RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 YWHAEP62258 255 aaKnown RBP9.23□□□□□ -0.93
SSBP1-212ENST00000489378 CDK17Q00537 523 aa9.23□□□□□ -0.93
SSBP1-212ENST00000489378 STK38Q15208 465 aa9.23□□□□□ -0.93
SSBP1-212ENST00000489378 NFIL3Q16649 462 aa9.23□□□□□ -0.93
SSBP1-212ENST00000489378 SETD3Q86TU7 594 aaPredicted RBP9.23□□□□□ -0.93
SSBP1-212ENST00000489378 TTC7BQ86TV6 843 aa9.23□□□□□ -0.93
SSBP1-212ENST00000489378 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.23□□□□□ -0.93
SSBP1-212ENST00000489378 ARHGEF26Q96DR7 871 aa9.23□□□□□ -0.93
SSBP1-212ENST00000489378 C5orf34Q96MH7 638 aa9.23□□□□□ -0.93
SSBP1-212ENST00000489378 KLHL32Q96NJ5 620 aa9.23□□□□□ -0.93
SSBP1-212ENST00000489378 TEFMQ96QE5 360 aaKnown RBP9.23□□□□□ -0.93
SSBP1-212ENST00000489378 TRIM55Q9BYV6 548 aa9.23□□□□□ -0.93
SSBP1-212ENST00000489378 APMAPQ9HDC9 416 aa9.23□□□□□ -0.93
SSBP1-212ENST00000489378 ANLNQ9NQW6 1124 aa9.23□□□□□ -0.93
SSBP1-212ENST00000489378 MPP6Q9NZW5 540 aa9.23□□□□□ -0.93
SSBP1-212ENST00000489378 POLHQ9Y253 713 aa9.23□□□□□ -0.93
SSBP1-212ENST00000489378 TMEM184BQ9Y519 407 aaPredicted RBP9.23□□□□□ -0.93
SSBP1-212ENST00000489378 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.23□□□□□ -0.93
SSBP1-212ENST00000489378 PCDHB4Q9Y5E5 795 aa9.23□□□□□ -0.93
SSBP1-212ENST00000489378 RPS6KL1Q9Y6S9 549 aa9.23□□□□□ -0.93
SSBP1-212ENST00000489378 E5RJQ4 531 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 DLGAP3O95886 979 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 PCCBP05166 539 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 FGF1P05230 155 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 BMP6P22004 513 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 MC2RQ01718 297 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 SLC20A2Q08357 652 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 NME3Q13232 169 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 ADAM9Q13443 819 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 RABEP1Q15276 862 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 RETSATQ6NUM9 610 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 DENND1BQ6P3S1 775 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 MCEMP1Q8IX19 187 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 DEFB106AQ8N104 65 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 Q8NA96 180 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 ATL2Q8NHH9 583 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 PATE1Q8WXA2 126 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 KAT5Q92993 513 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 THAP9Q9H5L6 903 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 ATP13A1Q9HD20 1204 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 RCOR3Q9P2K3 495 aaPredicted RBP9.22□□□□□ -0.93
SSBP1-212ENST00000489378 MAPK8IP1Q9UQF2 711 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 SLC5A6Q9Y289 635 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 COQ4Q9Y3A0 265 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 DOCK4Q8N1I0 1966 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 IGHV1OR21-1A0A087WYE8 117 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 CDC14CA4D256 554 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 DRGXA6NNA5 263 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 A8MU76 341 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 KRT86O43790 486 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 ECEL1O95672 775 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 OR1E1P30953 314 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 DLSTP36957 453 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 ACADSBP45954 432 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 PGDP52209 483 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 DHX9Q08211 1270 aaKnown RBP9.22□□□□□ -0.93
SSBP1-212ENST00000489378 SQSTM1Q13501 440 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 STILQ15468 1287 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 RNFT1Q5M7Z0 435 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 ARTNQ5T4W7 220 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 ANKRD40Q6AI12 368 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 NRROSQ86YC3 692 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 PLA2G15Q8NCC3 412 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 OR56A4Q8NGH8 313 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 KIAA1524Q8TCG1 905 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 ZDHHC1Q8WTX9 485 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 C19orf60Q96EN9 201 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 SLC2A13Q96QE2 648 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 SLC29A3Q9BZD2 475 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 TRIT1Q9H3H1 467 aaKnown RBP9.22□□□□□ -0.93
SSBP1-212ENST00000489378 RRN3Q9NYV6 651 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 CROTQ9UKG9 612 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 ENTPD4Q9Y227 616 aa9.22□□□□□ -0.93
SSBP1-212ENST00000489378 TACC2O95359 2948 aa9.21□□□□□ -0.94
SSBP1-212ENST00000489378 ANKHD1Q8IWZ3 2542 aaKnown RBP9.21□□□□□ -0.94
SSBP1-212ENST00000489378 LOC100996750A0A140TA64 210 aa9.21□□□□□ -0.94
SSBP1-212ENST00000489378 ILVBLA1L0T0 632 aa9.21□□□□□ -0.94
SSBP1-212ENST00000489378 PPM1DO15297 605 aa9.21□□□□□ -0.94
SSBP1-212ENST00000489378 STX10O60499 249 aa9.21□□□□□ -0.94
SSBP1-212ENST00000489378 CUTAO60888 179 aa9.21□□□□□ -0.94
SSBP1-212ENST00000489378 PPP6R2O75170 966 aa9.21□□□□□ -0.94
SSBP1-212ENST00000489378 KATNA1O75449 491 aa9.21□□□□□ -0.94
SSBP1-212ENST00000489378 GRAP2O75791 330 aa9.21□□□□□ -0.94
SSBP1-212ENST00000489378 TBXAS1P24557 533 aaPredicted RBP9.21□□□□□ -0.94
SSBP1-212ENST00000489378 RPL13P26373 211 aaKnown RBP9.21□□□□□ -0.94
SSBP1-212ENST00000489378 GPR3P46089 330 aa9.21□□□□□ -0.94
SSBP1-212ENST00000489378 PTK2Q05397 1052 aa9.21□□□□□ -0.94
SSBP1-212ENST00000489378 MYLK3Q32MK0 819 aa9.21□□□□□ -0.94
SSBP1-212ENST00000489378 TMEM52BQ4KMG9 183 aa9.21□□□□□ -0.94
SSBP1-212ENST00000489378 SNAP47Q5SQN1 464 aa9.21□□□□□ -0.94
SSBP1-212ENST00000489378 ATXN7L2Q5T6C5 722 aaPredicted RBP9.21□□□□□ -0.94
SSBP1-212ENST00000489378 OTUD1Q5VV17 481 aaPredicted RBP9.21□□□□□ -0.94
SSBP1-212ENST00000489378 TMEM71Q6P5X7 295 aa9.21□□□□□ -0.94
SSBP1-212ENST00000489378 CEACAM20Q6UY09 585 aa9.21□□□□□ -0.94
SSBP1-212ENST00000489378 GDPD4Q6W3E5 623 aa9.21□□□□□ -0.94
SSBP1-212ENST00000489378 TMEM110Q86TL2 294 aa9.21□□□□□ -0.94
SSBP1-212ENST00000489378 XYLT1Q86Y38 959 aa9.21□□□□□ -0.94
SSBP1-212ENST00000489378 APLFQ8IW19 511 aaPredicted RBP9.21□□□□□ -0.94
SSBP1-212ENST00000489378 ESX1Q8N693 406 aa9.21□□□□□ -0.94
SSBP1-212ENST00000489378 OR2AP1Q8NGE2 309 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms