RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 RASA4BC9J798 803 aa11.55□□□□□ -0.56
HDAC6-233ENST00000489352 O00370 1275 aa11.55□□□□□ -0.56
HDAC6-233ENST00000489352 RASA4O43374 803 aa11.55□□□□□ -0.56
HDAC6-233ENST00000489352 GABBR2O75899 941 aa11.55□□□□□ -0.56
HDAC6-233ENST00000489352 RHOBTB3O94955 611 aa11.55□□□□□ -0.56
HDAC6-233ENST00000489352 F9P00740 461 aa11.55□□□□□ -0.56
HDAC6-233ENST00000489352 TRIM49P0CI25 452 aa11.55□□□□□ -0.56
HDAC6-233ENST00000489352 TRIM49CP0CI26 452 aa11.55□□□□□ -0.56
HDAC6-233ENST00000489352 KIAA1024LP59773 190 aa11.55□□□□□ -0.56
HDAC6-233ENST00000489352 CDK17Q00537 523 aa11.55□□□□□ -0.56
HDAC6-233ENST00000489352 RAD51Q06609 339 aa11.55□□□□□ -0.56
HDAC6-233ENST00000489352 HGSNATQ68CP4 663 aa11.55□□□□□ -0.56
HDAC6-233ENST00000489352 BNC2Q6ZN30 1099 aaPredicted RBP11.55□□□□□ -0.56
HDAC6-233ENST00000489352 SYVN1Q86TM6 617 aa11.55□□□□□ -0.56
HDAC6-233ENST00000489352 PLPP6Q8IY26 295 aa11.55□□□□□ -0.56
HDAC6-233ENST00000489352 ELMO2Q96JJ3 720 aa11.55□□□□□ -0.56
HDAC6-233ENST00000489352 ATP13A1Q9HD20 1204 aa11.55□□□□□ -0.56
HDAC6-233ENST00000489352 DMAC2Q9NW81 257 aa11.55□□□□□ -0.56
HDAC6-233ENST00000489352 DDIT4Q9NX09 232 aa11.55□□□□□ -0.56
HDAC6-233ENST00000489352 C5AR2Q9P296 337 aa11.55□□□□□ -0.56
HDAC6-233ENST00000489352 SUCOQ9UBS9 1254 aaKnown RBP11.55□□□□□ -0.56
HDAC6-233ENST00000489352 ACANP16112 2415 aa11.55□□□□□ -0.56
HDAC6-233ENST00000489352 CEACAM4O75871 244 aa11.54□□□□□ -0.56
HDAC6-233ENST00000489352 NR3C1P04150 777 aa11.54□□□□□ -0.56
HDAC6-233ENST00000489352 ITIH2P19823 946 aa11.54□□□□□ -0.56
HDAC6-233ENST00000489352 FECHP22830 423 aa11.54□□□□□ -0.56
HDAC6-233ENST00000489352 PTPN4P29074 926 aa11.54□□□□□ -0.56
HDAC6-233ENST00000489352 HNRNPH3P31942 346 aaKnown RBP11.54□□□□□ -0.56
HDAC6-233ENST00000489352 GGCXP38435 758 aa11.54□□□□□ -0.56
HDAC6-233ENST00000489352 MAPK9P45984 424 aa11.54□□□□□ -0.56
HDAC6-233ENST00000489352 KRTAP10-9P60411 292 aa11.54□□□□□ -0.56
HDAC6-233ENST00000489352 YWHAZP63104 245 aaKnown RBP11.54□□□□□ -0.56
HDAC6-233ENST00000489352 PTK2Q05397 1052 aa11.54□□□□□ -0.56
HDAC6-233ENST00000489352 PPP3CAQ08209 521 aa11.54□□□□□ -0.56
HDAC6-233ENST00000489352 IL11RAQ14626 422 aa11.54□□□□□ -0.56
HDAC6-233ENST00000489352 KYNUQ16719 465 aa11.54□□□□□ -0.56
HDAC6-233ENST00000489352 ZNF630Q2M218 657 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-233ENST00000489352 C1orf220Q5T0J3 134 aa11.54□□□□□ -0.56
HDAC6-233ENST00000489352 KRT39Q6A163 491 aa11.54□□□□□ -0.56
HDAC6-233ENST00000489352 LRRC31Q6UY01 552 aa11.54□□□□□ -0.56
HDAC6-233ENST00000489352 UNC13DQ70J99 1090 aa11.54□□□□□ -0.56
HDAC6-233ENST00000489352 INTS8Q75QN2 995 aaKnown RBP11.54□□□□□ -0.56
HDAC6-233ENST00000489352 BEND5Q7L4P6 421 aa11.54□□□□□ -0.56
HDAC6-233ENST00000489352 BRAPQ7Z569 592 aa11.54□□□□□ -0.56
HDAC6-233ENST00000489352 ZNF761Q86XN6 746 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-233ENST00000489352 ZNF295-AS1Q8N0V1 137 aa11.54□□□□□ -0.56
HDAC6-233ENST00000489352 NAGSQ8N159 534 aa11.54□□□□□ -0.56
HDAC6-233ENST00000489352 GUF1Q8N442 669 aaKnown RBP11.54□□□□□ -0.56
HDAC6-233ENST00000489352 OR7D4Q8NG98 312 aa11.54□□□□□ -0.56
HDAC6-233ENST00000489352 SPATA3Q8NHX4 192 aa11.54□□□□□ -0.56
HDAC6-233ENST00000489352 FUBP1Q96AE4 644 aaKnown RBP11.54□□□□□ -0.56
HDAC6-233ENST00000489352 ISG20Q96AZ6 181 aaKnown RBP11.54□□□□□ -0.56
HDAC6-233ENST00000489352 EEF2KMTQ96G04 330 aa11.54□□□□□ -0.56
HDAC6-233ENST00000489352 OR6C1Q96RD1 312 aa11.54□□□□□ -0.56
HDAC6-233ENST00000489352 TMEM8AQ9HCN3 771 aa11.54□□□□□ -0.56
HDAC6-233ENST00000489352 LHX9Q9NQ69 397 aa11.54□□□□□ -0.56
HDAC6-233ENST00000489352 ARHGEF38Q9NXL2 777 aa11.54□□□□□ -0.56
HDAC6-233ENST00000489352 FBXO2Q9UK22 296 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-233ENST00000489352 HS3ST4Q9Y661 456 aa11.54□□□□□ -0.56
HDAC6-233ENST00000489352 MN1Q10571 1320 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-233ENST00000489352 DOCK4Q8N1I0 1966 aa11.54□□□□□ -0.56
HDAC6-233ENST00000489352 TEX33O43247 280 aa11.53□□□□□ -0.56
HDAC6-233ENST00000489352 TMEM63AO94886 807 aa11.53□□□□□ -0.56
HDAC6-233ENST00000489352 MAP3K6O95382 1288 aa11.53□□□□□ -0.56
HDAC6-233ENST00000489352 ALPPP05187 535 aa11.53□□□□□ -0.56
HDAC6-233ENST00000489352 PLEKP08567 350 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-233ENST00000489352 AK4P27144 223 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-233ENST00000489352 PTGIRP43119 386 aa11.53□□□□□ -0.56
HDAC6-233ENST00000489352 NDST2P52849 883 aa11.53□□□□□ -0.56
HDAC6-233ENST00000489352 RRADP55042 308 aa11.53□□□□□ -0.56
HDAC6-233ENST00000489352 RPS18P62269 152 aaKnown RBP11.53□□□□□ -0.56
HDAC6-233ENST00000489352 PDE1BQ01064 536 aa11.53□□□□□ -0.56
HDAC6-233ENST00000489352 ADAM9Q13443 819 aa11.53□□□□□ -0.56
HDAC6-233ENST00000489352 RAPSNQ13702 412 aa11.53□□□□□ -0.56
HDAC6-233ENST00000489352 MYLK3Q32MK0 819 aa11.53□□□□□ -0.56
HDAC6-233ENST00000489352 TMEM52BQ4KMG9 183 aa11.53□□□□□ -0.56
HDAC6-233ENST00000489352 ALFQ53S48 1182 aa11.53□□□□□ -0.56
HDAC6-233ENST00000489352 MIIPQ5JXC2 388 aa11.53□□□□□ -0.56
HDAC6-233ENST00000489352 ERAP2Q6P179 960 aa11.53□□□□□ -0.56
HDAC6-233ENST00000489352 ZNF517Q6ZMY9 492 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-233ENST00000489352 TFAP2DQ7Z6R9 452 aa11.53□□□□□ -0.56
HDAC6-233ENST00000489352 KCNMB4Q86W47 210 aa11.53□□□□□ -0.56
HDAC6-233ENST00000489352 NRROSQ86YC3 692 aa11.53□□□□□ -0.56
HDAC6-233ENST00000489352 CHDHQ8NE62 594 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-233ENST00000489352 FBXL13Q8NEE6 735 aa11.53□□□□□ -0.56
HDAC6-233ENST00000489352 OR2AP1Q8NGE2 309 aa11.53□□□□□ -0.56
HDAC6-233ENST00000489352 MED15Q96RN5 788 aa11.53□□□□□ -0.56
HDAC6-233ENST00000489352 SMAD5Q99717 465 aaKnown RBP11.53□□□□□ -0.56
HDAC6-233ENST00000489352 STN1Q9H668 368 aaKnown RBP11.53□□□□□ -0.56
HDAC6-233ENST00000489352 KBTBD4Q9NVX7 518 aa11.53□□□□□ -0.56
HDAC6-233ENST00000489352 RAB20Q9NX57 234 aa11.53□□□□□ -0.56
HDAC6-233ENST00000489352 NEU2Q9Y3R4 380 aa11.53□□□□□ -0.56
HDAC6-233ENST00000489352 PIKFYVEQ9Y2I7 2098 aa11.53□□□□□ -0.56
HDAC6-233ENST00000489352 TRBV23OR9-2A0A075B6M9 112 aa11.52□□□□□ -0.57
HDAC6-233ENST00000489352 FAM221AA4D161 298 aa11.52□□□□□ -0.57
HDAC6-233ENST00000489352 KCNN4O15554 427 aa11.52□□□□□ -0.57
HDAC6-233ENST00000489352 THAP12O43422 761 aa11.52□□□□□ -0.57
HDAC6-233ENST00000489352 PAGE1O75459 146 aa11.52□□□□□ -0.57
HDAC6-233ENST00000489352 IGLV3-25P01717 112 aa11.52□□□□□ -0.57
HDAC6-233ENST00000489352 ACADSBP45954 432 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms