RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 PAPOLAP51003 745 aaKnown RBP9.4□□□□□ -0.9
SNX17-207ENST00000489402 COPB1P53618 953 aaKnown RBP9.4□□□□□ -0.9
SNX17-207ENST00000489402 NFATC3Q12968 1075 aa9.4□□□□□ -0.9
SNX17-207ENST00000489402 BIRC2Q13490 618 aa9.4□□□□□ -0.9
SNX17-207ENST00000489402 RFTN1Q14699 578 aaPredicted RBP9.4□□□□□ -0.9
SNX17-207ENST00000489402 ACOX1Q15067 660 aa9.4□□□□□ -0.9
SNX17-207ENST00000489402 TGIF1Q15583 401 aa9.4□□□□□ -0.9
SNX17-207ENST00000489402 PHF19Q5T6S3 580 aa9.4□□□□□ -0.9
SNX17-207ENST00000489402 TMEM164Q5U3C3 297 aa9.4□□□□□ -0.9
SNX17-207ENST00000489402 SPECC1LQ69YQ0 1117 aa9.4□□□□□ -0.9
SNX17-207ENST00000489402 PPP1R2P3Q6NXS1 205 aa9.4□□□□□ -0.9
SNX17-207ENST00000489402 LIPIQ6XZB0 460 aa9.4□□□□□ -0.9
SNX17-207ENST00000489402 SPRED1Q7Z699 444 aa9.4□□□□□ -0.9
SNX17-207ENST00000489402 ZSWIM9Q86XI8 627 aa9.4□□□□□ -0.9
SNX17-207ENST00000489402 PLA2G15Q8NCC3 412 aa9.4□□□□□ -0.9
SNX17-207ENST00000489402 TSEN2Q8NCE0 465 aaKnown RBP9.4□□□□□ -0.9
SNX17-207ENST00000489402 AGPAT1Q99943 283 aa9.4□□□□□ -0.9
SNX17-207ENST00000489402 SLC39A8Q9C0K1 460 aa9.4□□□□□ -0.9
SNX17-207ENST00000489402 TMEM168Q9H0V1 697 aa9.4□□□□□ -0.9
SNX17-207ENST00000489402 DHX35Q9H5Z1 703 aaKnown RBP9.4□□□□□ -0.9
SNX17-207ENST00000489402 WDR26Q9H7D7 661 aa9.4□□□□□ -0.9
SNX17-207ENST00000489402 CYP4F12Q9HCS2 524 aa9.4□□□□□ -0.9
SNX17-207ENST00000489402 FGF22Q9HCT0 170 aa9.4□□□□□ -0.9
SNX17-207ENST00000489402 MRPL40Q9NQ50 206 aaKnown RBP9.4□□□□□ -0.9
SNX17-207ENST00000489402 KCTD5Q9NXV2 234 aa9.4□□□□□ -0.9
SNX17-207ENST00000489402 LRIT1Q9P2V4 623 aa9.4□□□□□ -0.9
SNX17-207ENST00000489402 RNF215Q9Y6U7 377 aa9.4□□□□□ -0.9
SNX17-207ENST00000489402 FLNBO75369 2602 aaKnown RBP9.4□□□□□ -0.9
SNX17-207ENST00000489402 PRAMEF33A0A0G2JMD5 474 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 PRSS38A1L453 326 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 LGALS16A8MUM7 142 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 DFFAO00273 331 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 TEX33O43247 280 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 PRAMEF10O60809 474 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 WISP1O95388 367 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 ITGB2P05107 769 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 SFTPCP11686 197 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 MYCLP1P12525 358 aaPredicted RBP9.39□□□□□ -0.91
SNX17-207ENST00000489402 PSMA2P25787 234 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 CD82P27701 267 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 RGRP47804 291 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 SCNN1BP51168 640 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 RENBPP51606 427 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 MAPK10P53779 464 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 AP1S1P61966 158 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 OGDHQ02218 1023 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 UBXN1Q04323 297 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 ZFP36L1Q07352 338 aaKnown RBP9.39□□□□□ -0.91
SNX17-207ENST00000489402 IL10RBQ08334 325 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 RALGDSQ12967 914 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 HLTFQ14527 1009 aaKnown RBP eCLIP9.39□□□□□ -0.91
SNX17-207ENST00000489402 ERMARDQ5T6L9 678 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 AFMIDQ63HM1 303 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 ACAD10Q6JQN1 1059 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 OGFOD3Q6PK18 319 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 RFX8Q6ZV50 586 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 DPPA4Q7L190 304 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 PIM3Q86V86 326 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 TP53INP2Q8IXH6 220 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 MCOLN2Q8IZK6 566 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 PELI3Q8N2H9 469 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 USP7Q93009 1102 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 ECHDC3Q96DC8 303 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 GSDMCQ9BYG8 508 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 PHPT1Q9NRX4 125 aaPredicted RBP9.39□□□□□ -0.91
SNX17-207ENST00000489402 FANCLQ9NW38 375 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 GPATCH2LQ9NWQ4 482 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 UNC13CQ8NB66 2214 aa9.39□□□□□ -0.91
SNX17-207ENST00000489402 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.38□□□□□ -0.91
SNX17-207ENST00000489402 A0A1W2PQ67 120 aa9.38□□□□□ -0.91
SNX17-207ENST00000489402 A0A1W2PQC6 194 aa9.38□□□□□ -0.91
SNX17-207ENST00000489402 TTC24A2A3L6 582 aaPredicted RBP9.38□□□□□ -0.91
SNX17-207ENST00000489402 RHPN2P1A8MT19 583 aa9.38□□□□□ -0.91
SNX17-207ENST00000489402 A8MX80 341 aa9.38□□□□□ -0.91
SNX17-207ENST00000489402 PRPSAP2O60256 369 aa9.38□□□□□ -0.91
SNX17-207ENST00000489402 RNF8O76064 485 aa9.38□□□□□ -0.91
SNX17-207ENST00000489402 CPNE6O95741 557 aa9.38□□□□□ -0.91
SNX17-207ENST00000489402 FERP16591 822 aa9.38□□□□□ -0.91
SNX17-207ENST00000489402 GM2AP17900 193 aa9.38□□□□□ -0.91
SNX17-207ENST00000489402 CDK11BP21127 795 aaKnown RBP9.38□□□□□ -0.91
SNX17-207ENST00000489402 ALDH4A1P30038 563 aa9.38□□□□□ -0.91
SNX17-207ENST00000489402 TRIM23P36406 574 aa9.38□□□□□ -0.91
SNX17-207ENST00000489402 ZNF135P52742 658 aaPredicted RBP9.38□□□□□ -0.91
SNX17-207ENST00000489402 NSUN2Q08J23 767 aaKnown RBP eCLIP9.38□□□□□ -0.91
SNX17-207ENST00000489402 ILF3Q12906 894 aaKnown RBP eCLIP9.38□□□□□ -0.91
SNX17-207ENST00000489402 PEX6Q13608 980 aa9.38□□□□□ -0.91
SNX17-207ENST00000489402 ZNF235Q14590 738 aa9.38□□□□□ -0.91
SNX17-207ENST00000489402 PTPRRQ15256 657 aa9.38□□□□□ -0.91
SNX17-207ENST00000489402 CA9Q16790 459 aa9.38□□□□□ -0.91
SNX17-207ENST00000489402 AMZ1Q400G9 498 aa9.38□□□□□ -0.91
SNX17-207ENST00000489402 PPP6R3Q5H9R7 873 aaPredicted RBP9.38□□□□□ -0.91
SNX17-207ENST00000489402 PPP1R15BQ5SWA1 713 aa9.38□□□□□ -0.91
SNX17-207ENST00000489402 TMCO4Q5TGY1 634 aa9.38□□□□□ -0.91
SNX17-207ENST00000489402 PNCKQ6P2M8 343 aa9.38□□□□□ -0.91
SNX17-207ENST00000489402 ARHGAP36Q6ZRI8 547 aa9.38□□□□□ -0.91
SNX17-207ENST00000489402 VASH2Q86V25 355 aa9.38□□□□□ -0.91
SNX17-207ENST00000489402 SLITRK4Q8IW52 837 aa9.38□□□□□ -0.91
SNX17-207ENST00000489402 CCL4L1Q8NHW4 92 aa9.38□□□□□ -0.91
SNX17-207ENST00000489402 EXTL1Q92935 676 aa9.38□□□□□ -0.91
SNX17-207ENST00000489402 NUS1Q96E22 293 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms