RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 SPATA16Q9BXB7 569 aa12.72□□□□□ -0.37
CLIC4-202ENST00000488683 A0A087X1B8 175 aa12.71□□□□□ -0.37
CLIC4-202ENST00000488683 SLCO1B7G3V0H7 640 aa12.71□□□□□ -0.37
CLIC4-202ENST00000488683 PLOD2O00469 737 aa12.71□□□□□ -0.37
CLIC4-202ENST00000488683 ACOT8O14734 319 aa12.71□□□□□ -0.37
CLIC4-202ENST00000488683 IPO13O94829 963 aaKnown RBP12.71□□□□□ -0.37
CLIC4-202ENST00000488683 SMIM18P0DKX4 95 aa12.71□□□□□ -0.37
CLIC4-202ENST00000488683 PAMP19021 973 aa12.71□□□□□ -0.37
CLIC4-202ENST00000488683 KCNQ1P51787 676 aa12.71□□□□□ -0.37
CLIC4-202ENST00000488683 PRAMEP78395 509 aa12.71□□□□□ -0.37
CLIC4-202ENST00000488683 MYBPC1Q00872 1141 aa12.71□□□□□ -0.37
CLIC4-202ENST00000488683 CRHR2Q13324 411 aa12.71□□□□□ -0.37
CLIC4-202ENST00000488683 PFKFB4Q16877 469 aa12.71□□□□□ -0.37
CLIC4-202ENST00000488683 MTX3Q5HYI7 312 aa12.71□□□□□ -0.37
CLIC4-202ENST00000488683 MARC1Q5VT66 337 aa12.71□□□□□ -0.37
CLIC4-202ENST00000488683 CILP2Q8IUL8 1156 aa12.71□□□□□ -0.37
CLIC4-202ENST00000488683 IMP4Q96G21 291 aaKnown RBP12.71□□□□□ -0.37
CLIC4-202ENST00000488683 TRAPPC9Q96Q05 1148 aa12.71□□□□□ -0.37
CLIC4-202ENST00000488683 HBEGFQ99075 208 aa12.71□□□□□ -0.37
CLIC4-202ENST00000488683 CIB1Q99828 191 aa12.71□□□□□ -0.37
CLIC4-202ENST00000488683 SEMA3CQ99985 751 aa12.71□□□□□ -0.37
CLIC4-202ENST00000488683 SLC25A51Q9H1U9 297 aa12.71□□□□□ -0.37
CLIC4-202ENST00000488683 CCSER2Q9H7U1 834 aa12.71□□□□□ -0.37
CLIC4-202ENST00000488683 EFCAB1Q9HAE3 211 aa12.71□□□□□ -0.37
CLIC4-202ENST00000488683 ATP13A1Q9HD20 1204 aa12.71□□□□□ -0.37
CLIC4-202ENST00000488683 SNX13Q9Y5W8 968 aa12.71□□□□□ -0.37
CLIC4-202ENST00000488683 V9GYQ6 96 aa12.71□□□□□ -0.37
CLIC4-202ENST00000488683 UBA6A0AVT1 1052 aaPredicted RBP12.71□□□□□ -0.38
CLIC4-202ENST00000488683 ZNF839A8K0R7 811 aa12.71□□□□□ -0.38
CLIC4-202ENST00000488683 UBDO15205 165 aa12.71□□□□□ -0.38
CLIC4-202ENST00000488683 AHCYL1O43865 530 aa12.71□□□□□ -0.38
CLIC4-202ENST00000488683 TADA2AO75478 443 aa12.71□□□□□ -0.38
CLIC4-202ENST00000488683 MT-ND1P03886 318 aa12.71□□□□□ -0.38
CLIC4-202ENST00000488683 CKMT2P17540 419 aa12.71□□□□□ -0.38
CLIC4-202ENST00000488683 TBX4P57082 545 aa12.71□□□□□ -0.38
CLIC4-202ENST00000488683 SH3BP2P78314 561 aa12.71□□□□□ -0.38
CLIC4-202ENST00000488683 PFKPQ01813 784 aa12.71□□□□□ -0.38
CLIC4-202ENST00000488683 ADGRE1Q14246 886 aa12.71□□□□□ -0.38
CLIC4-202ENST00000488683 OR4D1Q15615 310 aa12.71□□□□□ -0.38
CLIC4-202ENST00000488683 PIWIL4Q7Z3Z4 852 aaKnown RBP12.71□□□□□ -0.38
CLIC4-202ENST00000488683 THEM5Q8N1Q8 247 aa12.71□□□□□ -0.38
CLIC4-202ENST00000488683 MYO1HQ8N1T3 1032 aa12.71□□□□□ -0.38
CLIC4-202ENST00000488683 LPGAT1Q92604 370 aa12.71□□□□□ -0.38
CLIC4-202ENST00000488683 RPRD1AQ96P16 312 aaPredicted RBP12.71□□□□□ -0.38
CLIC4-202ENST00000488683 SERPINI1Q99574 410 aa12.71□□□□□ -0.38
CLIC4-202ENST00000488683 SLC29A1Q99808 456 aa12.71□□□□□ -0.38
CLIC4-202ENST00000488683 ZBED2Q9BTP6 218 aa12.71□□□□□ -0.38
CLIC4-202ENST00000488683 GSTO2Q9H4Y5 243 aa12.71□□□□□ -0.38
CLIC4-202ENST00000488683 RGS18Q9NS28 235 aa12.71□□□□□ -0.38
CLIC4-202ENST00000488683 TBC1D13Q9NVG8 400 aa12.71□□□□□ -0.38
CLIC4-202ENST00000488683 USP22Q9UPT9 525 aa12.71□□□□□ -0.38
CLIC4-202ENST00000488683 TIMM22Q9Y584 194 aa12.71□□□□□ -0.38
CLIC4-202ENST00000488683 C7orf72A4D263 438 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 SLC22A2O15244 555 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 GPC4O75487 556 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 TIPRLO75663 272 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 GOT2P00505 430 aaKnown RBP12.7□□□□□ -0.38
CLIC4-202ENST00000488683 LTA4HP09960 611 aaKnown RBP12.7□□□□□ -0.38
CLIC4-202ENST00000488683 LINC00032P0C843 101 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 CYBAP13498 195 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 DNAJB1P25685 340 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 PRDX3P30048 256 aaKnown RBP12.7□□□□□ -0.38
CLIC4-202ENST00000488683 LEPRP48357 1165 aaKnown RBP12.7□□□□□ -0.38
CLIC4-202ENST00000488683 POLD2P49005 469 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 CHN2P52757 468 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 INHBEP58166 350 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 DNAJB13P59910 316 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 TIAL1Q01085 375 aaKnown RBP eCLIP12.7□□□□□ -0.38
CLIC4-202ENST00000488683 HERC3Q15034 1050 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 VPS26BQ4G0F5 336 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 HABP4Q5JVS0 413 aaKnown RBP12.7□□□□□ -0.38
CLIC4-202ENST00000488683 CWF19L1Q69YN2 538 aaKnown RBP12.7□□□□□ -0.38
CLIC4-202ENST00000488683 RETREG3Q86VR2 466 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 ST13P4Q8IZP2 240 aaPredicted RBP12.7□□□□□ -0.38
CLIC4-202ENST00000488683 CEP70Q8NHQ1 597 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 BHMTQ93088 406 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 SLC39A13Q96H72 371 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 SEPT5Q99719 369 aaPredicted RBP12.7□□□□□ -0.38
CLIC4-202ENST00000488683 VCX3BQ9H321 246 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 PRDM5Q9NQX1 630 aaPredicted RBP12.7□□□□□ -0.38
CLIC4-202ENST00000488683 CACNA2D2Q9NY47 1150 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 VPS28Q9UK41 221 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 LZTS1Q9Y250 596 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 VWA7Q9Y334 891 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 TRAF6Q9Y4K3 522 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 VWA8A3KMH1 1905 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 GREB1Q4ZG55 1949 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 HEATR9A2RTY3 570 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 PSMD12O00232 456 aaPredicted RBP12.7□□□□□ -0.38
CLIC4-202ENST00000488683 NR5A2O00482 541 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 ENPP3O14638 875 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 S1PR4O95977 384 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 PSMC3P17980 439 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 RGRP47804 291 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 IRX1P78414 480 aaPredicted RBP12.7□□□□□ -0.38
CLIC4-202ENST00000488683 PLIN5Q00G26 463 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 MAPRE1Q15691 268 aaKnown RBP12.7□□□□□ -0.38
CLIC4-202ENST00000488683 AAK1Q2M2I8 961 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 KIF19Q2TAC6 998 aa12.7□□□□□ -0.38
CLIC4-202ENST00000488683 CLLU1OSQ5K130 101 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms