RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 EPB41L5Q9HCM4 733 aa8.59□□□□□ -1.03
PRKCB-208ENST00000487674 ATXN7L1Q9ULK2 861 aaPredicted RBP8.59□□□□□ -1.03
PRKCB-208ENST00000487674 AP4E1Q9UPM8 1137 aa8.59□□□□□ -1.03
PRKCB-208ENST00000487674 PCDHGA7Q9Y5G6 932 aa8.59□□□□□ -1.03
PRKCB-208ENST00000487674 DGKBQ9Y6T7 804 aa8.59□□□□□ -1.03
PRKCB-208ENST00000487674 TTC24A2A3L6 582 aaPredicted RBP8.58□□□□□ -1.04
PRKCB-208ENST00000487674 J3KR12 359 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 CACNB4O00305 520 aaPredicted RBP8.58□□□□□ -1.04
PRKCB-208ENST00000487674 EEF2KO00418 725 aaKnown RBP8.58□□□□□ -1.04
PRKCB-208ENST00000487674 BUB1BO60566 1050 aaPredicted RBP8.58□□□□□ -1.04
PRKCB-208ENST00000487674 PALMO75781 387 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 ZIC2O95409 532 aaPredicted RBP8.58□□□□□ -1.04
PRKCB-208ENST00000487674 ELFN1P0C7U0 828 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 FERP16591 822 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 KELP23276 732 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 PSMA2P25787 234 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 UGT1A5P35504 534 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 RGRP47804 291 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 INHBCP55103 352 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 UBXN1Q04323 297 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 RALGDSQ12967 914 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 RFTN1Q14699 578 aaPredicted RBP8.58□□□□□ -1.04
PRKCB-208ENST00000487674 TCEA2Q15560 299 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 STX1AQ16623 288 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 CERCAMQ5T4B2 595 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 AFMIDQ63HM1 303 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 KCTD16Q68DU8 428 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 ACAD10Q6JQN1 1059 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 CCDC81Q6ZN84 652 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 CLEC17AQ6ZS10 378 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 RFX8Q6ZV50 586 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 RAB11FIP2Q7L804 512 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 SRLQ86TD4 932 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 CCNJLQ8IV13 435 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 TSEN2Q8NCE0 465 aaKnown RBP8.58□□□□□ -1.04
PRKCB-208ENST00000487674 GPR156Q8NFN8 814 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 OR56A4Q8NGH8 313 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 ECHDC3Q96DC8 303 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 MED8Q96G25 268 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 TMEM74Q96NL1 305 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 CINPQ9BW66 212 aaPredicted RBP8.58□□□□□ -1.04
PRKCB-208ENST00000487674 FOXP3Q9BZS1 431 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 SLC39A8Q9C0K1 460 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 LRRN3Q9H3W5 708 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 DHX35Q9H5Z1 703 aaKnown RBP8.58□□□□□ -1.04
PRKCB-208ENST00000487674 SP110Q9HB58 689 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 FGF22Q9HCT0 170 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 LMBRD1Q9NUN5 540 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 PARVAQ9NVD7 372 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 ANO10Q9NW15 660 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 GPATCH2LQ9NWQ4 482 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 ACSL6Q9UKU0 697 aa8.58□□□□□ -1.04
PRKCB-208ENST00000487674 A0A1W2PQM1 296 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 TMEM202A6NGA9 273 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 LRRC10BA6NIK2 292 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 J3QKU1 62 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 TNFRSF10CO14798 259 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 DAPK3O43293 454 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 RECQL5O94762 991 aaPredicted RBP8.57□□□□□ -1.04
PRKCB-208ENST00000487674 TNFP01375 233 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 PRKCGP05129 697 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 HOXC4P09017 264 aaPredicted RBP8.57□□□□□ -1.04
PRKCB-208ENST00000487674 PNLIPP16233 465 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 GLB1P16278 677 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 SLC5A2P31639 672 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 PAPOLAP51003 745 aaKnown RBP8.57□□□□□ -1.04
PRKCB-208ENST00000487674 ZNF135P52742 658 aaPredicted RBP8.57□□□□□ -1.04
PRKCB-208ENST00000487674 AP1S1P61966 158 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 POLR2LP62875 67 aaKnown RBP8.57□□□□□ -1.04
PRKCB-208ENST00000487674 CCL7P80098 99 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 BCL2L1Q07817 233 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 IL10RBQ08334 325 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 NSUN2Q08J23 767 aaKnown RBP eCLIP8.57□□□□□ -1.04
PRKCB-208ENST00000487674 MAMLD1Q13495 774 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 LY6DQ14210 128 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 CA9Q16790 459 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 ZSCAN23Q3MJ62 389 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 C14orf28Q4W4Y0 310 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 PLEKHA7Q6IQ23 1121 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 SASS6Q6UVJ0 657 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 LIPIQ6XZB0 460 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 DPPA4Q7L190 304 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 APTXQ7Z2E3 356 aaKnown RBP8.57□□□□□ -1.04
PRKCB-208ENST00000487674 SPRED1Q7Z699 444 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 JAMLQ86YT9 394 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 PSTKQ8IV42 348 aaKnown RBP8.57□□□□□ -1.04
PRKCB-208ENST00000487674 ARHGAP12Q8IWW6 846 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 PARP9Q8IXQ6 854 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 FBXO39Q8N4B4 442 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 NPWQ8N729 165 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 PAF1Q8N7H5 531 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 PLA2G15Q8NCC3 412 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 OR1E3Q8WZA6 343 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 FUBP1Q96AE4 644 aaKnown RBP8.57□□□□□ -1.04
PRKCB-208ENST00000487674 TMEM159Q96B96 161 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 PSKH2Q96QS6 385 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 CCNL2Q96S94 520 aaPredicted RBP8.57□□□□□ -1.04
PRKCB-208ENST00000487674 PEBP4Q96S96 227 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 SYT11Q9BT88 431 aa8.57□□□□□ -1.04
PRKCB-208ENST00000487674 SNRNP25Q9BV90 132 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms