RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 NPLQ9BXD5 320 aaPredicted RBP12.42□□□□□ -0.42
HSPG2-211ENST00000486901 MAP10Q9P2G4 905 aa12.42□□□□□ -0.42
HSPG2-211ENST00000486901 VTI1BQ9UEU0 232 aa12.42□□□□□ -0.42
HSPG2-211ENST00000486901 TARM1B6A8C7 271 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 NOBOXO60393 691 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 CRCPO75575 148 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 HGFP14210 728 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 ATP5F1P24539 256 aaPredicted RBP12.41□□□□□ -0.42
HSPG2-211ENST00000486901 EIF2B2P49770 351 aaKnown RBP12.41□□□□□ -0.42
HSPG2-211ENST00000486901 PKN3Q6P5Z2 889 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 MAMDC4Q6UXC1 1216 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 CYHR1Q6ZMK1 362 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 PAQR9Q6ZVX9 377 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 MTMR14Q8NCE2 650 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 DDHD1Q8NEL9 900 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 TMEM40Q8WWA1 233 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 TEKT5Q96M29 485 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 MUS81Q96NY9 551 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 SMIM14Q96QK8 99 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 ING2Q9H160 280 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 EIF2B3Q9NR50 452 aaKnown RBP12.41□□□□□ -0.42
HSPG2-211ENST00000486901 CMTM6Q9NX76 183 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 MARCH4Q9P2E8 410 aaPredicted RBP12.41□□□□□ -0.42
HSPG2-211ENST00000486901 SLC8A2Q9UPR5 921 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 FAM50BQ9Y247 325 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 U3KQV3 271 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 TRIM24O15164 1050 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 IPO13O94829 963 aaKnown RBP12.41□□□□□ -0.42
HSPG2-211ENST00000486901 TGFB3P10600 412 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 NPR3P17342 541 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 PGFP49763 221 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 NUP107P57740 925 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 SNX16P57768 344 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 SH3BP2P78314 561 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 LAPTM4AQ15012 233 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 SAMD4BQ5PRF9 694 aaKnown RBP12.41□□□□□ -0.42
HSPG2-211ENST00000486901 SDHAF4Q5VUM1 108 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 NAPEPLDQ6IQ20 393 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 SLC15A3Q8IY34 581 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 ABI1Q8IZP0 508 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 LZTR1Q8N653 840 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 ARRDC4Q8NCT1 418 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 FAIMQ9NVQ4 179 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 PLK2Q9NYY3 685 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 IL10P22301 178 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 FASP25445 335 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 PRDX3P30048 256 aaKnown RBP12.41□□□□□ -0.42
HSPG2-211ENST00000486901 ARSDP51689 593 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 CDKN2DP55273 166 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 NRG1Q02297 640 aaPredicted RBP12.41□□□□□ -0.42
HSPG2-211ENST00000486901 TTLL4Q14679 1199 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 TIGD2Q4W5G0 525 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 PRAMEF19Q5SWL8 479 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 KCTD11Q693B1 232 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 TMEM207Q6UWW9 146 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 PLPPR4Q7Z2D5 763 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 PTGR2Q8N8N7 351 aaPredicted RBP12.41□□□□□ -0.42
HSPG2-211ENST00000486901 ZBTB8BQ8NAP8 495 aaPredicted RBP12.41□□□□□ -0.42
HSPG2-211ENST00000486901 TANKQ92844 425 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 LPPQ93052 612 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 PAAF1Q9BRP4 392 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 GPATCH1Q9BRR8 931 aaKnown RBP12.41□□□□□ -0.42
HSPG2-211ENST00000486901 COLEC11Q9BWP8 271 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 SUCOQ9UBS9 1254 aaKnown RBP12.41□□□□□ -0.42
HSPG2-211ENST00000486901 ZNF232Q9UNY5 417 aa12.41□□□□□ -0.42
HSPG2-211ENST00000486901 UBA6A0AVT1 1052 aaPredicted RBP12.4□□□□□ -0.42
HSPG2-211ENST00000486901 ADAM23O75077 832 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 HSPA8P11142 646 aaKnown RBP12.4□□□□□ -0.42
HSPG2-211ENST00000486901 GFAPP14136 432 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 PSMA4P25789 261 aaKnown RBP12.4□□□□□ -0.42
HSPG2-211ENST00000486901 DNASE1L3Q13609 305 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 NFYCQ13952 458 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 DPP9Q86TI2 863 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 DNAJB3Q8WWF6 145 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 C19orf60Q96EN9 201 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 CDK15Q96Q40 435 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 MIR1-1HGQ9H1L0 117 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 VRTNQ9H8Y1 702 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 WDR6Q9NNW5 1121 aaKnown RBP12.4□□□□□ -0.42
HSPG2-211ENST00000486901 MID2Q9UJV3 735 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 RAD54BQ9Y620 910 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 KNL1Q8NG31 2342 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 FUOMA2VDF0 154 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 TMEM247A6NEH6 219 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 NFKBIEO00221 500 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 ENPP3O14638 875 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 ARPC2O15144 300 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 AXIN1O15169 862 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 PRKACGP22612 351 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 FSHRP23945 695 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 EDNRBP24530 442 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 RELAQ04206 551 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 GRIK4Q16099 956 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 ZBED5Q49AG3 693 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 ERMP1Q7Z2K6 904 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 EXOC8Q8IYI6 725 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 CLEC4FQ8N1N0 589 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 ATPAF2Q8N5M1 289 aa12.4□□□□□ -0.42
HSPG2-211ENST00000486901 PPHLN1Q8NEY8 458 aaKnown RBP12.4□□□□□ -0.42
HSPG2-211ENST00000486901 TBC1D15Q8TC07 691 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms