.44
YIPF3-208ENST00000490447 SPECC1LQ69YQ0 1117 aa17.82■□□□□ 0.44
YIPF3-208ENST00000490447 PNCKQ6P2M8 343 aa17.82■□□□□ 0.44
YIPF3-208ENST00000490447 USP53Q70EK8 1073 aa17.82■□□□□ 0.44
YIPF3-208ENST00000490447 BBS5Q8N3I7 341 aa17.82■□□□□ 0.44
YIPF3-208ENST00000490447 NPWQ8N729 165 aa17.82■□□□□ 0.44
YIPF3-208ENST00000490447 ZNF599Q96NL3 588 aa17.82■□□□□ 0.44
YIPF3-208ENST00000490447 PSKH2Q96QS6 385 aa17.82■□□□□ 0.44
YIPF3-208ENST00000490447 LGR4Q9BXB1 951 aa17.82■□□□□ 0.44
YIPF3-208ENST00000490447 CARS2Q9HA77 564 aaKnown RBP17.82■□□□□ 0.44
YIPF3-208ENST00000490447 KCTD5Q9NXV2 234 aa17.82■□□□□ 0.44
YIPF3-208ENST00000490447 AKAP7Q9P0M2 348 aaPredicted RBP17.82■□□□□ 0.44
YIPF3-208ENST00000490447 B4GALT6Q9UBX8 382 aa17.82■□□□□ 0.44
YIPF3-208ENST00000490447 ACSL6Q9UKU0 697 aa17.82■□□□□ 0.44
YIPF3-208ENST00000490447 SCINQ9Y6U3 715 aa17.82■□□□□ 0.44
YIPF3-208ENST00000490447 RNF215Q9Y6U7 377 aa17.82■□□□□ 0.44
YIPF3-208ENST00000490447 TMEM191CA6NGB0 347 aa17.81■□□□□ 0.44
YIPF3-208ENST00000490447 LRRC53A6NM62 1247 aa17.81■□□□□ 0.44
YIPF3-208ENST00000490447 AGRPO00253 132 aa17.81■□□□□ 0.44
YIPF3-208ENST00000490447 NVLO15381 856 aaKnown RBP17.81■□□□□ 0.44
YIPF3-208ENST00000490447 ZW10O43264 779 aa17.81■□□□□ 0.44
YIPF3-208ENST00000490447 NOBOXO60393 691 aa17.81■□□□□ 0.44
YIPF3-208ENST00000490447 MYCLP1P12525 358 aaPredicted RBP17.81■□□□□ 0.44
YIPF3-208ENST00000490447 ITIH1P19827 911 aa17.81■□□□□ 0.44
YIPF3-208ENST00000490447 PHF19Q5T6S3 580 aa17.81■□□□□ 0.44
YIPF3-208ENST00000490447 DENND2CQ68D51 928 aa17.81■□□□□ 0.44
YIPF3-208ENST00000490447 APTXQ7Z2E3 356 aaKnown RBP17.81■□□□□ 0.44
YIPF3-208ENST00000490447 AOPEPQ8N6M6 819 aa17.81■□□□□ 0.44
YIPF3-208ENST00000490447 ARFGAP1Q8N6T3 406 aa17.81■□□□□ 0.44
YIPF3-208ENST00000490447 FNIP1Q8TF40 1166 aa17.81■□□□□ 0.44
YIPF3-208ENST00000490447 ZNF653Q96CK0 615 aa17.81■□□□□ 0.44
YIPF3-208ENST00000490447 ARHGAP9Q9BRR9 750 aa17.81■□□□□ 0.44
YIPF3-208ENST00000490447 GSDMCQ9BYG8 508 aa17.81■□□□□ 0.44
YIPF3-208ENST00000490447 SUDS3Q9H7L9 328 aaPredicted RBP17.81■□□□□ 0.44
YIPF3-208ENST00000490447 PHPT1Q9NRX4 125 aaPredicted RBP17.81■□□□□ 0.44
YIPF3-208ENST00000490447 CNOT8Q9UFF9 292 aaKnown RBP17.81■□□□□ 0.44
YIPF3-208ENST00000490447 LRP4O75096 1905 aa17.81■□□□□ 0.44
YIPF3-208ENST00000490447 FLNBO75369 2602 aaKnown RBP17.81■□□□□ 0.44
YIPF3-208ENST00000490447 TENM4Q6N022 2769 aa17.8■□□□□ 0.44
YIPF3-208ENST00000490447 GOLGA6CA6NDK9 693 aa17.8■□□□□ 0.44
YIPF3-208ENST00000490447 GOLGA6BA6NDN3 693 aa17.8■□□□□ 0.44
YIPF3-208ENST00000490447 GOLGA6L22H0YM25 854 aa17.8■□□□□ 0.44
YIPF3-208ENST00000490447 H3BRJ5 948 aa17.8■□□□□ 0.44
YIPF3-208ENST00000490447 SOCS5O75159 536 aa17.8■□□□□ 0.44
YIPF3-208ENST00000490447 CPP00450 1065 aa17.8■□□□□ 0.44
YIPF3-208ENST00000490447 GOLGA6DP0CG33 693 aa17.8■□□□□ 0.44
YIPF3-208ENST00000490447 ATP1A3P13637 1013 aa17.8■□□□□ 0.44
YIPF3-208ENST00000490447 HSPA9P38646 679 aaKnown RBP17.8■□□□□ 0.44
YIPF3-208ENST00000490447 ARL4AP40617 200 aa17.8■□□□□ 0.44
YIPF3-208ENST00000490447 HCAR3P49019 387 aa17.8■□□□□ 0.44
YIPF3-208ENST00000490447 MAPK10P53779 464 aa17.8■□□□□ 0.44
YIPF3-208ENST00000490447 ZFP36L1Q07352 338 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms