RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 CERCAMQ5T4B2 595 aa18.49■□□□□ 0.55
HDAC6-231ENST00000488905 KIAA1614Q5VZ46 1190 aa18.49■□□□□ 0.55
HDAC6-231ENST00000488905 TAF8Q7Z7C8 310 aa18.49■□□□□ 0.55
HDAC6-231ENST00000488905 TMEM74Q96NL1 305 aa18.49■□□□□ 0.55
HDAC6-231ENST00000488905 WDR26Q9H7D7 661 aa18.49■□□□□ 0.55
HDAC6-231ENST00000488905 MRPL40Q9NQ50 206 aaKnown RBP18.49■□□□□ 0.55
HDAC6-231ENST00000488905 APPL1Q9UKG1 709 aa18.49■□□□□ 0.55
HDAC6-231ENST00000488905 ATXN7L1Q9ULK2 861 aaPredicted RBP18.49■□□□□ 0.55
HDAC6-231ENST00000488905 MYO18BQ8IUG5 2567 aa18.49■□□□□ 0.55
HDAC6-231ENST00000488905 PRPSAP2O60256 369 aa18.48■□□□□ 0.55
HDAC6-231ENST00000488905 NOBOXO60393 691 aa18.48■□□□□ 0.55
HDAC6-231ENST00000488905 RNF8O76064 485 aa18.48■□□□□ 0.55
HDAC6-231ENST00000488905 HOXC4P09017 264 aaPredicted RBP18.48■□□□□ 0.55
HDAC6-231ENST00000488905 HGFP14210 728 aa18.48■□□□□ 0.55
HDAC6-231ENST00000488905 GLB1P16278 677 aa18.48■□□□□ 0.55
HDAC6-231ENST00000488905 MIPP30301 263 aa18.48■□□□□ 0.55
HDAC6-231ENST00000488905 SLC5A2P31639 672 aa18.48■□□□□ 0.55
HDAC6-231ENST00000488905 TRIM23P36406 574 aa18.48■□□□□ 0.55
HDAC6-231ENST00000488905 POLR2LP62875 67 aaKnown RBP18.48■□□□□ 0.55
HDAC6-231ENST00000488905 TMCO4Q5TGY1 634 aa18.48■□□□□ 0.55
HDAC6-231ENST00000488905 SPRED1Q7Z699 444 aa18.48■□□□□ 0.55
HDAC6-231ENST00000488905 JAMLQ86YT9 394 aa18.48■□□□□ 0.55
HDAC6-231ENST00000488905 PSTKQ8IV42 348 aaKnown RBP18.48■□□□□ 0.55
HDAC6-231ENST00000488905 AOPEPQ8N6M6 819 aa18.48■□□□□ 0.55
HDAC6-231ENST00000488905 FAM46DQ8NEK8 389 aa18.48■□□□□ 0.55
HDAC6-231ENST00000488905 FNIP1Q8TF40 1166 aa18.48■□□□□ 0.55
HDAC6-231ENST00000488905 PSKH2Q96QS6 385 aa18.48■□□□□ 0.55
HDAC6-231ENST00000488905 CCNL2Q96S94 520 aaPredicted RBP18.48■□□□□ 0.55
HDAC6-231ENST00000488905 TRIM7Q9C029 511 aa18.48■□□□□ 0.55
HDAC6-231ENST00000488905 TMEM168Q9H0V1 697 aa18.48■□□□□ 0.55
HDAC6-231ENST00000488905 SEPT3Q9UH03 358 aa18.48■□□□□ 0.55
HDAC6-231ENST00000488905 ACSL6Q9UKU0 697 aa18.48■□□□□ 0.55
HDAC6-231ENST00000488905 SPTA1P02549 2419 aa18.47■□□□□ 0.55
HDAC6-231ENST00000488905 TMEM191CA6NGB0 347 aa18.47■□□□□ 0.55
HDAC6-231ENST00000488905 LRRC53A6NM62 1247 aa18.47■□□□□ 0.55
HDAC6-231ENST00000488905 B4DGG1 531 aa18.47■□□□□ 0.55
HDAC6-231ENST00000488905 TNFRSF10CO14798 259 aa18.47■□□□□ 0.55
HDAC6-231ENST00000488905 LRCH4O75427 683 aa18.47■□□□□ 0.55
HDAC6-231ENST00000488905 JMJD7P0C870 316 aa18.47■□□□□ 0.55
HDAC6-231ENST00000488905 PNLIPP16233 465 aa18.47■□□□□ 0.55
HDAC6-231ENST00000488905 SCNN1BP51168 640 aa18.47■□□□□ 0.55
HDAC6-231ENST00000488905 RENBPP51606 427 aa18.47■□□□□ 0.55
HDAC6-231ENST00000488905 ZNF135P52742 658 aaPredicted RBP18.47■□□□□ 0.55
HDAC6-231ENST00000488905 DPYSQ14117 519 aa18.47■□□□□ 0.55
HDAC6-231ENST00000488905 HLTFQ14527 1009 aaKnown RBP eCLIP18.47■□□□□ 0.55
HDAC6-231ENST00000488905 C14orf28Q4W4Y0 310 aa18.47■□□□□ 0.55
HDAC6-231ENST00000488905 OGFOD3Q6PK18 319 aa18.47■□□□□ 0.55
HDAC6-231ENST00000488905 SFTPA2Q8IWL1 248 aa18.47■□□□□ 0.55
HDAC6-231ENST00000488905 PELI3Q8N2H9 469 aa18.47■□□□□ 0.55
HDAC6-231ENST00000488905 Q8N9G6 341 aaPredicted RBP18.47■□□□□ 0.55
HDAC6-231ENST00000488905 SPOCK2Q92563 424 aa18.47■□□□□ 0.55
HDAC6-231ENST00000488905 NSMCE3Q96MG7 304 aa18.47■□□□□ 0.55
HDAC6-231ENST00000488905 LGR4Q9BXB1 951 aa18.47■□□□□ 0.55
HDAC6-231ENST00000488905 B4GALT6Q9UBX8 382 aa18.47■□□□□ 0.55
HDAC6-231ENST00000488905 PISDQ9UG56 409 aa18.47■□□□□ 0.55
HDAC6-231ENST00000488905 LOXL2Q9Y4K0 774 aa18.47■□□□□ 0.55
HDAC6-231ENST00000488905 RNF215Q9Y6U7 377 aa18.47■□□□□ 0.55
HDAC6-231ENST00000488905 TLN1Q9Y490 2541 aaKnown RBP18.46■□□□□ 0.55
HDAC6-231ENST00000488905 PRSS38A1L453 326 aa18.46■□□□□ 0.55
HDAC6-231ENST00000488905 J3QKU1 62 aa18.46■□□□□ 0.55
HDAC6-231ENST00000488905 TEX33O43247 280 aa18.46■□□□□ 0.55
HDAC6-231ENST00000488905 ZNF235Q14590 738 aa18.46■□□□□ 0.55
HDAC6-231ENST00000488905 LBRQ14739 615 aaKnown RBP18.46■□□□□ 0.55
HDAC6-231ENST00000488905 ACOX1Q15067 660 aa18.46■□□□□ 0.55
HDAC6-231ENST00000488905 ASIC2Q16515 512 aa18.46■□□□□ 0.55
HDAC6-231ENST00000488905 SPECC1LQ69YQ0 1117 aa18.46■□□□□ 0.55
HDAC6-231ENST00000488905 PNCKQ6P2M8 343 aa18.46■□□□□ 0.55
HDAC6-231ENST00000488905 TP53INP2Q8IXH6 220 aa18.46■□□□□ 0.55
HDAC6-231ENST00000488905 LZTR1Q8N653 840 aa18.46■□□□□ 0.55
HDAC6-231ENST00000488905 CCL4L1Q8NHW4 92 aa18.46■□□□□ 0.55
HDAC6-231ENST00000488905 NUS1Q96E22 293 aa18.46■□□□□ 0.55
HDAC6-231ENST00000488905 ZNF599Q96NL3 588 aa18.46■□□□□ 0.55
HDAC6-231ENST00000488905 GBP4Q96PP9 640 aa18.46■□□□□ 0.55
HDAC6-231ENST00000488905 ZWILCHQ9H900 591 aa18.46■□□□□ 0.55
HDAC6-231ENST00000488905 CYP4F12Q9HCS2 524 aa18.46■□□□□ 0.55
HDAC6-231ENST00000488905 WDR70Q9NW82 654 aa18.46■□□□□ 0.55
HDAC6-231ENST00000488905 CWC15Q9P013 229 aaKnown RBP18.46■□□□□ 0.55
HDAC6-231ENST00000488905 CNOT8Q9UFF9 292 aaKnown RBP18.46■□□□□ 0.55
HDAC6-231ENST00000488905 SCINQ9Y6U3 715 aa18.46■□□□□ 0.55
HDAC6-231ENST00000488905 SDK2Q58EX2 2172 aa18.46■□□□□ 0.55
HDAC6-231ENST00000488905 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.45■□□□□ 0.54
HDAC6-231ENST00000488905 A8MX80 341 aa18.45■□□□□ 0.54
HDAC6-231ENST00000488905 NUDT21O43809 227 aaKnown RBP18.45■□□□□ 0.54
HDAC6-231ENST00000488905 SOCS5O75159 536 aa18.45■□□□□ 0.54
HDAC6-231ENST00000488905 MYCLP1P12525 358 aaPredicted RBP18.45■□□□□ 0.54
HDAC6-231ENST00000488905 HCAR3P49019 387 aa18.45■□□□□ 0.54
HDAC6-231ENST00000488905 ZFP36L1Q07352 338 aaKnown RBP18.45■□□□□ 0.54
HDAC6-231ENST00000488905 SLC10A7Q0GE19 358 aa18.45■□□□□ 0.54
HDAC6-231ENST00000488905 CNGA3Q16281 694 aa18.45■□□□□ 0.54
HDAC6-231ENST00000488905 TSR1Q2NL82 804 aaKnown RBP18.45■□□□□ 0.54
HDAC6-231ENST00000488905 E4F1Q66K89 784 aaPredicted RBP18.45■□□□□ 0.54
HDAC6-231ENST00000488905 KIAA1524Q8TCG1 905 aa18.45■□□□□ 0.54
HDAC6-231ENST00000488905 ZNF653Q96CK0 615 aa18.45■□□□□ 0.54
HDAC6-231ENST00000488905 MED8Q96G25 268 aa18.45■□□□□ 0.54
HDAC6-231ENST00000488905 COQ10AQ96MF6 247 aa18.45■□□□□ 0.54
HDAC6-231ENST00000488905 DPEP2Q9H4A9 486 aa18.45■□□□□ 0.54
HDAC6-231ENST00000488905 HAUS4Q9H6D7 363 aa18.45■□□□□ 0.54
HDAC6-231ENST00000488905 LRIT1Q9P2V4 623 aa18.45■□□□□ 0.54
HDAC6-231ENST00000488905 MOSPD1Q9UJG1 213 aa18.45■□□□□ 0.54
HDAC6-231ENST00000488905 A0A1W2PQ67 120 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms