RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 ENPP7Q6UWV6 458 aa12.34□□□□□ -0.43
TTC3-221ENST00000488522 TRIM72Q6ZMU5 477 aa12.34□□□□□ -0.43
TTC3-221ENST00000488522 USP53Q70EK8 1073 aa12.34□□□□□ -0.43
TTC3-221ENST00000488522 SPRED1Q7Z699 444 aa12.34□□□□□ -0.43
TTC3-221ENST00000488522 C17orf82Q86X59 251 aaPredicted RBP12.34□□□□□ -0.43
TTC3-221ENST00000488522 CNGA4Q8IV77 575 aa12.34□□□□□ -0.43
TTC3-221ENST00000488522 FAM172AQ8WUF8 416 aa12.34□□□□□ -0.43
TTC3-221ENST00000488522 SYN2Q92777 582 aaPredicted RBP12.34□□□□□ -0.43
TTC3-221ENST00000488522 ECHDC3Q96DC8 303 aa12.34□□□□□ -0.43
TTC3-221ENST00000488522 HMCESQ96FZ2 354 aa12.34□□□□□ -0.43
TTC3-221ENST00000488522 FAM117AQ9C073 453 aa12.34□□□□□ -0.43
TTC3-221ENST00000488522 SUV39H2Q9H5I1 410 aa12.34□□□□□ -0.43
TTC3-221ENST00000488522 AIPL1Q9NZN9 384 aa12.34□□□□□ -0.43
TTC3-221ENST00000488522 SEPT10Q9P0V9 454 aa12.34□□□□□ -0.43
TTC3-221ENST00000488522 ATP8A1Q9Y2Q0 1164 aa12.34□□□□□ -0.43
TTC3-221ENST00000488522 COQ6Q9Y2Z9 468 aa12.34□□□□□ -0.43
TTC3-221ENST00000488522 HEMK1Q9Y5R4 338 aaPredicted RBP12.34□□□□□ -0.43
TTC3-221ENST00000488522 PRAMEF33A0A0G2JMD5 474 aa12.33□□□□□ -0.44
TTC3-221ENST00000488522 TCRBV5S1A1TA0A578 114 aa12.33□□□□□ -0.44
TTC3-221ENST00000488522 RASA4BC9J798 803 aa12.33□□□□□ -0.44
TTC3-221ENST00000488522 AKR1B15C9JRZ8 316 aaPredicted RBP12.33□□□□□ -0.44
TTC3-221ENST00000488522 RASA4O43374 803 aa12.33□□□□□ -0.44
TTC3-221ENST00000488522 PRAMEF10O60809 474 aa12.33□□□□□ -0.44
TTC3-221ENST00000488522 MFAP3LO75121 409 aa12.33□□□□□ -0.44
TTC3-221ENST00000488522 PIGNO95427 931 aa12.33□□□□□ -0.44
TTC3-221ENST00000488522 TNFP01375 233 aa12.33□□□□□ -0.44
TTC3-221ENST00000488522 EPHB2P29323 1055 aa12.33□□□□□ -0.44
TTC3-221ENST00000488522 HTR7P34969 479 aa12.33□□□□□ -0.44
TTC3-221ENST00000488522 RFC1P35251 1148 aaPredicted RBP12.33□□□□□ -0.44
TTC3-221ENST00000488522 TRIM23P36406 574 aa12.33□□□□□ -0.44
TTC3-221ENST00000488522 ETV5P41161 510 aa12.33□□□□□ -0.44
TTC3-221ENST00000488522 LIG3P49916 1009 aa12.33□□□□□ -0.44
TTC3-221ENST00000488522 TBX2Q13207 712 aaPredicted RBP12.33□□□□□ -0.44
TTC3-221ENST00000488522 SRSF6Q13247 344 aaKnown RBP12.33□□□□□ -0.44
TTC3-221ENST00000488522 TSR1Q2NL82 804 aaKnown RBP12.33□□□□□ -0.44
TTC3-221ENST00000488522 C14orf28Q4W4Y0 310 aa12.33□□□□□ -0.44
TTC3-221ENST00000488522 ERAP2Q6P179 960 aa12.33□□□□□ -0.44
TTC3-221ENST00000488522 ATG14Q6ZNE5 492 aa12.33□□□□□ -0.44
TTC3-221ENST00000488522 NYAP1Q6ZVC0 841 aa12.33□□□□□ -0.44
TTC3-221ENST00000488522 PRICKLE2Q7Z3G6 844 aa12.33□□□□□ -0.44
TTC3-221ENST00000488522 ZNF438Q7Z4V0 828 aa12.33□□□□□ -0.44
TTC3-221ENST00000488522 SLFN11Q7Z7L1 901 aa12.33□□□□□ -0.44
TTC3-221ENST00000488522 ZSWIM9Q86XI8 627 aa12.33□□□□□ -0.44
TTC3-221ENST00000488522 JAMLQ86YT9 394 aa12.33□□□□□ -0.44
TTC3-221ENST00000488522 C3orf20Q8ND61 904 aa12.33□□□□□ -0.44
TTC3-221ENST00000488522 OR56A4Q8NGH8 313 aa12.33□□□□□ -0.44
TTC3-221ENST00000488522 SLC20A1Q8WUM9 679 aa12.33□□□□□ -0.44
TTC3-221ENST00000488522 OR1E3Q8WZA6 343 aa12.33□□□□□ -0.44
TTC3-221ENST00000488522 EXTL1Q92935 676 aa12.33□□□□□ -0.44
TTC3-221ENST00000488522 CMKLR1Q99788 373 aa12.33□□□□□ -0.44
TTC3-221ENST00000488522 C11orf70Q9BRQ4 267 aa12.33□□□□□ -0.44
TTC3-221ENST00000488522 LRRC19Q9H756 370 aa12.33□□□□□ -0.44
TTC3-221ENST00000488522 FGF22Q9HCT0 170 aa12.33□□□□□ -0.44
TTC3-221ENST00000488522 PISDQ9UG56 409 aa12.33□□□□□ -0.44
TTC3-221ENST00000488522 OR1A2Q9Y585 309 aa12.33□□□□□ -0.44
TTC3-221ENST00000488522 SDK2Q58EX2 2172 aa12.33□□□□□ -0.44
TTC3-221ENST00000488522 DOPEY2Q9Y3R5 2298 aa12.32□□□□□ -0.44
TTC3-221ENST00000488522 TMEM202A6NGA9 273 aa12.32□□□□□ -0.44
TTC3-221ENST00000488522 GOLGA6L6A8MZA4 724 aa12.32□□□□□ -0.44
TTC3-221ENST00000488522 C9orf172C9J069 976 aa12.32□□□□□ -0.44
TTC3-221ENST00000488522 FGF10O15520 208 aaPredicted RBP12.32□□□□□ -0.44
TTC3-221ENST00000488522 KRT3P12035 628 aa12.32□□□□□ -0.44
TTC3-221ENST00000488522 GM2AP17900 193 aa12.32□□□□□ -0.44
TTC3-221ENST00000488522 ITIH1P19827 911 aa12.32□□□□□ -0.44
TTC3-221ENST00000488522 XPAP23025 273 aaPredicted RBP12.32□□□□□ -0.44
TTC3-221ENST00000488522 KELP23276 732 aa12.32□□□□□ -0.44
TTC3-221ENST00000488522 SRSF1Q07955 248 aaKnown RBP eCLIP12.32□□□□□ -0.44
TTC3-221ENST00000488522 KLHL30Q0D2K2 578 aa12.32□□□□□ -0.44
TTC3-221ENST00000488522 RALGDSQ12967 914 aa12.32□□□□□ -0.44
TTC3-221ENST00000488522 EFHC2Q5JST6 749 aa12.32□□□□□ -0.44
TTC3-221ENST00000488522 MANEAQ5SRI9 462 aa12.32□□□□□ -0.44
TTC3-221ENST00000488522 AFMIDQ63HM1 303 aa12.32□□□□□ -0.44
TTC3-221ENST00000488522 E4F1Q66K89 784 aaPredicted RBP12.32□□□□□ -0.44
TTC3-221ENST00000488522 TMPRSS9Q7Z410 1059 aa12.32□□□□□ -0.44
TTC3-221ENST00000488522 IRF2BP2Q7Z5L9 587 aa12.32□□□□□ -0.44
TTC3-221ENST00000488522 PHF13Q86YI8 300 aaPredicted RBP12.32□□□□□ -0.44
TTC3-221ENST00000488522 PYROXD2Q8N2H3 581 aa12.32□□□□□ -0.44
TTC3-221ENST00000488522 OR8K1Q8NGG5 319 aa12.32□□□□□ -0.44
TTC3-221ENST00000488522 ANP32BQ92688 251 aaKnown RBP12.32□□□□□ -0.44
TTC3-221ENST00000488522 FUBP1Q96AE4 644 aaKnown RBP12.32□□□□□ -0.44
TTC3-221ENST00000488522 DNAJC7Q99615 494 aa12.32□□□□□ -0.44
TTC3-221ENST00000488522 NCAPGQ9BPX3 1015 aa12.32□□□□□ -0.44
TTC3-221ENST00000488522 CATSPERBQ9H7T0 1116 aa12.32□□□□□ -0.44
TTC3-221ENST00000488522 ABHD10Q9NUJ1 306 aa12.32□□□□□ -0.44
TTC3-221ENST00000488522 SEPT11Q9NVA2 429 aaKnown RBP12.32□□□□□ -0.44
TTC3-221ENST00000488522 ZNHIT6Q9NWK9 470 aaKnown RBP12.32□□□□□ -0.44
TTC3-221ENST00000488522 FOXJ2Q9P0K8 574 aa12.32□□□□□ -0.44
TTC3-221ENST00000488522 UBA2Q9UBT2 640 aaPredicted RBP12.32□□□□□ -0.44
TTC3-221ENST00000488522 FZD10Q9ULW2 581 aa12.32□□□□□ -0.44
TTC3-221ENST00000488522 PCDHGA3Q9Y5H0 932 aa12.32□□□□□ -0.44
TTC3-221ENST00000488522 RNF215Q9Y6U7 377 aa12.32□□□□□ -0.44
TTC3-221ENST00000488522 NBASA2RRP1 2371 aa12.32□□□□□ -0.44
TTC3-221ENST00000488522 FAM170AA1A519 330 aa12.31□□□□□ -0.44
TTC3-221ENST00000488522 SIGLEC16A6NMB1 481 aa12.31□□□□□ -0.44
TTC3-221ENST00000488522 CACNB4O00305 520 aaPredicted RBP12.31□□□□□ -0.44
TTC3-221ENST00000488522 HGSO14964 777 aaPredicted RBP12.31□□□□□ -0.44
TTC3-221ENST00000488522 BUB1BO60566 1050 aaPredicted RBP12.31□□□□□ -0.44
TTC3-221ENST00000488522 PRAMEF11O60813 436 aa12.31□□□□□ -0.44
TTC3-221ENST00000488522 RECQL5O94762 991 aaPredicted RBP12.31□□□□□ -0.44
TTC3-221ENST00000488522 SERPING1P05155 500 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms