RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 GPR21Q99679 349 aa13.27□□□□□ -0.28
HMGN1-216ENST00000486741 CFAP97Q9P2B7 532 aa13.27□□□□□ -0.28
HMGN1-216ENST00000486741 HCSTQ9UBK5 93 aa13.27□□□□□ -0.28
HMGN1-216ENST00000486741 TLR6Q9Y2C9 796 aa13.27□□□□□ -0.28
HMGN1-216ENST00000486741 NDUFAF1Q9Y375 327 aa13.27□□□□□ -0.28
HMGN1-216ENST00000486741 POLR2AP24928 1970 aaKnown RBP13.27□□□□□ -0.28
HMGN1-216ENST00000486741 PHIPQ8WWQ0 1821 aa13.27□□□□□ -0.29
HMGN1-216ENST00000486741 ANKRD12Q6UB98 2062 aa13.27□□□□□ -0.29
HMGN1-216ENST00000486741 ZNF197O14709 1029 aa13.27□□□□□ -0.29
HMGN1-216ENST00000486741 GCAP28676 217 aa13.27□□□□□ -0.29
HMGN1-216ENST00000486741 EEF1DP29692 281 aaKnown RBP13.27□□□□□ -0.29
HMGN1-216ENST00000486741 HALP42357 657 aa13.27□□□□□ -0.29
HMGN1-216ENST00000486741 ATP6AP1LQ52LC2 224 aa13.27□□□□□ -0.29
HMGN1-216ENST00000486741 PAQR9Q6ZVX9 377 aa13.27□□□□□ -0.29
HMGN1-216ENST00000486741 MILR1Q7Z6M3 343 aa13.27□□□□□ -0.29
HMGN1-216ENST00000486741 PIM3Q86V86 326 aa13.27□□□□□ -0.29
HMGN1-216ENST00000486741 LINGO1Q96FE5 620 aa13.27□□□□□ -0.29
HMGN1-216ENST00000486741 SIKE1Q9BRV8 207 aa13.27□□□□□ -0.29
HMGN1-216ENST00000486741 WARS2Q9UGM6 360 aaKnown RBP13.27□□□□□ -0.29
HMGN1-216ENST00000486741 A0A1W2PQ45 241 aaPredicted RBP13.27□□□□□ -0.29
HMGN1-216ENST00000486741 A0A1W2PQY0 241 aa13.27□□□□□ -0.29
HMGN1-216ENST00000486741 ARVCFO00192 962 aa13.27□□□□□ -0.29
HMGN1-216ENST00000486741 SNAP91O60641 907 aa13.27□□□□□ -0.29
HMGN1-216ENST00000486741 MZF1P28698 734 aaPredicted RBP13.27□□□□□ -0.29
HMGN1-216ENST00000486741 PARP15Q460N3 678 aa13.27□□□□□ -0.29
HMGN1-216ENST00000486741 LPCAT4Q643R3 524 aa13.27□□□□□ -0.29
HMGN1-216ENST00000486741 OR52B2Q96RD2 323 aa13.27□□□□□ -0.29
HMGN1-216ENST00000486741 RUBCNLQ9H714 662 aa13.27□□□□□ -0.29
HMGN1-216ENST00000486741 A0A0D9SEW6 157 aa13.26□□□□□ -0.29
HMGN1-216ENST00000486741 CLDN11O75508 207 aa13.26□□□□□ -0.29
HMGN1-216ENST00000486741 IPO13O94829 963 aaKnown RBP13.26□□□□□ -0.29
HMGN1-216ENST00000486741 NDST3O95803 873 aa13.26□□□□□ -0.29
HMGN1-216ENST00000486741 ANPEPP15144 967 aa13.26□□□□□ -0.29
HMGN1-216ENST00000486741 PABPC1LQ4VXU2 614 aaKnown RBP13.26□□□□□ -0.29
HMGN1-216ENST00000486741 MS4A13Q5J8X5 152 aa13.26□□□□□ -0.29
HMGN1-216ENST00000486741 PPM1LQ5SGD2 360 aa13.26□□□□□ -0.29
HMGN1-216ENST00000486741 ZC3HC1Q86WB0 502 aaKnown RBP13.26□□□□□ -0.29
HMGN1-216ENST00000486741 FUBP3Q96I24 572 aaKnown RBP eCLIP13.26□□□□□ -0.29
HMGN1-216ENST00000486741 ZNF184Q99676 751 aaPredicted RBP13.26□□□□□ -0.29
HMGN1-216ENST00000486741 SMOC2Q9H3U7 446 aa13.26□□□□□ -0.29
HMGN1-216ENST00000486741 SBF2Q86WG5 1849 aa13.26□□□□□ -0.29
HMGN1-216ENST00000486741 TMEM114B3SHH9 223 aa13.26□□□□□ -0.29
HMGN1-216ENST00000486741 UBXN8O00124 270 aa13.26□□□□□ -0.29
HMGN1-216ENST00000486741 SIX3O95343 332 aaPredicted RBP13.26□□□□□ -0.29
HMGN1-216ENST00000486741 CXCL14O95715 111 aa13.26□□□□□ -0.29
HMGN1-216ENST00000486741 IGSF6O95976 241 aa13.26□□□□□ -0.29
HMGN1-216ENST00000486741 SLC10A3P09131 477 aa13.26□□□□□ -0.29
HMGN1-216ENST00000486741 PRKAA2P54646 552 aa13.26□□□□□ -0.29
HMGN1-216ENST00000486741 YBEYP58557 167 aaPredicted RBP13.26□□□□□ -0.29
HMGN1-216ENST00000486741 USP46P62068 366 aa13.26□□□□□ -0.29
HMGN1-216ENST00000486741 PFKPQ01813 784 aa13.26□□□□□ -0.29
HMGN1-216ENST00000486741 RALGDSQ12967 914 aa13.26□□□□□ -0.29
HMGN1-216ENST00000486741 ACSBG2Q5FVE4 666 aa13.26□□□□□ -0.29
HMGN1-216ENST00000486741 ADNPQ9H2P0 1102 aa13.26□□□□□ -0.29
HMGN1-216ENST00000486741 ZFP14Q9HCL3 533 aa13.26□□□□□ -0.29
HMGN1-216ENST00000486741 NKX1-2Q9UD57 310 aaPredicted RBP13.26□□□□□ -0.29
HMGN1-216ENST00000486741 FKBPLQ9UIM3 349 aa13.26□□□□□ -0.29
HMGN1-216ENST00000486741 CCDC162PA2VCL2 907 aa13.26□□□□□ -0.29
HMGN1-216ENST00000486741 SMNDC1O75940 238 aaKnown RBP eCLIP13.26□□□□□ -0.294e-7■■■■□ 21.6
HMGN1-216ENST00000486741 CYBAP13498 195 aa13.26□□□□□ -0.29
HMGN1-216ENST00000486741 DPYSQ14117 519 aa13.26□□□□□ -0.29
HMGN1-216ENST00000486741 TXNDC8Q6A555 127 aa13.26□□□□□ -0.29
HMGN1-216ENST00000486741 KHSRPQ92945 711 aaKnown RBP eCLIP13.26□□□□□ -0.291e-7■■□□□ 13.3
HMGN1-216ENST00000486741 SPATA16Q9BXB7 569 aa13.26□□□□□ -0.29
HMGN1-216ENST00000486741 KLQ9UEF7 1012 aa13.26□□□□□ -0.29
HMGN1-216ENST00000486741 EGFL7Q9UHF1 273 aa13.26□□□□□ -0.29
HMGN1-216ENST00000486741 CPQQ9Y646 472 aa13.26□□□□□ -0.29
HMGN1-216ENST00000486741 NPEPPSL1A6NEC2 478 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 MYO1GB0I1T2 1018 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 ZBTB14O43829 449 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 LZTS3O60299 673 aaPredicted RBP13.25□□□□□ -0.29
HMGN1-216ENST00000486741 MYO1DO94832 1006 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 FOPNLQ96NB1 174 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 NMRK1Q9NWW6 199 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 CIDEBQ9UHD4 219 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 SORCS3Q9UPU3 1222 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 SSC5DA1L4H1 1573 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 MCM3APO60318 1980 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 FKBP9O95302 570 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 DLDP09622 509 aaKnown RBP13.25□□□□□ -0.29
HMGN1-216ENST00000486741 HCAR3P49019 387 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 PSME3P61289 254 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 CYP4F8P98187 520 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 PGS1Q32NB8 556 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 PKDCCQ504Y2 493 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 OTUD3Q5T2D3 398 aaPredicted RBP13.25□□□□□ -0.29
HMGN1-216ENST00000486741 ZYG11AQ6WRX3 759 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 FKBP9P1Q75LS8 142 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 PHTF2Q8N3S3 785 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 TRPV1Q8NER1 839 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 OR56A4Q8NGH8 313 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 OXCT2Q9BYC2 517 aaPredicted RBP13.25□□□□□ -0.29
HMGN1-216ENST00000486741 ELOVL6Q9H5J4 265 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 MTMR11A4FU01 709 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 ZNF623O75123 536 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 RPP40O75818 363 aaKnown RBP13.25□□□□□ -0.29
HMGN1-216ENST00000486741 ZNF23P17027 643 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 PAX3P23760 479 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 SERPINA4P29622 427 aa13.25□□□□□ -0.29
HMGN1-216ENST00000486741 MSLNQ13421 630 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms