RNA–Protein interactions for RNA: ENST00000489907.2

SMG5-205, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG5, Length 535 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-205ENST00000489907 PCDH12Q9NPG4 1184 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 MRPL40Q9NQ50 206 aaKnown RBP8.2□□□□□ -1.1
SMG5-205ENST00000489907 FAM207AQ9NSI2 230 aaPredicted RBP8.2□□□□□ -1.1
SMG5-205ENST00000489907 FOXJ2Q9P0K8 574 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 SIRPGQ9P1W8 387 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 IMPACTQ9P2X3 320 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 HPCAL4Q9UM19 191 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 GPR34Q9UPC5 381 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 RNF215Q9Y6U7 377 aa8.2□□□□□ -1.1
SMG5-205ENST00000489907 SPENQ96T58 3664 aaKnown RBP8.19□□□□□ -1.1
SMG5-205ENST00000489907 PRAMEF33A0A0G2JMD5 474 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 CFAP69A5D8W1 941 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 SIGLEC16A6NMB1 481 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 RASA4BC9J798 803 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 TRAFD1O14545 582 aaPredicted RBP8.19□□□□□ -1.1
SMG5-205ENST00000489907 RASA4O43374 803 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 PRAMEF10O60809 474 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 IGSF6O95976 241 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 TPM3P06753 285 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 TPM2P07951 284 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 HOXC4P09017 264 aaPredicted RBP8.19□□□□□ -1.1
SMG5-205ENST00000489907 CTSEP14091 401 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 SDC4P31431 198 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 MMP12P39900 470 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 PRKCIP41743 596 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 CSNK1DP48730 415 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 RHOAP61586 193 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 CYP4F2P78329 520 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 OGDHQ02218 1023 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 ELP6Q0PNE2 266 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 MTM1Q13496 603 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 CLCA4Q14CN2 919 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 C16orf72Q14CZ0 275 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 TCEA2Q15560 299 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 TBR1Q16650 682 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 ASTE1Q2TB18 679 aaPredicted RBP8.19□□□□□ -1.1
SMG5-205ENST00000489907 AFMIDQ63HM1 303 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 LIPIQ6XZB0 460 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 USP53Q70EK8 1073 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 RD3Q7Z3Z2 195 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 ZNF438Q7Z4V0 828 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 SPRED1Q7Z699 444 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 SLFN11Q7Z7L1 901 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 ZFAND4Q86XD8 727 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 GKN2Q86XP6 184 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 NRROSQ86YC3 692 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 CAMK1DQ8IU85 385 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 CCNJLQ8IV13 435 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 NEK11Q8NG66 645 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 OR6C4Q8NGE1 309 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 SCG3Q8WXD2 468 aaKnown RBP8.19□□□□□ -1.1
SMG5-205ENST00000489907 WDR92Q96MX6 357 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 ZNF641Q96N77 438 aaPredicted RBP8.19□□□□□ -1.1
SMG5-205ENST00000489907 C11orf70Q9BRQ4 267 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 C1QTNF7Q9BXJ2 289 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 SLC12A9Q9BXP2 914 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 B3GNT4Q9C0J1 378 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 TMEM168Q9H0V1 697 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 SEMA6CQ9H3T2 930 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 FZD10Q9ULW2 581 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 PCDHGA4Q9Y5G9 962 aa8.19□□□□□ -1.1
SMG5-205ENST00000489907 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.19□□□□□ -1.1
SMG5-205ENST00000489907 ZFC3H1O60293 1989 aaKnown RBP8.19□□□□□ -1.1
SMG5-205ENST00000489907 MAST4O15021 2626 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 AHCTF1Q8WYP5 2266 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 TMX2-CTNND1H3BSU7 103 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 PES1O00541 588 aaKnown RBP8.18□□□□□ -1.1
SMG5-205ENST00000489907 TNFRSF10CO14798 259 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 CCP110O43303 1012 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 MFAP3LO75121 409 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 RECQL5O94762 991 aaPredicted RBP8.18□□□□□ -1.1
SMG5-205ENST00000489907 GFPT2O94808 682 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 TNFP01375 233 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 PRKCGP05129 697 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 FAM87AP0C7U9 286 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 KRT3P12035 628 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 EPHB2P29323 1055 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 RPL7AP62424 266 aaKnown RBP8.18□□□□□ -1.1
SMG5-205ENST00000489907 RAD51Q06609 339 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 NR1D2Q14995 579 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 PARP15Q460N3 678 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 C14orf28Q4W4Y0 310 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 MON1BQ7L1V2 547 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 VASH2Q86V25 355 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 DNAAF5Q86Y56 855 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 PHF13Q86YI8 300 aaPredicted RBP8.18□□□□□ -1.1
SMG5-205ENST00000489907 ARHGAP12Q8IWW6 846 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 ARFGAP1Q8N6T3 406 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 EFCAB3Q8N7B9 438 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 Q8N9G6 341 aaPredicted RBP8.18□□□□□ -1.1
SMG5-205ENST00000489907 TSEN2Q8NCE0 465 aaKnown RBP8.18□□□□□ -1.1
SMG5-205ENST00000489907 OR8K1Q8NGG5 319 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 OR56A4Q8NGH8 313 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 GPBAR1Q8TDU6 330 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 CPLX3Q8WVH0 158 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 USP7Q93009 1102 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 PMEPA1Q969W9 287 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 TMEM159Q96B96 161 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 PANX2Q96RD6 677 aa8.18□□□□□ -1.1
SMG5-205ENST00000489907 SPRY4Q9C004 299 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms