RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 ZSCAN12O43309 604 aa12.99□□□□□ -0.33
SSR4-211ENST00000486204 FZD6O60353 706 aa12.99□□□□□ -0.33
SSR4-211ENST00000486204 TJP3O95049 919 aa12.99□□□□□ -0.33
SSR4-211ENST00000486204 PTPN3P26045 913 aa12.99□□□□□ -0.33
SSR4-211ENST00000486204 CD27P26842 260 aa12.99□□□□□ -0.33
SSR4-211ENST00000486204 SUOXP51687 545 aa12.99□□□□□ -0.33
SSR4-211ENST00000486204 SEMG2Q02383 582 aa12.99□□□□□ -0.33
SSR4-211ENST00000486204 CCDC15Q0P6D6 951 aa12.99□□□□□ -0.33
SSR4-211ENST00000486204 FGL2Q14314 439 aa12.99□□□□□ -0.33
SSR4-211ENST00000486204 SUZ12Q15022 739 aaKnown RBP12.99□□□□□ -0.33
SSR4-211ENST00000486204 RPS6KA1Q15418 735 aa12.99□□□□□ -0.33
SSR4-211ENST00000486204 UGP2Q16851 508 aa12.99□□□□□ -0.33
SSR4-211ENST00000486204 ZNF284Q2VY69 593 aa12.99□□□□□ -0.33
SSR4-211ENST00000486204 HLA-BQ31612 363 aa12.99□□□□□ -0.33
SSR4-211ENST00000486204 TAF1BQ53T94 588 aaPredicted RBP12.99□□□□□ -0.33
SSR4-211ENST00000486204 SLC45A4Q5BKX6 768 aa12.99□□□□□ -0.33
SSR4-211ENST00000486204 SEL1L3Q68CR1 1132 aa12.99□□□□□ -0.33
SSR4-211ENST00000486204 BRAT1Q6PJG6 821 aa12.99□□□□□ -0.33
SSR4-211ENST00000486204 HORMAD1Q86X24 394 aa12.99□□□□□ -0.33
SSR4-211ENST00000486204 SNX19Q92543 992 aa12.99□□□□□ -0.33
SSR4-211ENST00000486204 NXPE2Q96DL1 559 aa12.99□□□□□ -0.33
SSR4-211ENST00000486204 FAM118BQ9BPY3 351 aa12.99□□□□□ -0.33
SSR4-211ENST00000486204 TM9SF3Q9HD45 589 aa12.99□□□□□ -0.33
SSR4-211ENST00000486204 TPX2Q9ULW0 747 aaKnown RBP12.99□□□□□ -0.33
SSR4-211ENST00000486204 FNDC3AQ9Y2H6 1198 aaKnown RBP12.99□□□□□ -0.33
SSR4-211ENST00000486204 R3HDM2Q9Y2K5 976 aaKnown RBP12.99□□□□□ -0.33
SSR4-211ENST00000486204 RIOK3O14730 519 aaKnown RBP12.98□□□□□ -0.33
SSR4-211ENST00000486204 BCAT2O15382 392 aaPredicted RBP12.98□□□□□ -0.33
SSR4-211ENST00000486204 TNFSF14O43557 240 aa12.98□□□□□ -0.33
SSR4-211ENST00000486204 TSPAN6O43657 245 aa12.98□□□□□ -0.33
SSR4-211ENST00000486204 PRKCGP05129 697 aa12.98□□□□□ -0.33
SSR4-211ENST00000486204 MAT2AP31153 395 aaKnown RBP12.98□□□□□ -0.33
SSR4-211ENST00000486204 MMP12P39900 470 aa12.98□□□□□ -0.33
SSR4-211ENST00000486204 CETN2P41208 172 aa12.98□□□□□ -0.33
SSR4-211ENST00000486204 RALGDSQ12967 914 aa12.98□□□□□ -0.33
SSR4-211ENST00000486204 TEX44Q53QW1 395 aa12.98□□□□□ -0.33
SSR4-211ENST00000486204 KIAA1161Q6NSJ0 714 aa12.98□□□□□ -0.33
SSR4-211ENST00000486204 DHRS13Q6UX07 377 aa12.98□□□□□ -0.33
SSR4-211ENST00000486204 TTC7BQ86TV6 843 aa12.98□□□□□ -0.33
SSR4-211ENST00000486204 FAM181AQ8N9Y4 354 aa12.98□□□□□ -0.33
SSR4-211ENST00000486204 HTR3CQ8WXA8 447 aa12.98□□□□□ -0.33
SSR4-211ENST00000486204 TADA1Q96BN2 335 aa12.98□□□□□ -0.33
SSR4-211ENST00000486204 IMP4Q96G21 291 aaKnown RBP12.98□□□□□ -0.33
SSR4-211ENST00000486204 TEKT5Q96M29 485 aa12.98□□□□□ -0.33
SSR4-211ENST00000486204 SLC6A18Q96N87 628 aa12.98□□□□□ -0.33
SSR4-211ENST00000486204 AGAP3Q96P47 875 aa12.98□□□□□ -0.33
SSR4-211ENST00000486204 TDRD1Q9BXT4 1180 aaKnown RBP12.98□□□□□ -0.33
SSR4-211ENST00000486204 MIR1-1HGQ9H1L0 117 aa12.98□□□□□ -0.33
SSR4-211ENST00000486204 C10orf88Q9H8K7 445 aa12.98□□□□□ -0.33
SSR4-211ENST00000486204 PCDH12Q9NPG4 1184 aa12.98□□□□□ -0.33
SSR4-211ENST00000486204 TRMT1Q9NXH9 659 aaKnown RBP12.98□□□□□ -0.33
SSR4-211ENST00000486204 BTBD3Q9Y2F9 522 aa12.98□□□□□ -0.33
SSR4-211ENST00000486204 TTLL3Q9Y4R7 772 aa12.98□□□□□ -0.33
SSR4-211ENST00000486204 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.98□□□□□ -0.336e-9■□□□□ 9.1
SSR4-211ENST00000486204 ARID1BQ8NFD5 2236 aaPredicted RBP12.97□□□□□ -0.33
SSR4-211ENST00000486204 A0A1W2PR77 199 aa12.97□□□□□ -0.33
SSR4-211ENST00000486204 ERVH48-1M5A8F1 160 aa12.97□□□□□ -0.33
SSR4-211ENST00000486204 MTSS1O43312 755 aa12.97□□□□□ -0.33
SSR4-211ENST00000486204 PCDH8O95206 1070 aa12.97□□□□□ -0.33
SSR4-211ENST00000486204 PGLSO95336 258 aa12.97□□□□□ -0.33
SSR4-211ENST00000486204 WISP1O95388 367 aa12.97□□□□□ -0.33
SSR4-211ENST00000486204 CPP00450 1065 aa12.97□□□□□ -0.33
SSR4-211ENST00000486204 PRLP01236 227 aa12.97□□□□□ -0.33
SSR4-211ENST00000486204 PDHA1P08559 390 aa12.97□□□□□ -0.33
SSR4-211ENST00000486204 RBP3P10745 1247 aa12.97□□□□□ -0.33
SSR4-211ENST00000486204 PRLRP16471 622 aa12.97□□□□□ -0.33
SSR4-211ENST00000486204 RBL1P28749 1068 aa12.97□□□□□ -0.33
SSR4-211ENST00000486204 CD68P34810 354 aaPredicted RBP12.97□□□□□ -0.33
SSR4-211ENST00000486204 EIF3EP60228 445 aaKnown RBP12.97□□□□□ -0.33
SSR4-211ENST00000486204 SKOR1P84550 965 aa12.97□□□□□ -0.33
SSR4-211ENST00000486204 BNC1Q01954 994 aa12.97□□□□□ -0.33
SSR4-211ENST00000486204 SRSF1Q07955 248 aaKnown RBP eCLIP12.97□□□□□ -0.33
SSR4-211ENST00000486204 ITKQ08881 620 aa12.97□□□□□ -0.33
SSR4-211ENST00000486204 ELP6Q0PNE2 266 aa12.97□□□□□ -0.33
SSR4-211ENST00000486204 SIX1Q15475 284 aaPredicted RBP12.97□□□□□ -0.33
SSR4-211ENST00000486204 TMEM52BQ4KMG9 183 aa12.97□□□□□ -0.33
SSR4-211ENST00000486204 SEL1L2Q5TEA6 688 aa12.97□□□□□ -0.33
SSR4-211ENST00000486204 CCDC181Q5TID7 509 aa12.97□□□□□ -0.33
SSR4-211ENST00000486204 NAPEPLDQ6IQ20 393 aa12.97□□□□□ -0.33
SSR4-211ENST00000486204 LAYNQ6UX15 382 aa12.97□□□□□ -0.33
SSR4-211ENST00000486204 PRPF39Q86UA1 669 aaKnown RBP12.97□□□□□ -0.33
SSR4-211ENST00000486204 TMPRSS12Q86WS5 348 aa12.97□□□□□ -0.33
SSR4-211ENST00000486204 SLC13A5Q86YT5 568 aaPredicted RBP12.97□□□□□ -0.33
SSR4-211ENST00000486204 ZNF567Q8N184 647 aa12.97□□□□□ -0.33
SSR4-211ENST00000486204 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.97□□□□□ -0.33
SSR4-211ENST00000486204 TMEM145Q8NBT3 493 aa12.97□□□□□ -0.33
SSR4-211ENST00000486204 SLC35B2Q8TB61 432 aa12.97□□□□□ -0.33
SSR4-211ENST00000486204 PIH1D2Q8WWB5 315 aa12.97□□□□□ -0.33
SSR4-211ENST00000486204 KLK6Q92876 244 aa12.97□□□□□ -0.33
SSR4-211ENST00000486204 KLF6Q99612 283 aaPredicted RBP12.97□□□□□ -0.33
SSR4-211ENST00000486204 C1QTNF2Q9BXJ5 285 aa12.97□□□□□ -0.33
SSR4-211ENST00000486204 GLOD4Q9HC38 313 aa12.97□□□□□ -0.33
SSR4-211ENST00000486204 SEPT10Q9P0V9 454 aa12.97□□□□□ -0.33
SSR4-211ENST00000486204 DMTF1Q9Y222 760 aa12.97□□□□□ -0.33
SSR4-211ENST00000486204 AK5Q9Y6K8 562 aa12.97□□□□□ -0.33
SSR4-211ENST00000486204 CFAP46Q8IYW2 2715 aa12.97□□□□□ -0.33
SSR4-211ENST00000486204 A0A1W2PQ67 120 aa12.96□□□□□ -0.33
SSR4-211ENST00000486204 B8ZZF3 427 aa12.96□□□□□ -0.33
SSR4-211ENST00000486204 H7C0C1 242 aa12.96□□□□□ -0.33
SSR4-211ENST00000486204 KCNK3O14649 394 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms