RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 CFAP46Q8IYW2 2715 aa19.52■□□□□ 0.72
APTX-229ENST00000489583 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.52■□□□□ 0.72
APTX-229ENST00000489583 LGALS16A8MUM7 142 aa19.52■□□□□ 0.72
APTX-229ENST00000489583 EPHB6O15197 1021 aa19.52■□□□□ 0.72
APTX-229ENST00000489583 NUDT21O43809 227 aaKnown RBP19.52■□□□□ 0.72
APTX-229ENST00000489583 BUB1BO60566 1050 aaPredicted RBP19.52■□□□□ 0.72
APTX-229ENST00000489583 PRKCGP05129 697 aa19.52■□□□□ 0.72
APTX-229ENST00000489583 HOXC4P09017 264 aaPredicted RBP19.52■□□□□ 0.72
APTX-229ENST00000489583 KRT10P13645 584 aa19.52■□□□□ 0.72
APTX-229ENST00000489583 HGFP14210 728 aa19.52■□□□□ 0.72
APTX-229ENST00000489583 PPM1FP49593 454 aaPredicted RBP19.52■□□□□ 0.72
APTX-229ENST00000489583 ZNF135P52742 658 aaPredicted RBP19.52■□□□□ 0.72
APTX-229ENST00000489583 MAPK10P53779 464 aa19.52■□□□□ 0.72
APTX-229ENST00000489583 AP1S1P61966 158 aa19.52■□□□□ 0.72
APTX-229ENST00000489583 ILF3Q12906 894 aaKnown RBP eCLIP19.52■□□□□ 0.72
APTX-229ENST00000489583 ZNF235Q14590 738 aa19.52■□□□□ 0.72
APTX-229ENST00000489583 PPP6R3Q5H9R7 873 aaPredicted RBP19.52■□□□□ 0.72
APTX-229ENST00000489583 MCOLN2Q8IZK6 566 aa19.52■□□□□ 0.72
APTX-229ENST00000489583 TSEN2Q8NCE0 465 aaKnown RBP19.52■□□□□ 0.72
APTX-229ENST00000489583 NSMCE1Q8WV22 266 aa19.52■□□□□ 0.72
APTX-229ENST00000489583 SLC39A8Q9C0K1 460 aa19.52■□□□□ 0.72
APTX-229ENST00000489583 ZMYND15Q9H091 742 aa19.52■□□□□ 0.72
APTX-229ENST00000489583 PDFQ9HBH1 243 aa19.52■□□□□ 0.72
APTX-229ENST00000489583 PHPT1Q9NRX4 125 aaPredicted RBP19.52■□□□□ 0.72
APTX-229ENST00000489583 SEPT3Q9UH03 358 aa19.52■□□□□ 0.72
APTX-229ENST00000489583 ACSL6Q9UKU0 697 aa19.52■□□□□ 0.72
APTX-229ENST00000489583 CHD5Q8TDI0 1954 aa19.52■□□□□ 0.71
APTX-229ENST00000489583 A0A1W2PQM1 296 aa19.51■□□□□ 0.71
APTX-229ENST00000489583 GOLGA6CA6NDK9 693 aa19.51■□□□□ 0.71
APTX-229ENST00000489583 GOLGA6BA6NDN3 693 aa19.51■□□□□ 0.71
APTX-229ENST00000489583 AGRPO00253 132 aa19.51■□□□□ 0.71
APTX-229ENST00000489583 ITGB2P05107 769 aa19.51■□□□□ 0.71
APTX-229ENST00000489583 GOLGA6DP0CG33 693 aa19.51■□□□□ 0.71
APTX-229ENST00000489583 CD82P27701 267 aa19.51■□□□□ 0.71
APTX-229ENST00000489583 MYL5Q02045 173 aa19.51■□□□□ 0.71
APTX-229ENST00000489583 NFATC3Q12968 1075 aa19.51■□□□□ 0.71
APTX-229ENST00000489583 TMCO4Q5TGY1 634 aa19.51■□□□□ 0.71
APTX-229ENST00000489583 SPECC1LQ69YQ0 1117 aa19.51■□□□□ 0.71
APTX-229ENST00000489583 LIPIQ6XZB0 460 aa19.51■□□□□ 0.71
APTX-229ENST00000489583 RFX8Q6ZV50 586 aa19.51■□□□□ 0.71
APTX-229ENST00000489583 SPRED1Q7Z699 444 aa19.51■□□□□ 0.71
APTX-229ENST00000489583 LZTR1Q8N653 840 aa19.51■□□□□ 0.71
APTX-229ENST00000489583 PLA2G15Q8NCC3 412 aa19.51■□□□□ 0.71
APTX-229ENST00000489583 CCDC112Q8NEF3 446 aa19.51■□□□□ 0.71
APTX-229ENST00000489583 PDCD6IPQ8WUM4 868 aaKnown RBP19.51■□□□□ 0.71
APTX-229ENST00000489583 OR1E3Q8WZA6 343 aa19.51■□□□□ 0.71
APTX-229ENST00000489583 COL26A1Q96A83 441 aa19.51■□□□□ 0.71
APTX-229ENST00000489583 FUBP1Q96AE4 644 aaKnown RBP19.51■□□□□ 0.71
APTX-229ENST00000489583 VOPP1Q96AW1 172 aa19.51■□□□□ 0.71
APTX-229ENST00000489583 GSDMCQ9BYG8 508 aa19.51■□□□□ 0.71
APTX-229ENST00000489583 TMEM168Q9H0V1 697 aa19.51■□□□□ 0.71
APTX-229ENST00000489583 SUDS3Q9H7L9 328 aaPredicted RBP19.51■□□□□ 0.71
APTX-229ENST00000489583 ZWILCHQ9H900 591 aa19.51■□□□□ 0.71
APTX-229ENST00000489583 GPATCH2LQ9NWQ4 482 aa19.51■□□□□ 0.71
APTX-229ENST00000489583 GOLGA6AQ9NYA3 693 aa19.51■□□□□ 0.71
APTX-229ENST00000489583 PCSK1NQ9UHG2 260 aa19.51■□□□□ 0.71
APTX-229ENST00000489583 RNF215Q9Y6U7 377 aa19.51■□□□□ 0.71
APTX-229ENST00000489583 RP1P56715 2156 aa19.51■□□□□ 0.71
APTX-229ENST00000489583 PRSS38A1L453 326 aa19.5■□□□□ 0.71
APTX-229ENST00000489583 TMEM202A6NGA9 273 aa19.5■□□□□ 0.71
APTX-229ENST00000489583 A8MX80 341 aa19.5■□□□□ 0.71
APTX-229ENST00000489583 TMCO5BA8MYB1 307 aa19.5■□□□□ 0.71
APTX-229ENST00000489583 ALDH4A1P30038 563 aa19.5■□□□□ 0.71
APTX-229ENST00000489583 IL10RBQ08334 325 aa19.5■□□□□ 0.71
APTX-229ENST00000489583 AMZ1Q400G9 498 aa19.5■□□□□ 0.71
APTX-229ENST00000489583 PNCKQ6P2M8 343 aa19.5■□□□□ 0.71
APTX-229ENST00000489583 OGFOD3Q6PK18 319 aa19.5■□□□□ 0.71
APTX-229ENST00000489583 DPPA4Q7L190 304 aa19.5■□□□□ 0.71
APTX-229ENST00000489583 NUS1Q96E22 293 aa19.5■□□□□ 0.71
APTX-229ENST00000489583 NAT10Q9H0A0 1025 aaKnown RBP19.5■□□□□ 0.71
APTX-229ENST00000489583 CARS2Q9HA77 564 aaKnown RBP19.5■□□□□ 0.71
APTX-229ENST00000489583 MRPL40Q9NQ50 206 aaKnown RBP19.5■□□□□ 0.71
APTX-229ENST00000489583 ASH1LQ9NR48 2969 aaKnown RBP19.5■□□□□ 0.71
APTX-229ENST00000489583 CASC3O15234 703 aaKnown RBP19.49■□□□□ 0.71
APTX-229ENST00000489583 EFSO43281 561 aa19.49■□□□□ 0.71
APTX-229ENST00000489583 CPNE6O95741 557 aa19.49■□□□□ 0.71
APTX-229ENST00000489583 CYP2A6P11509 494 aaPredicted RBP19.49■□□□□ 0.71
APTX-229ENST00000489583 HSPA9P38646 679 aaKnown RBP19.49■□□□□ 0.71
APTX-229ENST00000489583 TYRO3Q06418 890 aa19.49■□□□□ 0.71
APTX-229ENST00000489583 DENND2CQ68D51 928 aa19.49■□□□□ 0.71
APTX-229ENST00000489583 PSTKQ8IV42 348 aaKnown RBP19.49■□□□□ 0.71
APTX-229ENST00000489583 NDUFAF2Q8N183 169 aa19.49■□□□□ 0.71
APTX-229ENST00000489583 FGF22Q9HCT0 170 aa19.49■□□□□ 0.71
APTX-229ENST00000489583 LIMA1Q9UHB6 759 aaKnown RBP19.49■□□□□ 0.71
APTX-229ENST00000489583 PRAMEF33A0A0G2JMD5 474 aa19.48■□□□□ 0.71
APTX-229ENST00000489583 A0A1W2PQC6 194 aa19.48■□□□□ 0.71
APTX-229ENST00000489583 SYCE3A1L190 88 aa19.48■□□□□ 0.71
APTX-229ENST00000489583 PRAMEF10O60809 474 aa19.48■□□□□ 0.71
APTX-229ENST00000489583 MYCLP1P12525 358 aaPredicted RBP19.48■□□□□ 0.71
APTX-229ENST00000489583 ERCC2P18074 760 aa19.48■□□□□ 0.71
APTX-229ENST00000489583 ITIH1P19827 911 aa19.48■□□□□ 0.71
APTX-229ENST00000489583 TRIM23P36406 574 aa19.48■□□□□ 0.71
APTX-229ENST00000489583 ARL4AP40617 200 aa19.48■□□□□ 0.71
APTX-229ENST00000489583 ATP1A2P50993 1020 aa19.48■□□□□ 0.71
APTX-229ENST00000489583 ZFP36L1Q07352 338 aaKnown RBP19.48■□□□□ 0.71
APTX-229ENST00000489583 MAMLD1Q13495 774 aa19.48■□□□□ 0.71
APTX-229ENST00000489583 HLTFQ14527 1009 aaKnown RBP eCLIP19.48■□□□□ 0.71
APTX-229ENST00000489583 LBRQ14739 615 aaKnown RBP19.48■□□□□ 0.71
APTX-229ENST00000489583 TGIF1Q15583 401 aa19.48■□□□□ 0.71
APTX-229ENST00000489583 PPP1R15BQ5SWA1 713 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms