RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 CREBRFQ8IUR6 639 aa16.24■□□□□ 0.19
USP48-210ENST00000489108 NRSN1Q8IZ57 195 aa16.24■□□□□ 0.19
USP48-210ENST00000489108 UNC5BQ8IZJ1 945 aa16.24■□□□□ 0.19
USP48-210ENST00000489108 EMC1Q8N766 993 aa16.24■□□□□ 0.19
USP48-210ENST00000489108 CASKIN2Q8WXE0 1202 aa16.24■□□□□ 0.19
USP48-210ENST00000489108 SUDS3Q9H7L9 328 aaPredicted RBP16.24■□□□□ 0.19
USP48-210ENST00000489108 LHX3Q9UBR4 397 aa16.24■□□□□ 0.19
USP48-210ENST00000489108 DNAJC12Q9UKB3 198 aa16.24■□□□□ 0.19
USP48-210ENST00000489108 NEU3Q9UQ49 428 aa16.24■□□□□ 0.19
USP48-210ENST00000489108 ENO4A6NNW6 628 aa16.23■□□□□ 0.19
USP48-210ENST00000489108 PPM1DO15297 605 aa16.23■□□□□ 0.19
USP48-210ENST00000489108 ZW10O43264 779 aa16.23■□□□□ 0.19
USP48-210ENST00000489108 BUB1BO60566 1050 aaPredicted RBP16.23■□□□□ 0.19
USP48-210ENST00000489108 PLEKP08567 350 aaPredicted RBP16.23■□□□□ 0.19
USP48-210ENST00000489108 KRT7P08729 469 aa16.23■□□□□ 0.19
USP48-210ENST00000489108 HOXC4P09017 264 aaPredicted RBP16.23■□□□□ 0.19
USP48-210ENST00000489108 CCNB1P14635 433 aa16.23■□□□□ 0.19
USP48-210ENST00000489108 NR1D1P20393 614 aa16.23■□□□□ 0.19
USP48-210ENST00000489108 TRIM23P36406 574 aa16.23■□□□□ 0.19
USP48-210ENST00000489108 MMP12P39900 470 aa16.23■□□□□ 0.19
USP48-210ENST00000489108 STAT1P42224 750 aa16.23■□□□□ 0.19
USP48-210ENST00000489108 GPR3P46089 330 aa16.23■□□□□ 0.19
USP48-210ENST00000489108 CDO1Q16878 200 aa16.23■□□□□ 0.19
USP48-210ENST00000489108 EXOC3L4Q17RC7 722 aa16.23■□□□□ 0.19
USP48-210ENST00000489108 ANKS6Q68DC2 871 aa16.23■□□□□ 0.19
USP48-210ENST00000489108 PHLDB2Q86SQ0 1253 aa16.23■□□□□ 0.19
USP48-210ENST00000489108 FAM129CQ86XR2 697 aa16.23■□□□□ 0.19
USP48-210ENST00000489108 PELI3Q8N2H9 469 aa16.23■□□□□ 0.19
USP48-210ENST00000489108 OR4D9Q8NGE8 314 aa16.23■□□□□ 0.19
USP48-210ENST00000489108 PATE1Q8WXA2 126 aa16.23■□□□□ 0.19
USP48-210ENST00000489108 TBC1D31Q96DN5 1066 aa16.23■□□□□ 0.19
USP48-210ENST00000489108 SPRY4Q9C004 299 aa16.23■□□□□ 0.19
USP48-210ENST00000489108 SIX2Q9NPC8 291 aa16.23■□□□□ 0.19
USP48-210ENST00000489108 KCNK4Q9NYG8 393 aa16.23■□□□□ 0.19
USP48-210ENST00000489108 TMEM9Q9P0T7 183 aa16.23■□□□□ 0.19
USP48-210ENST00000489108 TAAR2Q9P1P5 351 aa16.23■□□□□ 0.19
USP48-210ENST00000489108 HOOK1Q9UJC3 728 aaKnown RBP16.23■□□□□ 0.19
USP48-210ENST00000489108 TP53TG5Q9Y2B4 290 aa16.23■□□□□ 0.19
USP48-210ENST00000489108 ATP8A1Q9Y2Q0 1164 aa16.23■□□□□ 0.19
USP48-210ENST00000489108 PRSS38A1L453 326 aa16.22■□□□□ 0.19
USP48-210ENST00000489108 EFCAB7A8K855 629 aa16.22■□□□□ 0.19
USP48-210ENST00000489108 K7EM74 188 aa16.22■□□□□ 0.19
USP48-210ENST00000489108 TEX33O43247 280 aa16.22■□□□□ 0.19
USP48-210ENST00000489108 FUCA1P04066 466 aa16.22■□□□□ 0.19
USP48-210ENST00000489108 THRAP10827 490 aa16.22■□□□□ 0.19
USP48-210ENST00000489108 AK4P27144 223 aaPredicted RBP16.22■□□□□ 0.19
USP48-210ENST00000489108 MAP4P27816 1152 aaKnown RBP16.22■□□□□ 0.19
USP48-210ENST00000489108 BIRC2Q13490 618 aa16.22■□□□□ 0.19
USP48-210ENST00000489108 C15orf59Q2T9L4 293 aaPredicted RBP16.22■□□□□ 0.19
USP48-210ENST00000489108 CFAP58Q5T655 872 aa16.22■□□□□ 0.19
USP48-210ENST00000489108 ATP1A1-AS1Q5TC04 95 aa16.22■□□□□ 0.19
USP48-210ENST00000489108 TIPARPQ7Z3E1 657 aaKnown RBP16.22■□□□□ 0.19
USP48-210ENST00000489108 CAMK1DQ8IU85 385 aa16.22■□□□□ 0.19
USP48-210ENST00000489108 FAM71AQ8IYT1 594 aa16.22■□□□□ 0.19
USP48-210ENST00000489108 NLGN4XQ8N0W4 816 aa16.22■□□□□ 0.19
USP48-210ENST00000489108 NLGN4YQ8NFZ3 816 aaPredicted RBP16.22■□□□□ 0.19
USP48-210ENST00000489108 KIAA1143Q96AT1 154 aaPredicted RBP16.22■□□□□ 0.19
USP48-210ENST00000489108 TIGD1Q96MW7 591 aa16.22■□□□□ 0.19
USP48-210ENST00000489108 CARS2Q9HA77 564 aaKnown RBP16.22■□□□□ 0.19
USP48-210ENST00000489108 ATP6V1DQ9Y5K8 247 aa16.22■□□□□ 0.19
USP48-210ENST00000489108 TEP1Q99973 2627 aaKnown RBP16.22■□□□□ 0.19
USP48-210ENST00000489108 IGHV1OR21-1A0A087WYE8 117 aa16.21■□□□□ 0.19
USP48-210ENST00000489108 CFAP69A5D8W1 941 aa16.21■□□□□ 0.19
USP48-210ENST00000489108 B4E171 279 aa16.21■□□□□ 0.19
USP48-210ENST00000489108 AGFG2O95081 481 aa16.21■□□□□ 0.19
USP48-210ENST00000489108 GM2AP17900 193 aa16.21■□□□□ 0.19
USP48-210ENST00000489108 CSF2RBP32927 897 aa16.21■□□□□ 0.19
USP48-210ENST00000489108 TSPAN7P41732 249 aa16.21■□□□□ 0.19
USP48-210ENST00000489108 UQCRFS1P47985 274 aa16.21■□□□□ 0.19
USP48-210ENST00000489108 BPIFB4P59827 614 aa16.21■□□□□ 0.19
USP48-210ENST00000489108 RALGDSQ12967 914 aa16.21■□□□□ 0.19
USP48-210ENST00000489108 PAK1Q13153 545 aa16.21■□□□□ 0.19
USP48-210ENST00000489108 SQSTM1Q13501 440 aa16.21■□□□□ 0.19
USP48-210ENST00000489108 SEPT6Q14141 434 aa16.21■□□□□ 0.19
USP48-210ENST00000489108 TSR1Q2NL82 804 aaKnown RBP16.21■□□□□ 0.19
USP48-210ENST00000489108 CCDC14Q49A88 953 aa16.21■□□□□ 0.19
USP48-210ENST00000489108 TAF3Q5VWG9 929 aa16.21■□□□□ 0.19
USP48-210ENST00000489108 PNCKQ6P2M8 343 aa16.21■□□□□ 0.19
USP48-210ENST00000489108 C16orf46Q6P387 395 aa16.21■□□□□ 0.19
USP48-210ENST00000489108 BRAT1Q6PJG6 821 aa16.21■□□□□ 0.19
USP48-210ENST00000489108 LIPIQ6XZB0 460 aa16.21■□□□□ 0.19
USP48-210ENST00000489108 ARCQ7LC44 396 aa16.21■□□□□ 0.19
USP48-210ENST00000489108 DNAAF5Q86Y56 855 aa16.21■□□□□ 0.19
USP48-210ENST00000489108 BMPERQ8N8U9 685 aa16.21■□□□□ 0.19
USP48-210ENST00000489108 TEX19Q8NA77 164 aa16.21■□□□□ 0.19
USP48-210ENST00000489108 CPA5Q8WXQ8 436 aa16.21■□□□□ 0.19
USP48-210ENST00000489108 RTP4Q96DX8 246 aa16.21■□□□□ 0.19
USP48-210ENST00000489108 ZNF641Q96N77 438 aaPredicted RBP16.21■□□□□ 0.19
USP48-210ENST00000489108 CTRCQ99895 268 aa16.21■□□□□ 0.19
USP48-210ENST00000489108 GSDMCQ9BYG8 508 aa16.21■□□□□ 0.19
USP48-210ENST00000489108 WDR26Q9H7D7 661 aa16.21■□□□□ 0.19
USP48-210ENST00000489108 METTL5Q9NRN9 209 aaKnown RBP16.21■□□□□ 0.19
USP48-210ENST00000489108 ITPR2Q14571 2701 aa16.2■□□□□ 0.18
USP48-210ENST00000489108 GOLGA6L4A6NEF3 574 aa16.2■□□□□ 0.18
USP48-210ENST00000489108 A8MX80 341 aa16.2■□□□□ 0.18
USP48-210ENST00000489108 RASA4BC9J798 803 aa16.2■□□□□ 0.18
USP48-210ENST00000489108 BIN1O00499 593 aa16.2■□□□□ 0.18
USP48-210ENST00000489108 RASA4O43374 803 aa16.2■□□□□ 0.18
USP48-210ENST00000489108 CYP11B1P15538 503 aa16.2■□□□□ 0.18
USP48-210ENST00000489108 TCN2P20062 427 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms