RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 LRP4O75096 1905 aa19.13■□□□□ 0.65
GGPS1-206ENST00000488594 J3KR12 359 aa19.12■□□□□ 0.65
GGPS1-206ENST00000488594 PPFIA2O75334 1257 aa19.12■□□□□ 0.65
GGPS1-206ENST00000488594 TPM2P07951 284 aa19.12■□□□□ 0.65
GGPS1-206ENST00000488594 TPI1P60174 286 aa19.12■□□□□ 0.65
GGPS1-206ENST00000488594 SYCP1Q15431 976 aa19.12■□□□□ 0.65
GGPS1-206ENST00000488594 AFMIDQ63HM1 303 aa19.12■□□□□ 0.65
GGPS1-206ENST00000488594 DNAJC24Q6P3W2 148 aa19.12■□□□□ 0.65
GGPS1-206ENST00000488594 LIPIQ6XZB0 460 aa19.12■□□□□ 0.65
GGPS1-206ENST00000488594 SRLQ86TD4 932 aa19.12■□□□□ 0.65
GGPS1-206ENST00000488594 CYP4F12Q9HCS2 524 aa19.12■□□□□ 0.65
GGPS1-206ENST00000488594 NLRC4Q9NPP4 1024 aa19.12■□□□□ 0.65
GGPS1-206ENST00000488594 NAV2Q8IVL1 2488 aa19.11■□□□□ 0.65
GGPS1-206ENST00000488594 ARHGAP42A6NI28 874 aa19.11■□□□□ 0.65
GGPS1-206ENST00000488594 EIF3CLB5ME19 914 aaKnown RBP19.11■□□□□ 0.65
GGPS1-206ENST00000488594 STMND1H3BQB6 276 aa19.11■□□□□ 0.65
GGPS1-206ENST00000488594 HGSO14964 777 aaPredicted RBP19.11■□□□□ 0.65
GGPS1-206ENST00000488594 PALMO75781 387 aa19.11■□□□□ 0.65
GGPS1-206ENST00000488594 PRKCGP05129 697 aa19.11■□□□□ 0.65
GGPS1-206ENST00000488594 B4GALNT1Q00973 533 aa19.11■□□□□ 0.65
GGPS1-206ENST00000488594 BCL2L1Q07817 233 aa19.11■□□□□ 0.65
GGPS1-206ENST00000488594 NSUN2Q08J23 767 aaKnown RBP eCLIP19.11■□□□□ 0.65
GGPS1-206ENST00000488594 FKBP15Q5T1M5 1219 aa19.11■□□□□ 0.65
GGPS1-206ENST00000488594 DPPA4Q7L190 304 aa19.11■□□□□ 0.65
GGPS1-206ENST00000488594 MON1BQ7L1V2 547 aa19.11■□□□□ 0.65
GGPS1-206ENST00000488594 TMPRSS9Q7Z410 1059 aa19.11■□□□□ 0.65
GGPS1-206ENST00000488594 PAF1Q8N7H5 531 aa19.11■□□□□ 0.65
GGPS1-206ENST00000488594 TSEN2Q8NCE0 465 aaKnown RBP19.11■□□□□ 0.65
GGPS1-206ENST00000488594 MCEEQ96PE7 176 aa19.11■□□□□ 0.65
GGPS1-206ENST00000488594 EIF3CQ99613 913 aaKnown RBP19.11■□□□□ 0.65
GGPS1-206ENST00000488594 SEMA6CQ9H3T2 930 aa19.11■□□□□ 0.65
GGPS1-206ENST00000488594 GEMIN8Q9NWZ8 242 aaKnown RBP19.11■□□□□ 0.65
GGPS1-206ENST00000488594 SCN8AQ9UQD0 1980 aa19.1■□□□□ 0.65
GGPS1-206ENST00000488594 TCRBV5S1A1TA0A578 114 aa19.1■□□□□ 0.65
GGPS1-206ENST00000488594 PRSS38A1L453 326 aa19.1■□□□□ 0.65
GGPS1-206ENST00000488594 RFTN1Q14699 578 aaPredicted RBP19.1■□□□□ 0.65
GGPS1-206ENST00000488594 NR1D2Q14995 579 aa19.1■□□□□ 0.65
GGPS1-206ENST00000488594 C16orf72Q14CZ0 275 aa19.1■□□□□ 0.65
GGPS1-206ENST00000488594 PNCKQ6P2M8 343 aa19.1■□□□□ 0.65
GGPS1-206ENST00000488594 ZNF438Q7Z4V0 828 aa19.1■□□□□ 0.65
GGPS1-206ENST00000488594 C17orf82Q86X59 251 aaPredicted RBP19.1■□□□□ 0.65
GGPS1-206ENST00000488594 SFTPA2Q8IWL1 248 aa19.1■□□□□ 0.65
GGPS1-206ENST00000488594 CINPQ9BW66 212 aaPredicted RBP19.1■□□□□ 0.65
GGPS1-206ENST00000488594 LGR4Q9BXB1 951 aa19.1■□□□□ 0.65
GGPS1-206ENST00000488594 GSDMCQ9BYG8 508 aa19.1■□□□□ 0.65
GGPS1-206ENST00000488594 SLC25A18Q9H1K4 315 aa19.1■□□□□ 0.65
GGPS1-206ENST00000488594 RDH14Q9HBH5 336 aa19.1■□□□□ 0.65
GGPS1-206ENST00000488594 KCTD5Q9NXV2 234 aa19.1■□□□□ 0.65
GGPS1-206ENST00000488594 MOSPD1Q9UJG1 213 aa19.1■□□□□ 0.65
GGPS1-206ENST00000488594 UNC13CQ8NB66 2214 aa19.1■□□□□ 0.65
GGPS1-206ENST00000488594 RHPN2P1A8MT19 583 aa19.09■□□□□ 0.65
GGPS1-206ENST00000488594 AGRPO00253 132 aa19.09■□□□□ 0.65
GGPS1-206ENST00000488594 B4GAT1O43505 415 aa19.09■□□□□ 0.65
GGPS1-206ENST00000488594 MYCLP1P12525 358 aaPredicted RBP19.09■□□□□ 0.65
GGPS1-206ENST00000488594 CCNB1P14635 433 aa19.09■□□□□ 0.65
GGPS1-206ENST00000488594 RGRP47804 291 aa19.09■□□□□ 0.65
GGPS1-206ENST00000488594 KLK7P49862 253 aa19.09■□□□□ 0.65
GGPS1-206ENST00000488594 ATP1A2P50993 1020 aa19.09■□□□□ 0.65
GGPS1-206ENST00000488594 PAPOLAP51003 745 aaKnown RBP19.09■□□□□ 0.65
GGPS1-206ENST00000488594 NFKB2Q00653 900 aa19.09■□□□□ 0.65
GGPS1-206ENST00000488594 ILF3Q12906 894 aaKnown RBP eCLIP19.09■□□□□ 0.65
GGPS1-206ENST00000488594 PEX6Q13608 980 aa19.09■□□□□ 0.65
GGPS1-206ENST00000488594 CCL4L1Q8NHW4 92 aa19.09■□□□□ 0.65
GGPS1-206ENST00000488594 GPBAR1Q8TDU6 330 aa19.09■□□□□ 0.65
GGPS1-206ENST00000488594 CELF6Q96J87 481 aaKnown RBP19.09■□□□□ 0.65
GGPS1-206ENST00000488594 SLC39A8Q9C0K1 460 aa19.09■□□□□ 0.65
GGPS1-206ENST00000488594 VPS16Q9H269 839 aa19.09■□□□□ 0.65
GGPS1-206ENST00000488594 ADNPQ9H2P0 1102 aa19.09■□□□□ 0.65
GGPS1-206ENST00000488594 PCDHGA3Q9Y5H0 932 aa19.09■□□□□ 0.65
GGPS1-206ENST00000488594 LRRK1Q38SD2 2015 aa19.09■□□□□ 0.65
GGPS1-206ENST00000488594 EPHB6O15197 1021 aa19.08■□□□□ 0.65
GGPS1-206ENST00000488594 WT1P19544 449 aaPredicted RBP19.08■□□□□ 0.65
GGPS1-206ENST00000488594 ALDH4A1P30038 563 aa19.08■□□□□ 0.65
GGPS1-206ENST00000488594 GPR3P46089 330 aa19.08■□□□□ 0.65
GGPS1-206ENST00000488594 AP1S1P61966 158 aa19.08■□□□□ 0.65
GGPS1-206ENST00000488594 RPL7AP62424 266 aaKnown RBP19.08■□□□□ 0.65
GGPS1-206ENST00000488594 TRA2AQ13595 282 aaKnown RBP eCLIP19.08■□□□□ 0.65
GGPS1-206ENST00000488594 ACOX1Q15067 660 aa19.08■□□□□ 0.65
GGPS1-206ENST00000488594 AMZ1Q400G9 498 aa19.08■□□□□ 0.65
GGPS1-206ENST00000488594 PPP1R15BQ5SWA1 713 aa19.08■□□□□ 0.65
GGPS1-206ENST00000488594 DCUN1D2Q6PH85 259 aa19.08■□□□□ 0.65
GGPS1-206ENST00000488594 ZNF574Q6ZN55 896 aaPredicted RBP19.08■□□□□ 0.65
GGPS1-206ENST00000488594 CCDC112Q8NEF3 446 aa19.08■□□□□ 0.65
GGPS1-206ENST00000488594 ZDHHC1Q8WTX9 485 aa19.08■□□□□ 0.65
GGPS1-206ENST00000488594 HTR3CQ8WXA8 447 aa19.08■□□□□ 0.65
GGPS1-206ENST00000488594 SPOCK2Q92563 424 aa19.08■□□□□ 0.65
GGPS1-206ENST00000488594 TAAR9Q96RI9 348 aa19.08■□□□□ 0.65
GGPS1-206ENST00000488594 FUCA2Q9BTY2 467 aa19.08■□□□□ 0.65
GGPS1-206ENST00000488594 CARS2Q9HA77 564 aaKnown RBP19.08■□□□□ 0.65
GGPS1-206ENST00000488594 SP110Q9HB58 689 aa19.08■□□□□ 0.65
GGPS1-206ENST00000488594 PHPT1Q9NRX4 125 aaPredicted RBP19.08■□□□□ 0.65
GGPS1-206ENST00000488594 SPATS2LQ9NUQ6 558 aaKnown RBP19.08■□□□□ 0.65
GGPS1-206ENST00000488594 SEPT11Q9NVA2 429 aaKnown RBP19.08■□□□□ 0.65
GGPS1-206ENST00000488594 TRNAU1APQ9NX07 287 aaKnown RBP19.08■□□□□ 0.65
GGPS1-206ENST00000488594 TLN1Q9Y490 2541 aaKnown RBP19.08■□□□□ 0.64
GGPS1-206ENST00000488594 A0A1W2PQ67 120 aa19.07■□□□□ 0.64
GGPS1-206ENST00000488594 TRAFD1O14545 582 aaPredicted RBP19.07■□□□□ 0.64
GGPS1-206ENST00000488594 TEX33O43247 280 aa19.07■□□□□ 0.64
GGPS1-206ENST00000488594 CCL4P13236 92 aa19.07■□□□□ 0.64
GGPS1-206ENST00000488594 GM2AP17900 193 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms