RNA–Protein interactions for RNA: ENST00000488277.1

EPB41-211, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 3

Gene EPB41, Length 262 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-211ENST00000488277 LILRB1Q8NHL6 650 aaPredicted RBP2.53□□□□□ -2
EPB41-211ENST00000488277 LMLNQ96KR4 655 aa2.53□□□□□ -2
EPB41-211ENST00000488277 OR1F2PQ96R84 312 aa2.53□□□□□ -2
EPB41-211ENST00000488277 H2AFJQ9BTM1 129 aa2.53□□□□□ -2
EPB41-211ENST00000488277 C1QTNF4Q9BXJ3 329 aa2.53□□□□□ -2
EPB41-211ENST00000488277 WDR26Q9H7D7 661 aa2.53□□□□□ -2
EPB41-211ENST00000488277 MAGEE1Q9HCI5 957 aa2.53□□□□□ -2
EPB41-211ENST00000488277 PREBQ9HCU5 417 aa2.53□□□□□ -2
EPB41-211ENST00000488277 BPIFA1Q9NP55 256 aa2.53□□□□□ -2
EPB41-211ENST00000488277 DDX4Q9NQI0 724 aaKnown RBP2.53□□□□□ -2
EPB41-211ENST00000488277 PCDHB16Q9NRJ7 776 aa2.53□□□□□ -2
EPB41-211ENST00000488277 BLOC1S4Q9NUP1 217 aa2.53□□□□□ -2
EPB41-211ENST00000488277 KCND2Q9NZV8 630 aa2.53□□□□□ -2
EPB41-211ENST00000488277 MPP6Q9NZW5 540 aa2.53□□□□□ -2
EPB41-211ENST00000488277 ORC3Q9UBD5 711 aaPredicted RBP2.53□□□□□ -2
EPB41-211ENST00000488277 SLC9A2Q9UBY0 812 aa2.53□□□□□ -2
EPB41-211ENST00000488277 MALT1Q9UDY8 824 aa2.53□□□□□ -2
EPB41-211ENST00000488277 SARDHQ9UL12 918 aa2.53□□□□□ -2
EPB41-211ENST00000488277 A4GNTQ9UNA3 340 aa2.53□□□□□ -2
EPB41-211ENST00000488277 SNX9Q9Y5X1 595 aa2.53□□□□□ -2
EPB41-211ENST00000488277 NFS1Q9Y697 457 aa2.53□□□□□ -2
EPB41-211ENST00000488277 CYP46A1Q9Y6A2 500 aa2.53□□□□□ -2
EPB41-211ENST00000488277 DENND3A2RUS2 1198 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 SRRM3A6NNA2 597 aaPredicted RBP2.52□□□□□ -2.01
EPB41-211ENST00000488277 SMTNL1A8MU46 457 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 RTN3O95197 1032 aaPredicted RBP2.52□□□□□ -2.01
EPB41-211ENST00000488277 F9P00740 461 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 AFPP02771 609 aaKnown RBP2.52□□□□□ -2.01
EPB41-211ENST00000488277 CENPBP07199 599 aaPredicted RBP2.52□□□□□ -2.01
EPB41-211ENST00000488277 CAPN3P20807 821 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 AGAP20933 346 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 HNRNPH1P31943 449 aaKnown RBP2.52□□□□□ -2.01
EPB41-211ENST00000488277 STX2P32856 288 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 ABCD1P33897 745 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 SHMT1P34896 483 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 ARL1P40616 181 aaPredicted RBP2.52□□□□□ -2.01
EPB41-211ENST00000488277 HARS2P49590 506 aaKnown RBP2.52□□□□□ -2.01
EPB41-211ENST00000488277 CTCFP49711 727 aaPredicted RBP2.52□□□□□ -2.01
EPB41-211ENST00000488277 GNAQP50148 359 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 GAS1P54826 345 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 RPL36AP83881 106 aaKnown RBP2.52□□□□□ -2.01
EPB41-211ENST00000488277 EEF1A2Q05639 463 aaKnown RBP2.52□□□□□ -2.01
EPB41-211ENST00000488277 DLG1Q12959 904 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 TOMM20Q15388 145 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 EFNB3Q15768 340 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 CALCRLQ16602 461 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 PRICKLE4Q2TBC4 344 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 SGO1Q5FBB7 561 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 PPP6R3Q5H9R7 873 aaPredicted RBP2.52□□□□□ -2.01
EPB41-211ENST00000488277 SPSB3Q6PJ21 355 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 FBXO46Q6PJ61 603 aaPredicted RBP2.52□□□□□ -2.01
EPB41-211ENST00000488277 B3GNT6Q6ZMB0 384 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 SLC35F3Q8IY50 421 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 DSELQ8IZU8 1212 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 ZBTB2Q8N680 514 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 RBMXL3Q8N7X1 1067 aaKnown RBP2.52□□□□□ -2.01
EPB41-211ENST00000488277 ANKRD52Q8NB46 1076 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 ZNF114Q8NC26 417 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 AGBL3Q8NEM8 1001 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 BEST2Q8NFU1 509 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 CADM4Q8NFZ8 388 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 NFKBIDQ8NI38 313 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 CREB3L4Q8TEY5 395 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 SCMH1Q96GD3 660 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 IGSF21Q96ID5 467 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 DUX5Q96PT3 197 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 CSF3RQ99062 836 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 KXD1Q9BQD3 176 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 CHCHD6Q9BRQ6 235 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 CENPOQ9BU64 300 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 GAREM1Q9H706 876 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 NOX4Q9NPH5 578 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 PLSCR4Q9NRQ2 329 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 OLA1Q9NTK5 396 aaKnown RBP2.52□□□□□ -2.01
EPB41-211ENST00000488277 SLCO3A1Q9UIG8 710 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 RCOR1Q9UKL0 485 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 NAALADL1Q9UQQ1 740 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 LSM4Q9Y4Z0 139 aaKnown RBP2.52□□□□□ -2.01
EPB41-211ENST00000488277 SCINQ9Y6U3 715 aa2.52□□□□□ -2.01
EPB41-211ENST00000488277 ATXN2Q99700 1313 aaKnown RBP2.51□□□□□ -2.01
EPB41-211ENST00000488277 SAA2-SAA4A0A096LPE2 208 aa2.51□□□□□ -2.01
EPB41-211ENST00000488277 CPED1A4D0V7 1026 aa2.51□□□□□ -2.01
EPB41-211ENST00000488277 TMEM202A6NGA9 273 aa2.51□□□□□ -2.01
EPB41-211ENST00000488277 TTC36A6NLP5 189 aa2.51□□□□□ -2.01
EPB41-211ENST00000488277 LRRC53A6NM62 1247 aa2.51□□□□□ -2.01
EPB41-211ENST00000488277 PRR23D1E9PI22 279 aaPredicted RBP2.51□□□□□ -2.01
EPB41-211ENST00000488277 SNAP23O00161 211 aa2.51□□□□□ -2.01
EPB41-211ENST00000488277 SOCS6O14544 535 aa2.51□□□□□ -2.01
EPB41-211ENST00000488277 SLC16A5O15375 505 aa2.51□□□□□ -2.01
EPB41-211ENST00000488277 TNFSF14O43557 240 aa2.51□□□□□ -2.01
EPB41-211ENST00000488277 NDUFS7O75251 213 aa2.51□□□□□ -2.01
EPB41-211ENST00000488277 RNASEH2AO75792 299 aaKnown RBP2.51□□□□□ -2.01
EPB41-211ENST00000488277 GAGE7O76087 117 aa2.51□□□□□ -2.01
EPB41-211ENST00000488277 GFPT2O94808 682 aa2.51□□□□□ -2.01
EPB41-211ENST00000488277 KDM4BO94953 1096 aa2.51□□□□□ -2.01
EPB41-211ENST00000488277 LDHCP07864 332 aa2.51□□□□□ -2.01
EPB41-211ENST00000488277 CYC1P08574 325 aa2.51□□□□□ -2.01
EPB41-211ENST00000488277 GAGE12FP0CL80 117 aa2.51□□□□□ -2.01
EPB41-211ENST00000488277 GAGE12GP0CL81 117 aa2.51□□□□□ -2.01
EPB41-211ENST00000488277 GAGE12IP0CL82 117 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms