RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 PIAS2O75928 621 aa12.54□□□□□ -0.4
PTCD1-205ENST00000485746 HEXIM1O94992 359 aaKnown RBP12.54□□□□□ -0.4
PTCD1-205ENST00000485746 CSF2P04141 144 aa12.54□□□□□ -0.4
PTCD1-205ENST00000485746 PDHA1P08559 390 aa12.54□□□□□ -0.4
PTCD1-205ENST00000485746 ALPIP09923 528 aa12.54□□□□□ -0.4
PTCD1-205ENST00000485746 PECAM1P16284 738 aaPredicted RBP12.54□□□□□ -0.4
PTCD1-205ENST00000485746 SPINK2P20155 84 aa12.54□□□□□ -0.4
PTCD1-205ENST00000485746 HNF1BP35680 557 aa12.54□□□□□ -0.4
PTCD1-205ENST00000485746 PEX5P50542 639 aa12.54□□□□□ -0.4
PTCD1-205ENST00000485746 BLKP51451 505 aa12.54□□□□□ -0.4
PTCD1-205ENST00000485746 DAB2P98082 770 aa12.54□□□□□ -0.4
PTCD1-205ENST00000485746 PPARDQ03181 441 aa12.54□□□□□ -0.4
PTCD1-205ENST00000485746 CNGA3Q16281 694 aa12.54□□□□□ -0.4
PTCD1-205ENST00000485746 PCSK7Q16549 785 aa12.54□□□□□ -0.4
PTCD1-205ENST00000485746 TAZQ16635 292 aa12.54□□□□□ -0.4
PTCD1-205ENST00000485746 ALG1LQ6GMV1 187 aa12.54□□□□□ -0.4
PTCD1-205ENST00000485746 MACC1Q6ZN28 852 aa12.54□□□□□ -0.4
PTCD1-205ENST00000485746 KDELC2Q7Z4H8 507 aa12.54□□□□□ -0.4
PTCD1-205ENST00000485746 SLCO6A1Q86UG4 719 aa12.54□□□□□ -0.4
PTCD1-205ENST00000485746 HID1Q8IV36 788 aa12.54□□□□□ -0.4
PTCD1-205ENST00000485746 CCDC112Q8NEF3 446 aa12.54□□□□□ -0.4
PTCD1-205ENST00000485746 BAHD1Q8TBE0 780 aaPredicted RBP12.54□□□□□ -0.4
PTCD1-205ENST00000485746 ARRDC2Q8TBH0 407 aa12.54□□□□□ -0.4
PTCD1-205ENST00000485746 PIH1D2Q8WWB5 315 aa12.54□□□□□ -0.4
PTCD1-205ENST00000485746 SCRN2Q96FV2 425 aa12.54□□□□□ -0.4
PTCD1-205ENST00000485746 OLFM3Q96PB7 478 aa12.54□□□□□ -0.4
PTCD1-205ENST00000485746 RBM15Q96T37 977 aaKnown RBP eCLIP12.54□□□□□ -0.4
PTCD1-205ENST00000485746 ADGRE3Q9BY15 652 aa12.54□□□□□ -0.4
PTCD1-205ENST00000485746 EVA1BQ9NVM1 165 aa12.54□□□□□ -0.4
PTCD1-205ENST00000485746 UCKL1Q9NWZ5 548 aa12.54□□□□□ -0.4
PTCD1-205ENST00000485746 SPASTQ9UBP0 616 aa12.54□□□□□ -0.4
PTCD1-205ENST00000485746 TRIM10Q9UDY6 481 aa12.54□□□□□ -0.4
PTCD1-205ENST00000485746 KLQ9UEF7 1012 aa12.54□□□□□ -0.4
PTCD1-205ENST00000485746 APOBEC3BQ9UH17 382 aaKnown RBP12.54□□□□□ -0.4
PTCD1-205ENST00000485746 DNPEPQ9ULA0 475 aa12.54□□□□□ -0.4
PTCD1-205ENST00000485746 OR1A2Q9Y585 309 aa12.54□□□□□ -0.4
PTCD1-205ENST00000485746 GOLGA6L9A6NEM1 432 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 NPIPB15A6NHN6 443 aaPredicted RBP12.53□□□□□ -0.4
PTCD1-205ENST00000485746 HACD1B0YJ81 288 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 MTSS1O43312 755 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 AQP9O43315 295 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 SIGLEC6O43699 453 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 KRT86O43790 486 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 FTCDO95954 541 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 TOP3BO95985 862 aaKnown RBP12.53□□□□□ -0.4
PTCD1-205ENST00000485746 TNFP01375 233 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 NME1P15531 152 aaKnown RBP12.53□□□□□ -0.4
PTCD1-205ENST00000485746 KELP23276 732 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 ETV3P41162 512 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 RPL26P61254 145 aaKnown RBP12.53□□□□□ -0.4
PTCD1-205ENST00000485746 SKOR1P84550 965 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 EIF2B5Q13144 721 aaKnown RBP12.53□□□□□ -0.4
PTCD1-205ENST00000485746 DNAJC3Q13217 504 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 NFATC4Q14934 902 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 AGERQ15109 404 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 TEX44Q53QW1 395 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 PRRT3Q5FWE3 981 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 TPRG1LQ5T0D9 272 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 FAM182AQ5T1J6 154 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 PNCKQ6P2M8 343 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 PID1Q7Z2X4 250 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 TSPAN33Q86UF1 283 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 PHACTR4Q8IZ21 702 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 SLC25A45Q8N413 288 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 CNTD1Q8N815 330 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 PLA2G15Q8NCC3 412 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 TSACCQ96A04 125 aaPredicted RBP12.53□□□□□ -0.4
PTCD1-205ENST00000485746 COQ10AQ96MF6 247 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 WDR92Q96MX6 357 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 MLPHQ9BV36 600 aaPredicted RBP12.53□□□□□ -0.4
PTCD1-205ENST00000485746 DUSP23Q9BVJ7 150 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 SCNM1Q9BWG6 230 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 TDRD1Q9BXT4 1180 aaKnown RBP12.53□□□□□ -0.4
PTCD1-205ENST00000485746 OSBPL8Q9BZF1 889 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 SLC25A51Q9H1U9 297 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 GLOD4Q9HC38 313 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 GPR27Q9NS67 375 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 KLHL8Q9P2G9 620 aaPredicted RBP12.53□□□□□ -0.4
PTCD1-205ENST00000485746 GUCA1BQ9UMX6 200 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 RPL26L1Q9UNX3 145 aaKnown RBP12.53□□□□□ -0.4
PTCD1-205ENST00000485746 PPIL1Q9Y3C6 166 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 CEP250Q9BV73 2442 aa12.53□□□□□ -0.4
PTCD1-205ENST00000485746 LAMA1P25391 3075 aa12.52□□□□□ -0.4
PTCD1-205ENST00000485746 A0A0J9YYE9 177 aa12.52□□□□□ -0.41
PTCD1-205ENST00000485746 GOLGA6L3A6NEY3 463 aa12.52□□□□□ -0.41
PTCD1-205ENST00000485746 MIF4GDA9UHW6 222 aaKnown RBP12.52□□□□□ -0.41
PTCD1-205ENST00000485746 PSMD11O00231 422 aa12.52□□□□□ -0.41
PTCD1-205ENST00000485746 PDE2AO00408 941 aaPredicted RBP12.52□□□□□ -0.41
PTCD1-205ENST00000485746 SCAMP1O15126 338 aa12.52□□□□□ -0.41
PTCD1-205ENST00000485746 ARHGAP6O43182 974 aa12.52□□□□□ -0.41
PTCD1-205ENST00000485746 STK10O94804 968 aaKnown RBP12.52□□□□□ -0.41
PTCD1-205ENST00000485746 TJP3O95049 919 aa12.52□□□□□ -0.41
PTCD1-205ENST00000485746 RASGRP1O95267 797 aa12.52□□□□□ -0.41
PTCD1-205ENST00000485746 TRBC1P01850 177 aa12.52□□□□□ -0.41
PTCD1-205ENST00000485746 ANXA6P08133 673 aa12.52□□□□□ -0.41
PTCD1-205ENST00000485746 ZNF30P17039 623 aa12.52□□□□□ -0.41
PTCD1-205ENST00000485746 CKMT2P17540 419 aa12.52□□□□□ -0.41
PTCD1-205ENST00000485746 PTPN3P26045 913 aa12.52□□□□□ -0.41
PTCD1-205ENST00000485746 GPR1P46091 355 aa12.52□□□□□ -0.41
PTCD1-205ENST00000485746 DUSP3P51452 185 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms