RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 FUT11Q495W5 492 aa12.77□□□□□ -0.37
NELFE-209ENST00000488426 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.77□□□□□ -0.37
NELFE-209ENST00000488426 CALML6Q8TD86 181 aa12.77□□□□□ -0.37
NELFE-209ENST00000488426 OSCP1Q8WVF1 389 aa12.77□□□□□ -0.37
NELFE-209ENST00000488426 CKAP2Q8WWK9 683 aa12.77□□□□□ -0.37
NELFE-209ENST00000488426 ISL2Q96A47 359 aa12.77□□□□□ -0.37
NELFE-209ENST00000488426 ISG20Q96AZ6 181 aaKnown RBP12.77□□□□□ -0.37
NELFE-209ENST00000488426 NSMCE3Q96MG7 304 aa12.77□□□□□ -0.37
NELFE-209ENST00000488426 AGAP2Q99490 1192 aa12.77□□□□□ -0.37
NELFE-209ENST00000488426 MCMBPQ9BTE3 642 aa12.77□□□□□ -0.37
NELFE-209ENST00000488426 OBP2AQ9NY56 170 aa12.77□□□□□ -0.37
NELFE-209ENST00000488426 GTSE1Q9NYZ3 720 aa12.77□□□□□ -0.37
NELFE-209ENST00000488426 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.77□□□□□ -0.37
NELFE-209ENST00000488426 SLC2A6Q9UGQ3 507 aa12.77□□□□□ -0.37
NELFE-209ENST00000488426 CHKBQ9Y259 395 aa12.77□□□□□ -0.37
NELFE-209ENST00000488426 HS3ST2Q9Y278 367 aa12.77□□□□□ -0.37
NELFE-209ENST00000488426 MYOFQ9NZM1 2061 aa12.77□□□□□ -0.37
NELFE-209ENST00000488426 DCHS1Q96JQ0 3298 aa12.77□□□□□ -0.37
NELFE-209ENST00000488426 COL4A2P08572 1712 aa12.77□□□□□ -0.37
NELFE-209ENST00000488426 FAM186AA6NE01 2351 aa12.77□□□□□ -0.37
NELFE-209ENST00000488426 CCDC78A2IDD5 438 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 OTOL1A6NHN0 477 aaPredicted RBP12.76□□□□□ -0.37
NELFE-209ENST00000488426 COPEO14579 308 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 SLC7A4O43246 635 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 ASMTLO95671 621 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 CRTAMO95727 393 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 PRLP01236 227 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 NUBP1P53384 320 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 WDR4P57081 412 aaKnown RBP12.76□□□□□ -0.37
NELFE-209ENST00000488426 PFKPQ01813 784 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 PRKCQQ04759 706 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 THOC5Q13769 683 aaKnown RBP12.76□□□□□ -0.37
NELFE-209ENST00000488426 LRRC14Q15048 493 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 SEPT7Q16181 437 aaKnown RBP12.76□□□□□ -0.37
NELFE-209ENST00000488426 TXNDC11Q6PKC3 985 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 KIAA0408Q6ZU52 694 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 KIAA0907Q7Z7F0 614 aaPredicted RBP12.76□□□□□ -0.37
NELFE-209ENST00000488426 LMNTD2Q8IXW0 634 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 BCAS4Q8TDM0 211 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 RMDN1Q96DB5 314 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 KLF6Q99612 283 aaPredicted RBP12.76□□□□□ -0.37
NELFE-209ENST00000488426 DUS2Q9NX74 493 aaKnown RBP12.76□□□□□ -0.37
NELFE-209ENST00000488426 SLC25A13Q9UJS0 675 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 NDRG2Q9UN36 371 aaKnown RBP12.76□□□□□ -0.37
NELFE-209ENST00000488426 KIF26AQ9ULI4 1882 aaPredicted RBP12.76□□□□□ -0.37
NELFE-209ENST00000488426 DNAH14Q0VDD8 3507 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 K7ERQ8 282 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 HOXC11O43248 304 aaPredicted RBP12.76□□□□□ -0.37
NELFE-209ENST00000488426 SOCS5O75159 536 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 IGSF6O95976 241 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 FAM107AO95990 144 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 RPL26P61254 145 aaKnown RBP12.76□□□□□ -0.37
NELFE-209ENST00000488426 PDE1BQ01064 536 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 ILF2Q12905 390 aaKnown RBP12.76□□□□□ -0.37
NELFE-209ENST00000488426 TRAF2Q12933 501 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 NEPROQ6NW34 567 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 ASCL5Q7RTU5 278 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 GALNT7Q86SF2 657 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 OR13J1Q8NGT2 312 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 BLOC1S5Q8TDH9 187 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 BPIFB1Q8TDL5 484 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 TCP10LQ8TDR4 215 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 STYXQ8WUJ0 223 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 PTPRN2Q92932 1015 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 CHMP6Q96FZ7 201 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 SHDQ96IW2 340 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 MAGEB18Q96M61 343 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 ZNF317Q96PQ6 595 aaPredicted RBP12.76□□□□□ -0.37
NELFE-209ENST00000488426 CEP44Q9C0F1 390 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 IQCGQ9H095 443 aaKnown RBP12.76□□□□□ -0.37
NELFE-209ENST00000488426 RHOJQ9H4E5 214 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 RPL26L1Q9UNX3 145 aaKnown RBP12.76□□□□□ -0.37
NELFE-209ENST00000488426 PCDHGC4Q9Y5F7 938 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 ATG2BQ96BY7 2078 aa12.76□□□□□ -0.37
NELFE-209ENST00000488426 ANKRD66B4E2M5 251 aa12.75□□□□□ -0.37
NELFE-209ENST00000488426 SMAD6O43541 496 aaKnown RBP12.75□□□□□ -0.37
NELFE-209ENST00000488426 FZD6O60353 706 aa12.75□□□□□ -0.37
NELFE-209ENST00000488426 ADH1CP00326 375 aa12.75□□□□□ -0.37
NELFE-209ENST00000488426 ALDOAP04075 364 aaKnown RBP12.75□□□□□ -0.37
NELFE-209ENST00000488426 CYP17A1P05093 508 aa12.75□□□□□ -0.37
NELFE-209ENST00000488426 SRCP12931 536 aa12.75□□□□□ -0.37
NELFE-209ENST00000488426 PSMA3P25788 255 aa12.75□□□□□ -0.37
NELFE-209ENST00000488426 MAGEA12P43365 314 aa12.75□□□□□ -0.37
NELFE-209ENST00000488426 POLD2P49005 469 aa12.75□□□□□ -0.37
NELFE-209ENST00000488426 SERPINB8P50452 374 aa12.75□□□□□ -0.37
NELFE-209ENST00000488426 SEC24CP53992 1094 aa12.75□□□□□ -0.37
NELFE-209ENST00000488426 SNRPD1P62314 119 aaKnown RBP12.75□□□□□ -0.37
NELFE-209ENST00000488426 DHCR24Q15392 516 aa12.75□□□□□ -0.37
NELFE-209ENST00000488426 TAF1AQ15573 450 aaPredicted RBP12.75□□□□□ -0.37
NELFE-209ENST00000488426 SMAD1Q15797 465 aaKnown RBP12.75□□□□□ -0.37
NELFE-209ENST00000488426 EML3Q32P44 896 aa12.75□□□□□ -0.37
NELFE-209ENST00000488426 ATXN7L2Q5T6C5 722 aaPredicted RBP12.75□□□□□ -0.37
NELFE-209ENST00000488426 HHATQ5VTY9 493 aa12.75□□□□□ -0.37
NELFE-209ENST00000488426 TRIM68Q6AZZ1 485 aa12.75□□□□□ -0.37
NELFE-209ENST00000488426 TAX1BP1Q86VP1 789 aa12.75□□□□□ -0.37
NELFE-209ENST00000488426 C1orf210Q8IVY1 113 aa12.75□□□□□ -0.37
NELFE-209ENST00000488426 AHI1Q8N157 1196 aa12.75□□□□□ -0.37
NELFE-209ENST00000488426 NDUFAF2Q8N183 169 aa12.75□□□□□ -0.37
NELFE-209ENST00000488426 C2CD4AQ8NCU7 369 aaPredicted RBP12.75□□□□□ -0.37
NELFE-209ENST00000488426 LPCAT1Q8NF37 534 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms