RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 CR2P20023 1033 aa22.67■■□□□ 1.22
PTPN4-211ENST00000488279 TRIM23P36406 574 aa22.67■■□□□ 1.22
PTPN4-211ENST00000488279 SSR1P43307 286 aaKnown RBP22.67■■□□□ 1.22
PTPN4-211ENST00000488279 CDH6P55285 790 aa22.67■■□□□ 1.22
PTPN4-211ENST00000488279 KIAA1024LP59773 190 aa22.67■■□□□ 1.22
PTPN4-211ENST00000488279 SLC25A11Q02978 314 aaKnown RBP22.67■■□□□ 1.22
PTPN4-211ENST00000488279 KRT81Q14533 505 aa22.67■■□□□ 1.22
PTPN4-211ENST00000488279 CCDC122Q5T0U0 273 aa22.67■■□□□ 1.22
PTPN4-211ENST00000488279 MARC1Q5VT66 337 aa22.67■■□□□ 1.22
PTPN4-211ENST00000488279 PNCKQ6P2M8 343 aa22.67■■□□□ 1.22
PTPN4-211ENST00000488279 ALKBH5Q6P6C2 394 aaKnown RBP22.67■■□□□ 1.22
PTPN4-211ENST00000488279 PGBD5Q8N414 524 aa22.67■■□□□ 1.22
PTPN4-211ENST00000488279 HIC2Q96JB3 615 aa22.67■■□□□ 1.22
PTPN4-211ENST00000488279 MGME1Q9BQP7 344 aa22.67■■□□□ 1.22
PTPN4-211ENST00000488279 THSD1Q9NS62 852 aa22.67■■□□□ 1.22
PTPN4-211ENST00000488279 B4GALT6Q9UBX8 382 aa22.67■■□□□ 1.22
PTPN4-211ENST00000488279 SATB2Q9UPW6 733 aa22.67■■□□□ 1.22
PTPN4-211ENST00000488279 ENTPD2Q9Y5L3 495 aa22.67■■□□□ 1.22
PTPN4-211ENST00000488279 ASXL3Q9C0F0 2248 aa22.67■■□□□ 1.22
PTPN4-211ENST00000488279 TMEM202A6NGA9 273 aa22.66■■□□□ 1.22
PTPN4-211ENST00000488279 EIF4E1BA6NMX2 242 aaKnown RBP22.66■■□□□ 1.22
PTPN4-211ENST00000488279 PDE2AO00408 941 aaPredicted RBP22.66■■□□□ 1.22
PTPN4-211ENST00000488279 TNFRSF10CO14798 259 aa22.66■■□□□ 1.22
PTPN4-211ENST00000488279 RBMS1P29558 406 aaKnown RBP22.66■■□□□ 1.22
PTPN4-211ENST00000488279 TLE3Q04726 772 aa22.66■■□□□ 1.22
PTPN4-211ENST00000488279 SPIDRQ14159 915 aa22.66■■□□□ 1.22
PTPN4-211ENST00000488279 HADHQ16836 314 aaKnown RBP22.66■■□□□ 1.22
PTPN4-211ENST00000488279 C3orf38Q5JPI3 329 aa22.66■■□□□ 1.22
PTPN4-211ENST00000488279 RALGPS1Q5JS13 557 aa22.66■■□□□ 1.22
PTPN4-211ENST00000488279 NYAP1Q6ZVC0 841 aa22.66■■□□□ 1.22
PTPN4-211ENST00000488279 LRRC49Q8IUZ0 686 aa22.66■■□□□ 1.22
PTPN4-211ENST00000488279 SPACA3Q8IXA5 215 aa22.66■■□□□ 1.22
PTPN4-211ENST00000488279 KYQ8NBH2 561 aa22.66■■□□□ 1.22
PTPN4-211ENST00000488279 OR6C4Q8NGE1 309 aa22.66■■□□□ 1.22
PTPN4-211ENST00000488279 KCTD5Q9NXV2 234 aa22.66■■□□□ 1.22
PTPN4-211ENST00000488279 RCOR3Q9P2K3 495 aaPredicted RBP22.66■■□□□ 1.22
PTPN4-211ENST00000488279 PHTF1Q9UMS5 762 aa22.66■■□□□ 1.22
PTPN4-211ENST00000488279 GM2AP17900 193 aa22.65■■□□□ 1.22
PTPN4-211ENST00000488279 IL4RP24394 825 aa22.65■■□□□ 1.22
PTPN4-211ENST00000488279 MMP13P45452 471 aa22.65■■□□□ 1.22
PTPN4-211ENST00000488279 IGF2-ASQ6U949 168 aa22.65■■□□□ 1.22
PTPN4-211ENST00000488279 OR1E3Q8WZA6 343 aa22.65■■□□□ 1.22
PTPN4-211ENST00000488279 PDXPQ96GD0 296 aa22.65■■□□□ 1.22
PTPN4-211ENST00000488279 NAF1Q96HR8 494 aaKnown RBP22.65■■□□□ 1.22
PTPN4-211ENST00000488279 COQ10AQ96MF6 247 aa22.65■■□□□ 1.22
PTPN4-211ENST00000488279 SLC46A1Q96NT5 459 aa22.65■■□□□ 1.22
PTPN4-211ENST00000488279 FCRL3Q96P31 734 aaPredicted RBP22.65■■□□□ 1.22
PTPN4-211ENST00000488279 BBC3Q96PG8 261 aaPredicted RBP22.65■■□□□ 1.22
PTPN4-211ENST00000488279 WDR26Q9H7D7 661 aa22.65■■□□□ 1.22
PTPN4-211ENST00000488279 SYNDIG1Q9H7V2 258 aa22.65■■□□□ 1.22
PTPN4-211ENST00000488279 IFNKQ9P0W0 207 aa22.65■■□□□ 1.22
PTPN4-211ENST00000488279 CPP00450 1065 aa22.64■■□□□ 1.21
PTPN4-211ENST00000488279 CYP2A6P11509 494 aaPredicted RBP22.64■■□□□ 1.21
PTPN4-211ENST00000488279 VIPR1P32241 457 aa22.64■■□□□ 1.21
PTPN4-211ENST00000488279 MAXP61244 160 aa22.64■■□□□ 1.21
PTPN4-211ENST00000488279 KCTD16Q68DU8 428 aa22.64■■□□□ 1.21
PTPN4-211ENST00000488279 TAF8Q7Z7C8 310 aa22.64■■□□□ 1.21
PTPN4-211ENST00000488279 FAM46DQ8NEK8 389 aa22.64■■□□□ 1.21
PTPN4-211ENST00000488279 CCDC74AQ96AQ1 378 aa22.64■■□□□ 1.21
PTPN4-211ENST00000488279 NUS1Q96E22 293 aa22.64■■□□□ 1.21
PTPN4-211ENST00000488279 UBL7Q96S82 380 aaPredicted RBP22.64■■□□□ 1.21
PTPN4-211ENST00000488279 LGR4Q9BXB1 951 aa22.64■■□□□ 1.21
PTPN4-211ENST00000488279 FGF22Q9HCT0 170 aa22.64■■□□□ 1.21
PTPN4-211ENST00000488279 ASCL3Q9NQ33 180 aa22.64■■□□□ 1.21
PTPN4-211ENST00000488279 MRPL40Q9NQ50 206 aaKnown RBP22.64■■□□□ 1.21
PTPN4-211ENST00000488279 PCDHGA8Q9Y5G5 932 aa22.64■■□□□ 1.21
PTPN4-211ENST00000488279 NTN3O00634 580 aaPredicted RBP22.63■■□□□ 1.21
PTPN4-211ENST00000488279 CASC3O15234 703 aaKnown RBP22.63■■□□□ 1.21
PTPN4-211ENST00000488279 HEXIM1O94992 359 aaKnown RBP22.63■■□□□ 1.21
PTPN4-211ENST00000488279 GYPCP04921 128 aa22.63■■□□□ 1.21
PTPN4-211ENST00000488279 MMRN1Q13201 1228 aa22.63■■□□□ 1.21
PTPN4-211ENST00000488279 CNGA3Q16281 694 aa22.63■■□□□ 1.21
PTPN4-211ENST00000488279 DENND2CQ68D51 928 aa22.63■■□□□ 1.21
PTPN4-211ENST00000488279 WDR36Q8NI36 951 aaKnown RBP22.63■■□□□ 1.21
PTPN4-211ENST00000488279 ZNF564Q8TBZ8 553 aaPredicted RBP22.63■■□□□ 1.21
PTPN4-211ENST00000488279 FAM71BQ8TC56 605 aa22.63■■□□□ 1.21
PTPN4-211ENST00000488279 CYP4F12Q9HCS2 524 aa22.63■■□□□ 1.21
PTPN4-211ENST00000488279 MOSPD1Q9UJG1 213 aa22.63■■□□□ 1.21
PTPN4-211ENST00000488279 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.63■■□□□ 1.21
PTPN4-211ENST00000488279 A0A1W2PNU3 283 aaPredicted RBP22.62■■□□□ 1.21
PTPN4-211ENST00000488279 PGLSO95336 258 aa22.62■■□□□ 1.21
PTPN4-211ENST00000488279 TPM3P06753 285 aa22.62■■□□□ 1.21
PTPN4-211ENST00000488279 CD48P09326 243 aa22.62■■□□□ 1.21
PTPN4-211ENST00000488279 CASP14P31944 242 aa22.62■■□□□ 1.21
PTPN4-211ENST00000488279 TRAF2Q12933 501 aa22.62■■□□□ 1.21
PTPN4-211ENST00000488279 TSR1Q2NL82 804 aaKnown RBP22.62■■□□□ 1.21
PTPN4-211ENST00000488279 ARMC12Q5T9G4 340 aa22.62■■□□□ 1.21
PTPN4-211ENST00000488279 BROXQ5VW32 411 aa22.62■■□□□ 1.21
PTPN4-211ENST00000488279 FOXR1Q6PIV2 292 aa22.62■■□□□ 1.21
PTPN4-211ENST00000488279 OGFOD3Q6PK18 319 aa22.62■■□□□ 1.21
PTPN4-211ENST00000488279 GPR155Q7Z3F1 870 aa22.62■■□□□ 1.21
PTPN4-211ENST00000488279 CBARPQ8N350 705 aaPredicted RBP22.62■■□□□ 1.21
PTPN4-211ENST00000488279 ARL14Q8N4G2 192 aa22.62■■□□□ 1.21
PTPN4-211ENST00000488279 TEX26Q8N6G2 289 aa22.62■■□□□ 1.21
PTPN4-211ENST00000488279 KCTD6Q8NC69 237 aa22.62■■□□□ 1.21
PTPN4-211ENST00000488279 GPR156Q8NFN8 814 aa22.62■■□□□ 1.21
PTPN4-211ENST00000488279 SCRN2Q96FV2 425 aa22.62■■□□□ 1.21
PTPN4-211ENST00000488279 GFM1Q96RP9 751 aaKnown RBP22.62■■□□□ 1.21
PTPN4-211ENST00000488279 DPH1Q9BZG8 443 aa22.62■■□□□ 1.21
PTPN4-211ENST00000488279 TMEM168Q9H0V1 697 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms