RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 INPP5AQ14642 412 aa14.32□□□□□ -0.12
BRCA1-218ENST00000489037 CCDC157Q569K6 752 aa14.32□□□□□ -0.12
BRCA1-218ENST00000489037 FAXCQ5TGI0 409 aa14.32□□□□□ -0.12
BRCA1-218ENST00000489037 MACC1Q6ZN28 852 aa14.32□□□□□ -0.12
BRCA1-218ENST00000489037 PEX26Q7Z412 305 aa14.32□□□□□ -0.12
BRCA1-218ENST00000489037 NT5DC3Q86UY8 548 aa14.32□□□□□ -0.12
BRCA1-218ENST00000489037 UBL4BQ8N7F7 174 aa14.32□□□□□ -0.12
BRCA1-218ENST00000489037 CCDC112Q8NEF3 446 aa14.32□□□□□ -0.12
BRCA1-218ENST00000489037 PIH1D2Q8WWB5 315 aa14.32□□□□□ -0.12
BRCA1-218ENST00000489037 ADAMTS14Q8WXS8 1223 aa14.32□□□□□ -0.12
BRCA1-218ENST00000489037 KRT35Q92764 455 aa14.32□□□□□ -0.12
BRCA1-218ENST00000489037 NUS1Q96E22 293 aa14.32□□□□□ -0.12
BRCA1-218ENST00000489037 AGAP3Q96P47 875 aa14.32□□□□□ -0.12
BRCA1-218ENST00000489037 OLFM3Q96PB7 478 aa14.32□□□□□ -0.12
BRCA1-218ENST00000489037 DESI2Q9BSY9 194 aa14.32□□□□□ -0.12
BRCA1-218ENST00000489037 APOOQ9BUR5 198 aa14.32□□□□□ -0.12
BRCA1-218ENST00000489037 DUSP23Q9BVJ7 150 aa14.32□□□□□ -0.12
BRCA1-218ENST00000489037 TDRD1Q9BXT4 1180 aaKnown RBP14.32□□□□□ -0.12
BRCA1-218ENST00000489037 ADGRE3Q9BY15 652 aa14.32□□□□□ -0.12
BRCA1-218ENST00000489037 SLC13A1Q9BZW2 595 aa14.32□□□□□ -0.12
BRCA1-218ENST00000489037 TSGA10Q9BZW7 698 aa14.32□□□□□ -0.12
BRCA1-218ENST00000489037 PCDH9Q9HC56 1237 aa14.32□□□□□ -0.12
BRCA1-218ENST00000489037 SPASTQ9UBP0 616 aa14.32□□□□□ -0.12
BRCA1-218ENST00000489037 RPL26L1Q9UNX3 145 aaKnown RBP14.32□□□□□ -0.12
BRCA1-218ENST00000489037 CHKBQ9Y259 395 aa14.32□□□□□ -0.12
BRCA1-218ENST00000489037 PPIL1Q9Y3C6 166 aa14.32□□□□□ -0.12
BRCA1-218ENST00000489037 HACD1B0YJ81 288 aa14.31□□□□□ -0.12
BRCA1-218ENST00000489037 PDE2AO00408 941 aaPredicted RBP14.31□□□□□ -0.12
BRCA1-218ENST00000489037 FFAR2O15552 330 aa14.31□□□□□ -0.12
BRCA1-218ENST00000489037 FZD6O60353 706 aa14.31□□□□□ -0.12
BRCA1-218ENST00000489037 HEXIM1O94992 359 aaKnown RBP14.31□□□□□ -0.12
BRCA1-218ENST00000489037 PDHA1P08559 390 aa14.31□□□□□ -0.12
BRCA1-218ENST00000489037 CDK4P11802 303 aa14.31□□□□□ -0.12
BRCA1-218ENST00000489037 CD86P42081 329 aa14.31□□□□□ -0.12
BRCA1-218ENST00000489037 TNNT3P45378 269 aaPredicted RBP14.31□□□□□ -0.12
BRCA1-218ENST00000489037 MARCKSL1P49006 195 aa14.31□□□□□ -0.12
BRCA1-218ENST00000489037 DAB2P98082 770 aa14.31□□□□□ -0.12
BRCA1-218ENST00000489037 NIPAL4Q0D2K0 466 aa14.31□□□□□ -0.12
BRCA1-218ENST00000489037 ZBTB17Q13105 803 aa14.31□□□□□ -0.12
BRCA1-218ENST00000489037 ZNF211Q13398 564 aaPredicted RBP14.31□□□□□ -0.12
BRCA1-218ENST00000489037 CNGA3Q16281 694 aa14.31□□□□□ -0.12
BRCA1-218ENST00000489037 TEX44Q53QW1 395 aa14.31□□□□□ -0.12
BRCA1-218ENST00000489037 CCDC70Q6NSX1 233 aa14.31□□□□□ -0.12
BRCA1-218ENST00000489037 ENPP7Q6UWV6 458 aa14.31□□□□□ -0.12
BRCA1-218ENST00000489037 KANSL1Q7Z3B3 1105 aa14.31□□□□□ -0.12
BRCA1-218ENST00000489037 CHCHD4Q8N4Q1 142 aa14.31□□□□□ -0.12
BRCA1-218ENST00000489037 PNPLA1Q8N8W4 532 aa14.31□□□□□ -0.12
BRCA1-218ENST00000489037 LPCAT1Q8NF37 534 aa14.31□□□□□ -0.12
BRCA1-218ENST00000489037 ARRDC2Q8TBH0 407 aa14.31□□□□□ -0.12
BRCA1-218ENST00000489037 MCCC1Q96RQ3 725 aaPredicted RBP14.31□□□□□ -0.12
BRCA1-218ENST00000489037 HEMGNQ9BXL5 484 aa14.31□□□□□ -0.12
BRCA1-218ENST00000489037 SAE1Q9UBE0 346 aaPredicted RBP14.31□□□□□ -0.12
BRCA1-218ENST00000489037 EFR3BQ9Y2G0 817 aa14.31□□□□□ -0.12
BRCA1-218ENST00000489037 CSNK1G3Q9Y6M4 447 aa14.31□□□□□ -0.12
BRCA1-218ENST00000489037 A0A0J9YYE9 177 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 GRID2IPA4D2P6 1211 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 GOLGA6CA6NDK9 693 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 GOLGA6BA6NDN3 693 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 NPIPB15A6NHN6 443 aaPredicted RBP14.3□□□□□ -0.12
BRCA1-218ENST00000489037 MIF4GDA9UHW6 222 aaKnown RBP14.3□□□□□ -0.12
BRCA1-218ENST00000489037 H7C0C1 242 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 APOC4-APOC2K7ER74 178 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 SCAMP1O15126 338 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 ARHGAP6O43182 974 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 AQP9O43315 295 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 KRT86O43790 486 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 HYAL3O43820 417 aaPredicted RBP14.3□□□□□ -0.12
BRCA1-218ENST00000489037 TJP3O95049 919 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 RASGRP1O95267 797 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 TRBC1P01850 177 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 APOC2P02655 101 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 C1SP09871 688 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 ALPIP09923 528 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 GOLGA6DP0CG33 693 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 CTSEP14091 401 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 ZNF30P17039 623 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 CKMT2P17540 419 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 HNF1BP35680 557 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 ATP5OP48047 213 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 EIF2B5Q13144 721 aaKnown RBP14.3□□□□□ -0.12
BRCA1-218ENST00000489037 NFATC4Q14934 902 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 BBS12Q6ZW61 710 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 RAB44Q7Z6P3 723 aaPredicted RBP14.3□□□□□ -0.12
BRCA1-218ENST00000489037 SLCO6A1Q86UG4 719 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 ZC3H18Q86VM9 953 aaKnown RBP14.3□□□□□ -0.12
BRCA1-218ENST00000489037 PHACTR4Q8IZ21 702 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 SLC25A45Q8N413 288 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 RNF10Q8N5U6 811 aaKnown RBP14.3□□□□□ -0.12
BRCA1-218ENST00000489037 CNTD1Q8N815 330 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 OR4C6Q8NH72 309 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 LMX1AQ8TE12 382 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 GLMNQ92990 594 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 HAUS1Q96CS2 278 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 COQ10AQ96MF6 247 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 WDR92Q96MX6 357 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 VAT1Q99536 393 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 SCNM1Q9BWG6 230 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 CEP41Q9BYV8 373 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 OSBPL8Q9BZF1 889 aa14.3□□□□□ -0.12
BRCA1-218ENST00000489037 SLC25A51Q9H1U9 297 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms