RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 C3AR1Q16581 482 aa7.53□□□□□ -1.2
EXOSC3-206ENST00000489414 RESP18Q5W5W9 173 aa7.53□□□□□ -1.2
EXOSC3-206ENST00000489414 MMS22LQ6ZRQ5 1243 aa7.53□□□□□ -1.2
EXOSC3-206ENST00000489414 ATL2Q8NHH9 583 aa7.53□□□□□ -1.2
EXOSC3-206ENST00000489414 SHC3Q92529 594 aa7.53□□□□□ -1.2
EXOSC3-206ENST00000489414 CCDC127Q96BQ5 260 aa7.53□□□□□ -1.2
EXOSC3-206ENST00000489414 PLD4Q96BZ4 506 aa7.53□□□□□ -1.2
EXOSC3-206ENST00000489414 SMARCD1Q96GM5 515 aa7.53□□□□□ -1.2
EXOSC3-206ENST00000489414 NAP1L4Q99733 375 aaKnown RBP7.53□□□□□ -1.2
EXOSC3-206ENST00000489414 DPEP2Q9H4A9 486 aa7.53□□□□□ -1.2
EXOSC3-206ENST00000489414 AKIRIN1Q9H9L7 192 aaPredicted RBP7.53□□□□□ -1.2
EXOSC3-206ENST00000489414 LNPEPQ9UIQ6 1025 aa7.53□□□□□ -1.2
EXOSC3-206ENST00000489414 SIX4Q9UIU6 781 aa7.53□□□□□ -1.2
EXOSC3-206ENST00000489414 MORC2Q9Y6X9 1032 aaPredicted RBP7.53□□□□□ -1.2
EXOSC3-206ENST00000489414 CHD5Q8TDI0 1954 aa7.53□□□□□ -1.2
EXOSC3-206ENST00000489414 SMTNL1A8MU46 457 aa7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 TOR1BO14657 336 aa7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 KLHL41O60662 606 aa7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 SLC19A2O60779 497 aa7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 TBL1XO60907 577 aa7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 BEST1O76090 585 aa7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 PIGRP01833 764 aa7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 OR52Z1P0C646 297 aa7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 BRAFP15056 766 aa7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 RPS15P62841 145 aaKnown RBP7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 POU5F1Q01860 360 aaKnown RBP7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 NR5A1Q13285 461 aa7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 SGCGQ13326 291 aa7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 TRIP4Q15650 581 aaPredicted RBP7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 HIF1AQ16665 826 aa7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 SNAP47Q5SQN1 464 aa7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 ADGRF1Q5T601 910 aa7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 HEPHL1Q6MZM0 1159 aa7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 ERN2Q76MJ5 926 aaKnown RBP7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 DYMQ7RTS9 669 aa7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 GPRIN1Q7Z2K8 1008 aa7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 TAF8Q7Z7C8 310 aa7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 SCD5Q86SK9 330 aa7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 DRC7Q8IY82 874 aa7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 CPSF7Q8N684 471 aaKnown RBP7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 CSGALNACT2Q8N6G5 542 aa7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 B3GALNT2Q8NCR0 500 aa7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 ASB12Q8WXK4 309 aa7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 ZMYND19Q96E35 227 aaPredicted RBP7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 SGSM3Q96HU1 749 aa7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 CDK5RAP1Q96SZ6 601 aaKnown RBP7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 MRPL45Q9BRJ2 306 aaKnown RBP7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 HDAC8Q9BY41 377 aa7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 TRIM5Q9C035 493 aa7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 BEX4Q9NWD9 120 aaPredicted RBP7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 NAGPAQ9UK23 515 aa7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 ITGA11Q9UKX5 1188 aa7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 CEP83Q9Y592 693 aa7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 ATP8B3O60423 1300 aa7.52□□□□□ -1.21
EXOSC3-206ENST00000489414 IGLON5A6NGN9 336 aa7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 RNF103O00237 685 aa7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 KPNA3O00505 521 aaPredicted RBP7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 SLFN14P0C7P3 912 aa7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 FAM157CP0CG43 387 aa7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 BMP7P18075 431 aa7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 IL4RP24394 825 aa7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 RPA1P27694 616 aa7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 GNL1P36915 607 aaPredicted RBP7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 TXLNAP40222 546 aa7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 NNMTP40261 264 aa7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 WNT7BP56706 349 aa7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 SRP54P61011 504 aaKnown RBP7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 GPLD1P80108 840 aa7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 TFAMQ00059 246 aaKnown RBP7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 SRSF2Q01130 221 aaKnown RBP7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 DMTNQ08495 405 aa7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 NNTQ13423 1086 aa7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 ATP1A4Q13733 1029 aa7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 PCBP2Q15366 365 aaKnown RBP eCLIP7.51□□□□□ -1.214e-8■■■■■ 35.6
EXOSC3-206ENST00000489414 MIDNQ504T8 468 aa7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 FSCBQ5H9T9 825 aa7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 TTC38Q5R3I4 469 aa7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 PIK3R6Q5UE93 754 aa7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 KCTD16Q68DU8 428 aa7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 RPUSD3Q6P087 351 aaKnown RBP7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 SLC39A4Q6P5W5 647 aa7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 FAM199XQ6PEV8 388 aaPredicted RBP7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 LUZP1Q86V48 1076 aa7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 ELOA2Q8IYF1 753 aaPredicted RBP7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 GALNT16Q8N428 558 aa7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 ZBTB2Q8N680 514 aa7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 C3orf20Q8ND61 904 aa7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 GOT1L1Q8NHS2 421 aaPredicted RBP7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 KIAA1524Q8TCG1 905 aa7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 KCNN1Q92952 543 aa7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 SDCCAG3Q96C92 435 aa7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 TAAR6Q96RI8 345 aa7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 SMOQ99835 787 aa7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 IKZF4Q9H2S9 585 aa7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 CSNK1G1Q9HCP0 422 aa7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 KRT82Q9NSB4 513 aa7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 CLIC5Q9NZA1 410 aa7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 MARCH2Q9P0N8 246 aa7.51□□□□□ -1.21
EXOSC3-206ENST00000489414 ZKSCAN5Q9Y2L8 839 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms