RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 CCHCR1Q8TD31 782 aa12.93□□□□□ -0.34
PHF1-210ENST00000488767 BTN2A2Q8WVV5 523 aa12.93□□□□□ -0.34
PHF1-210ENST00000488767 ALG3Q92685 438 aa12.93□□□□□ -0.34
PHF1-210ENST00000488767 NUS1Q96E22 293 aa12.93□□□□□ -0.34
PHF1-210ENST00000488767 IMP4Q96G21 291 aaKnown RBP12.93□□□□□ -0.34
PHF1-210ENST00000488767 HES6Q96HZ4 224 aa12.93□□□□□ -0.34
PHF1-210ENST00000488767 PPP1R2P1Q96PQ5 205 aa12.93□□□□□ -0.34
PHF1-210ENST00000488767 MCCC1Q96RQ3 725 aaPredicted RBP12.93□□□□□ -0.34
PHF1-210ENST00000488767 SRPK1Q96SB4 655 aaKnown RBP12.93□□□□□ -0.34
PHF1-210ENST00000488767 RBM15Q96T37 977 aaKnown RBP eCLIP12.93□□□□□ -0.34
PHF1-210ENST00000488767 KLF6Q99612 283 aaPredicted RBP12.93□□□□□ -0.34
PHF1-210ENST00000488767 CEP41Q9BYV8 373 aa12.93□□□□□ -0.34
PHF1-210ENST00000488767 GLOD4Q9HC38 313 aa12.93□□□□□ -0.34
PHF1-210ENST00000488767 PACSIN2Q9UNF0 486 aaPredicted RBP12.93□□□□□ -0.34
PHF1-210ENST00000488767 CHKBQ9Y259 395 aa12.93□□□□□ -0.34
PHF1-210ENST00000488767 SHROOM3Q8TF72 1996 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 ADAMTS9Q9P2N4 1935 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 A0A0J9YYE9 177 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 SPTY2D1-AS1A0A0U1RR47 76 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 GOLGA6CA6NDK9 693 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 GOLGA6BA6NDN3 693 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 CAPN8A6NHC0 703 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 ZSCAN12O43309 604 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 FZD6O60353 706 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 HEXIM1O94992 359 aaKnown RBP12.92□□□□□ -0.34
PHF1-210ENST00000488767 TRBC1P01850 177 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 GOLGA6DP0CG33 693 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 CTPS1P17812 591 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 MSNP26038 577 aaKnown RBP12.92□□□□□ -0.34
PHF1-210ENST00000488767 PTPN3P26045 913 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 IGFALSP35858 605 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 BLKP51451 505 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 PFN3P60673 137 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 SIM1P81133 766 aaPredicted RBP12.92□□□□□ -0.34
PHF1-210ENST00000488767 SKOR1P84550 965 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 SEMG2Q02383 582 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 NIPAL4Q0D2K0 466 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 ZNF211Q13398 564 aaPredicted RBP12.92□□□□□ -0.34
PHF1-210ENST00000488767 RPS6KA1Q15418 735 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 TRIP6Q15654 476 aaKnown RBP12.92□□□□□ -0.34
PHF1-210ENST00000488767 SLC14A2Q15849 920 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 PCSK7Q16549 785 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 WSCD2Q2TBF2 565 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 PRAMEF14Q5SWL7 426 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 PID1Q7Z2X4 250 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 CNTD1Q8N815 330 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 TP53I13Q8NBR0 393 aaPredicted RBP12.92□□□□□ -0.34
PHF1-210ENST00000488767 ACTL9Q8TC94 416 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 PIH1D2Q8WWB5 315 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 BMFQ96LC9 184 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 TEKT5Q96M29 485 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 MLPHQ9BV36 600 aaPredicted RBP12.92□□□□□ -0.34
PHF1-210ENST00000488767 SLC13A1Q9BZW2 595 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 EVA1BQ9NVM1 165 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 GOLGA6AQ9NYA3 693 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 FTSJ1Q9UET6 329 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 RSPH14Q9UHP6 348 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 PCOLCE2Q9UKZ9 415 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 APOBEC2Q9Y235 224 aaKnown RBP12.92□□□□□ -0.34
PHF1-210ENST00000488767 PPP2R2CQ9Y2T4 447 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 PPIL1Q9Y3C6 166 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 CACNA1AO00555 2505 aa12.92□□□□□ -0.34
PHF1-210ENST00000488767 TRPM6Q9BX84 2022 aa12.91□□□□□ -0.34
PHF1-210ENST00000488767 A0A0U1RQJ8 604 aa12.91□□□□□ -0.34
PHF1-210ENST00000488767 NPIPB15A6NHN6 443 aaPredicted RBP12.91□□□□□ -0.34
PHF1-210ENST00000488767 DDX3YO15523 660 aaKnown RBP12.91□□□□□ -0.34
PHF1-210ENST00000488767 ANXA9O76027 345 aa12.91□□□□□ -0.34
PHF1-210ENST00000488767 PYGLP06737 847 aa12.91□□□□□ -0.34
PHF1-210ENST00000488767 PDHA1P08559 390 aa12.91□□□□□ -0.34
PHF1-210ENST00000488767 ALPIP09923 528 aa12.91□□□□□ -0.34
PHF1-210ENST00000488767 RBP3P10745 1247 aa12.91□□□□□ -0.34
PHF1-210ENST00000488767 HNF1BP35680 557 aa12.91□□□□□ -0.34
PHF1-210ENST00000488767 CDK18Q07002 472 aa12.91□□□□□ -0.34
PHF1-210ENST00000488767 ADCY2Q08462 1091 aa12.91□□□□□ -0.34
PHF1-210ENST00000488767 RALGDSQ12967 914 aa12.91□□□□□ -0.34
PHF1-210ENST00000488767 PRPSAP1Q14558 356 aa12.91□□□□□ -0.34
PHF1-210ENST00000488767 INPP5AQ14642 412 aa12.91□□□□□ -0.34
PHF1-210ENST00000488767 CNGA3Q16281 694 aa12.91□□□□□ -0.34
PHF1-210ENST00000488767 MACC1Q6ZN28 852 aa12.91□□□□□ -0.34
PHF1-210ENST00000488767 B4GALNT4Q76KP1 1039 aa12.91□□□□□ -0.34
PHF1-210ENST00000488767 GATAD2AQ86YP4 633 aa12.91□□□□□ -0.34
PHF1-210ENST00000488767 RAVER1Q8IY67 606 aaKnown RBP12.91□□□□□ -0.34
PHF1-210ENST00000488767 SLC22A18ASQ8N1D0 253 aa12.91□□□□□ -0.34
PHF1-210ENST00000488767 SAP25Q8TEE9 199 aa12.91□□□□□ -0.34
PHF1-210ENST00000488767 NSMCE3Q96MG7 304 aa12.91□□□□□ -0.34
PHF1-210ENST00000488767 FSD1LQ9BXM9 530 aa12.91□□□□□ -0.34
PHF1-210ENST00000488767 WDR26Q9H7D7 661 aa12.91□□□□□ -0.34
PHF1-210ENST00000488767 MBNL1Q9NR56 388 aaKnown RBP12.91□□□□□ -0.34
PHF1-210ENST00000488767 FAM153AQ9UHL3 310 aa12.91□□□□□ -0.34
PHF1-210ENST00000488767 DNAH14Q0VDD8 3507 aa12.9□□□□□ -0.34
PHF1-210ENST00000488767 C1orf232A0A0U1RR37 186 aa12.9□□□□□ -0.34
PHF1-210ENST00000488767 ANKRD66B4E2M5 251 aa12.9□□□□□ -0.34
PHF1-210ENST00000488767 KCNN4O15554 427 aa12.9□□□□□ -0.34
PHF1-210ENST00000488767 PMPCBO75439 489 aa12.9□□□□□ -0.34
PHF1-210ENST00000488767 TRIM16O95361 564 aa12.9□□□□□ -0.34
PHF1-210ENST00000488767 CSF2P04141 144 aa12.9□□□□□ -0.34
PHF1-210ENST00000488767 NME1P15531 152 aaKnown RBP12.9□□□□□ -0.34
PHF1-210ENST00000488767 TSHRP16473 764 aa12.9□□□□□ -0.34
PHF1-210ENST00000488767 NFKB1P19838 968 aa12.9□□□□□ -0.34
PHF1-210ENST00000488767 LHCGRP22888 699 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms