RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 SEPT5Q99719 369 aaPredicted RBP26.2■■□□□ 1.78
HLA-C-208ENST00000487245 OLFM1Q99784 485 aa26.2■■□□□ 1.78
HLA-C-208ENST00000487245 POLR1EQ9GZS1 481 aaKnown RBP26.2■■□□□ 1.78
HLA-C-208ENST00000487245 UXTQ9UBK9 157 aaPredicted RBP26.2■■□□□ 1.78
HLA-C-208ENST00000487245 SARDHQ9UL12 918 aa26.2■■□□□ 1.78
HLA-C-208ENST00000487245 SLC27A5Q9Y2P5 690 aa26.2■■□□□ 1.78
HLA-C-208ENST00000487245 A8MT66 165 aa26.19■■□□□ 1.78
HLA-C-208ENST00000487245 TRIM38O00635 465 aa26.19■■□□□ 1.78
HLA-C-208ENST00000487245 ACOT8O14734 319 aa26.19■■□□□ 1.78
HLA-C-208ENST00000487245 TBC1D4O60343 1298 aa26.19■■□□□ 1.78
HLA-C-208ENST00000487245 PRAMEF11O60813 436 aa26.19■■□□□ 1.78
HLA-C-208ENST00000487245 IPO13O94829 963 aaKnown RBP26.19■■□□□ 1.78
HLA-C-208ENST00000487245 EPOP01588 193 aa26.19■■□□□ 1.78
HLA-C-208ENST00000487245 ENO3P13929 434 aaPredicted RBP26.19■■□□□ 1.78
HLA-C-208ENST00000487245 OR1E1P30953 314 aa26.19■■□□□ 1.78
HLA-C-208ENST00000487245 CHN2P52757 468 aa26.19■■□□□ 1.78
HLA-C-208ENST00000487245 NOGQ13253 232 aa26.19■■□□□ 1.78
HLA-C-208ENST00000487245 ACAP2Q15057 778 aa26.19■■□□□ 1.78
HLA-C-208ENST00000487245 FUT10Q6P4F1 479 aa26.19■■□□□ 1.78
HLA-C-208ENST00000487245 CILP2Q8IUL8 1156 aa26.19■■□□□ 1.78
HLA-C-208ENST00000487245 REM2Q8IYK8 340 aaPredicted RBP26.19■■□□□ 1.78
HLA-C-208ENST00000487245 SPATA6LQ8N4H0 392 aa26.19■■□□□ 1.78
HLA-C-208ENST00000487245 FEM1CQ96JP0 617 aa26.19■■□□□ 1.78
HLA-C-208ENST00000487245 LRGUKQ96M69 825 aa26.19■■□□□ 1.78
HLA-C-208ENST00000487245 SEZ6LQ9BYH1 1024 aa26.19■■□□□ 1.78
HLA-C-208ENST00000487245 Q9H521 79 aa26.19■■□□□ 1.78
HLA-C-208ENST00000487245 TMEM233B4DJY2 109 aa26.19■■□□□ 1.78
HLA-C-208ENST00000487245 HOXA2O43364 376 aa26.19■■□□□ 1.78
HLA-C-208ENST00000487245 HMBSP08397 361 aa26.19■■□□□ 1.78
HLA-C-208ENST00000487245 HOXB8P17481 243 aaPredicted RBP26.19■■□□□ 1.78
HLA-C-208ENST00000487245 HLA-DPA1P20036 260 aa26.19■■□□□ 1.78
HLA-C-208ENST00000487245 TACR2P21452 398 aa26.19■■□□□ 1.78
HLA-C-208ENST00000487245 PRAMEP78395 509 aa26.19■■□□□ 1.78
HLA-C-208ENST00000487245 MS4A2Q01362 244 aa26.19■■□□□ 1.78
HLA-C-208ENST00000487245 CSHL1Q14406 222 aa26.19■■□□□ 1.78
HLA-C-208ENST00000487245 RAET1EQ8TD07 263 aa26.19■■□□□ 1.78
HLA-C-208ENST00000487245 TOP1MTQ969P6 601 aa26.19■■□□□ 1.78
HLA-C-208ENST00000487245 CEP295NLQ96MC4 621 aa26.19■■□□□ 1.78
HLA-C-208ENST00000487245 TMEM175Q9BSA9 504 aa26.19■■□□□ 1.78
HLA-C-208ENST00000487245 TRMOQ9BU70 441 aa26.19■■□□□ 1.78
HLA-C-208ENST00000487245 MARCH5Q9NX47 278 aa26.19■■□□□ 1.78
HLA-C-208ENST00000487245 GTSE1Q9NYZ3 720 aa26.19■■□□□ 1.78
HLA-C-208ENST00000487245 LRFN2Q9ULH4 789 aa26.19■■□□□ 1.78
HLA-C-208ENST00000487245 VWA7Q9Y334 891 aa26.19■■□□□ 1.78
HLA-C-208ENST00000487245 AURKAO14965 403 aa26.18■■□□□ 1.78
HLA-C-208ENST00000487245 FGF1P05230 155 aa26.18■■□□□ 1.78
HLA-C-208ENST00000487245 SLC11A1P49279 550 aa26.18■■□□□ 1.78
HLA-C-208ENST00000487245 STX5Q13190 355 aa26.18■■□□□ 1.78
HLA-C-208ENST00000487245 BFSP2Q13515 415 aa26.18■■□□□ 1.78
HLA-C-208ENST00000487245 C5orf22Q49AR2 442 aa26.18■■□□□ 1.78
HLA-C-208ENST00000487245 THEMIS2Q5TEJ8 643 aa26.18■■□□□ 1.78
HLA-C-208ENST00000487245 HECTD2Q5U5R9 776 aa26.18■■□□□ 1.78
HLA-C-208ENST00000487245 RNF19BQ6ZMZ0 732 aa26.18■■□□□ 1.78
HLA-C-208ENST00000487245 ANKS3Q6ZW76 656 aa26.18■■□□□ 1.78
HLA-C-208ENST00000487245 PGBD5Q8N414 524 aa26.18■■□□□ 1.78
HLA-C-208ENST00000487245 MRPL1Q9BYD6 325 aaKnown RBP26.18■■□□□ 1.78
HLA-C-208ENST00000487245 EPB41L1Q9H4G0 881 aa26.18■■□□□ 1.78
HLA-C-208ENST00000487245 PACSIN3Q9UKS6 424 aa26.18■■□□□ 1.78
HLA-C-208ENST00000487245 RIMKLBQ9ULI2 386 aa26.18■■□□□ 1.78
HLA-C-208ENST00000487245 SOAT2O75908 522 aa26.17■■□□□ 1.78
HLA-C-208ENST00000487245 ATXN1LP0C7T5 689 aaKnown RBP26.17■■□□□ 1.78
HLA-C-208ENST00000487245 PABPC4LP0CB38 370 aaKnown RBP26.17■■□□□ 1.78
HLA-C-208ENST00000487245 PKNOX1P55347 436 aa26.17■■□□□ 1.78
HLA-C-208ENST00000487245 MRPS22P82650 360 aaKnown RBP26.17■■□□□ 1.78
HLA-C-208ENST00000487245 PTK2BQ14289 1009 aa26.17■■□□□ 1.78
HLA-C-208ENST00000487245 FBXL19Q6PCT2 694 aa26.17■■□□□ 1.78
HLA-C-208ENST00000487245 BBS5Q8N3I7 341 aa26.17■■□□□ 1.78
HLA-C-208ENST00000487245 BHLHE22Q8NFJ8 381 aaPredicted RBP26.17■■□□□ 1.78
HLA-C-208ENST00000487245 OR6P1Q8NGX9 317 aa26.17■■□□□ 1.78
HLA-C-208ENST00000487245 SGF29Q96ES7 293 aa26.17■■□□□ 1.78
HLA-C-208ENST00000487245 SPATA16Q9BXB7 569 aa26.17■■□□□ 1.78
HLA-C-208ENST00000487245 SUCOQ9UBS9 1254 aaKnown RBP26.17■■□□□ 1.78
HLA-C-208ENST00000487245 SLC4A7Q9Y6M7 1214 aa26.17■■□□□ 1.78
HLA-C-208ENST00000487245 CAPN8A6NHC0 703 aa26.17■■□□□ 1.78
HLA-C-208ENST00000487245 F5H5T6 163 aa26.17■■□□□ 1.78
HLA-C-208ENST00000487245 CFLARO15519 480 aa26.17■■□□□ 1.78
HLA-C-208ENST00000487245 ACVR1Q04771 509 aa26.17■■□□□ 1.78
HLA-C-208ENST00000487245 ZNF235Q14590 738 aa26.17■■□□□ 1.78
HLA-C-208ENST00000487245 ZNF789Q5FWF6 425 aa26.17■■□□□ 1.78
HLA-C-208ENST00000487245 HDAC10Q969S8 669 aa26.17■■□□□ 1.78
HLA-C-208ENST00000487245 MARK4Q96L34 752 aa26.17■■□□□ 1.78
HLA-C-208ENST00000487245 SEMA3CQ99985 751 aa26.17■■□□□ 1.78
HLA-C-208ENST00000487245 TTLL2Q9BWV7 592 aa26.17■■□□□ 1.78
HLA-C-208ENST00000487245 MRPL9Q9BYD2 267 aaKnown RBP26.17■■□□□ 1.78
HLA-C-208ENST00000487245 NEMP2A6NFY4 417 aa26.16■■□□□ 1.78
HLA-C-208ENST00000487245 TLR5O60602 858 aa26.16■■□□□ 1.78
HLA-C-208ENST00000487245 CALRP27797 417 aaKnown RBP26.16■■□□□ 1.78
HLA-C-208ENST00000487245 ATP4BP51164 291 aa26.16■■□□□ 1.78
HLA-C-208ENST00000487245 LHX8Q68G74 356 aa26.16■■□□□ 1.78
HLA-C-208ENST00000487245 FAM45BPQ6NSW5 357 aa26.16■■□□□ 1.78
HLA-C-208ENST00000487245 PTAR1Q7Z6K3 402 aaPredicted RBP26.16■■□□□ 1.78
HLA-C-208ENST00000487245 CUZD1Q86UP6 607 aa26.16■■□□□ 1.78
HLA-C-208ENST00000487245 FAM45AQ8TCE6 357 aa26.16■■□□□ 1.78
HLA-C-208ENST00000487245 SEPT8Q92599 483 aa26.16■■□□□ 1.78
HLA-C-208ENST00000487245 L3HYPDHQ96EM0 354 aa26.16■■□□□ 1.78
HLA-C-208ENST00000487245 SH3GL3Q99963 347 aa26.16■■□□□ 1.78
HLA-C-208ENST00000487245 MAGEH1Q9H213 219 aa26.16■■□□□ 1.78
HLA-C-208ENST00000487245 NDUFA13Q9P0J0 144 aa26.16■■□□□ 1.78
HLA-C-208ENST00000487245 CNOT11Q9UKZ1 510 aaKnown RBP26.16■■□□□ 1.78
HLA-C-208ENST00000487245 GREB1Q4ZG55 1949 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms