RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 ARRDC2Q8TBH0 407 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 FBXO25Q8TCJ0 367 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 CXorf40AQ8TE69 158 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 FRS2Q8WU20 508 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 HMGB4Q8WW32 186 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 CDKL2Q92772 493 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 ART4Q93070 314 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.99□□□□□ -1.292e-7■■■■■ 62.8
UBR4-214ENST00000486515 ERLEC1Q96DZ1 483 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 OXNAD1Q96HP4 312 aaPredicted RBP6.99□□□□□ -1.29
UBR4-214ENST00000486515 MRGPRX2Q96LB1 330 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 RUFY1Q96T51 708 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 ACOX2Q99424 681 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 APOL2Q9BQE5 337 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 C1QTNF7Q9BXJ2 289 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 PARD6BQ9BYG5 372 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 FOXQ1Q9C009 403 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 PHACTR1Q9C0D0 580 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 RSPH9Q9H1X1 276 aaPredicted RBP6.99□□□□□ -1.29
UBR4-214ENST00000486515 SAYSD1Q9NPB0 183 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 ZDHHC4Q9NPG8 344 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 PPANQ9NQ55 473 aaKnown RBP6.99□□□□□ -1.29
UBR4-214ENST00000486515 GDF3Q9NR23 364 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 SPATA6Q9NWH7 488 aaPredicted RBP6.99□□□□□ -1.29
UBR4-214ENST00000486515 KCTD5Q9NXV2 234 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.99□□□□□ -1.29
UBR4-214ENST00000486515 TXNDC16Q9P2K2 825 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 DKK3Q9UBP4 350 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 DMGDHQ9UI17 866 aaKnown RBP6.99□□□□□ -1.29
UBR4-214ENST00000486515 NFU1Q9UMS0 254 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 IKBKGQ9Y6K9 419 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 FAM169AQ9Y6X4 670 aa6.99□□□□□ -1.29
UBR4-214ENST00000486515 TEX15Q9BXT5 2789 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 KIF26AQ9ULI4 1882 aaPredicted RBP6.98□□□□□ -1.29
UBR4-214ENST00000486515 C1orf232A0A0U1RR37 186 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 LOC285095A0A1B0GVY8 99 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 FAM47DPA6NHR8 397 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 LRRC72A6NJI9 287 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 C16orf96A6NNT2 1141 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 ANKRD66B4E2M5 251 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 STX7O15400 261 aaKnown RBP6.98□□□□□ -1.29
UBR4-214ENST00000486515 HTRA2O43464 458 aaPredicted RBP6.98□□□□□ -1.29
UBR4-214ENST00000486515 LZTS3O60299 673 aaPredicted RBP6.98□□□□□ -1.29
UBR4-214ENST00000486515 SPAG6O75602 509 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 PCDH8O95206 1070 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 ELFN1P0C7U0 828 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 ZNF30P17039 623 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 PGAM1P18669 254 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 ADRA1DP25100 572 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 TNFRSF8P28908 595 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 OXTRP30559 389 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 GKP32189 559 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 ABL2P42684 1182 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 MAGEA6P43360 314 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 RGRP47804 291 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 CARSP49589 748 aaKnown RBP6.98□□□□□ -1.29
UBR4-214ENST00000486515 PRAMEP78395 509 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 C19orf57Q0VDD7 668 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 MESP2Q0VG99 397 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 TRAF2Q12933 501 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 SGCGQ13326 291 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 THOC5Q13769 683 aaKnown RBP6.98□□□□□ -1.29
UBR4-214ENST00000486515 ENPP2Q13822 863 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 POU6F1Q14863 301 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 BRD3Q15059 726 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 UGP2Q16851 508 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 USP39Q53GS9 565 aaKnown RBP6.98□□□□□ -1.29
UBR4-214ENST00000486515 SIRPB2Q5JXA9 342 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 ANO7Q6IWH7 933 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 EMBQ6PCB8 327 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 KDELC1Q6UW63 502 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 RANBP10Q6VN20 620 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 CCNI2Q6ZMN8 369 aaPredicted RBP6.98□□□□□ -1.29
UBR4-214ENST00000486515 PDZD3Q86UT5 571 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 CACUL1Q86Y37 369 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 SFTPA1Q8IWL2 248 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 HDDC3Q8N4P3 179 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 CAMKK1Q8N5S9 505 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 OR14C36Q8NHC7 312 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 BRSK1Q8TDC3 778 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 PTCD2Q8WV60 388 aaKnown RBP6.98□□□□□ -1.29
UBR4-214ENST00000486515 ZCCHC14Q8WYQ9 949 aaKnown RBP6.98□□□□□ -1.29
UBR4-214ENST00000486515 STAMBPL1Q96FJ0 436 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 SERPINB12Q96P63 405 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 BBC3Q96PG8 261 aaPredicted RBP6.98□□□□□ -1.29
UBR4-214ENST00000486515 HDAC8Q9BY41 377 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 BTBD1Q9H0C5 482 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 CHRDQ9H2X0 955 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 ACBD3Q9H3P7 528 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 ANKZF1Q9H8Y5 726 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 VPS37BQ9H9H4 285 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 ZFYVE1Q9HBF4 777 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 MAGEE1Q9HCI5 957 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 ARFGAP3Q9NP61 516 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 CASS4Q9NQ75 786 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 FBXL12Q9NXK8 326 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 PKD2L2Q9NZM6 624 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 ZC3H7BQ9UGR2 993 aaKnown RBP6.98□□□□□ -1.29
UBR4-214ENST00000486515 PPM1HQ9ULR3 514 aa6.98□□□□□ -1.29
UBR4-214ENST00000486515 FZD4Q9ULV1 537 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms