RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 AGBL4Q5VU57 503 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 HLA-DQA1Q5Y7H0 255 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 RFWD3Q6PCD5 774 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 CYP2R1Q6VVX0 501 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 GCNT7Q6ZNI0 430 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 MMS22LQ6ZRQ5 1243 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 CLEC20AQ6ZU45 233 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 CCDC186Q7Z3E2 898 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 PARGQ86W56 976 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 MFN1Q8IWA4 741 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 RBFAQ8N0V3 343 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 KDM1BQ8NB78 822 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 APOBEC4Q8WW27 367 aaKnown RBP5.46□□□□□ -1.54
PTPN4-210ENST00000485247 C8orf76Q96K31 380 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 PTCHD1Q96NR3 888 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 CMKLR1Q99788 373 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 STRA6Q9BX79 667 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 CPEB1Q9BZB8 566 aaKnown RBP5.46□□□□□ -1.54
PTPN4-210ENST00000485247 SDCBP2Q9H190 292 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 BLOC1S4Q9NUP1 217 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 CLIC5Q9NZA1 410 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 SIRPGQ9P1W8 387 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 GULP1Q9UBP9 304 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 ERRFI1Q9UJM3 462 aaPredicted RBP5.46□□□□□ -1.54
PTPN4-210ENST00000485247 SARDHQ9UL12 918 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 SDK2Q58EX2 2172 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 ESPL1Q14674 2120 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 SPTY2D1-AS1A0A0U1RR47 76 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 POM121BA6NF01 834 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 A6NNZ2 444 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 TCP11X1B4DZS4 312 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 AURKAO14965 403 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 DUX1O43812 170 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 LDLRP01130 860 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 ANXA6P08133 673 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 SRPRAP08240 638 aaKnown RBP5.45□□□□□ -1.54
PTPN4-210ENST00000485247 NOP2P46087 812 aaKnown RBP5.45□□□□□ -1.54
PTPN4-210ENST00000485247 STK19P49842 368 aaPredicted RBP5.45□□□□□ -1.54
PTPN4-210ENST00000485247 CASP5P51878 434 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 NDST1P52848 882 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 ECT2LQ008S8 904 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 POU4F1Q01851 419 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 CDC20Q12834 499 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 PDE1CQ14123 709 aaPredicted RBP5.45□□□□□ -1.54
PTPN4-210ENST00000485247 BMT2Q1RMZ1 405 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 PLEKHN1Q494U1 663 aaPredicted RBP5.45□□□□□ -1.54
PTPN4-210ENST00000485247 FSCBQ5H9T9 825 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 PITRM1Q5JRX3 1037 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 PIK3R6Q5UE93 754 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 FAM46CQ5VWP2 391 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 RNF219Q5W0B1 726 aaPredicted RBP5.45□□□□□ -1.54
PTPN4-210ENST00000485247 SEL1L3Q68CR1 1132 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 ESRP1Q6NXG1 681 aaKnown RBP5.45□□□□□ -1.54
PTPN4-210ENST00000485247 TTLL10Q6ZVT0 673 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 ASB18Q6ZVZ8 466 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 TIPARPQ7Z3E1 657 aaKnown RBP5.45□□□□□ -1.54
PTPN4-210ENST00000485247 ABI3BPQ7Z7G0 1075 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 IGDCC3Q8IVU1 814 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 CARNMT1Q8N4J0 409 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 Q8N9G6 341 aaPredicted RBP5.45□□□□□ -1.54
PTPN4-210ENST00000485247 RASSF8Q8NHQ8 419 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 FIBINQ8TAL6 211 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 SYAP1Q96A49 352 aaPredicted RBP5.45□□□□□ -1.54
PTPN4-210ENST00000485247 FAM131CQ96AQ9 280 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 TMEM159Q96B96 161 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 CCDC127Q96BQ5 260 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 CALML4Q96GE6 196 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 SEC16BQ96JE7 1060 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 LMLNQ96KR4 655 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 SIGLEC10Q96LC7 697 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 BMFQ96LC9 184 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 SPAG5Q96R06 1193 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 UNKQ9C0B0 810 aaKnown RBP5.45□□□□□ -1.54
PTPN4-210ENST00000485247 XYLT2Q9H1B5 865 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 TCEAL2Q9H3H9 227 aaPredicted RBP5.45□□□□□ -1.54
PTPN4-210ENST00000485247 LRRN3Q9H3W5 708 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 SPASTQ9UBP0 616 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 CGGBP1Q9UFW8 167 aaPredicted RBP5.45□□□□□ -1.54
PTPN4-210ENST00000485247 HMGXB4Q9UGU5 601 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 SFMBT1Q9UHJ3 866 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 IPO11Q9UI26 975 aaKnown RBP5.45□□□□□ -1.54
PTPN4-210ENST00000485247 PLA2G2DQ9UNK4 145 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 RNF215Q9Y6U7 377 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 SCN8AQ9UQD0 1980 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 ITIH6Q6UXX5 1313 aa5.45□□□□□ -1.54
PTPN4-210ENST00000485247 ADGRG4Q8IZF6 3080 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 SPENQ96T58 3664 aaKnown RBP5.44□□□□□ -1.54
PTPN4-210ENST00000485247 YY2O15391 372 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 MSI1O43347 362 aaKnown RBP5.44□□□□□ -1.54
PTPN4-210ENST00000485247 HNRNPRO43390 633 aaKnown RBP5.44□□□□□ -1.54
PTPN4-210ENST00000485247 PCDH8O95206 1070 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 DBHP09172 617 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 INHBBP09529 407 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 CCL4P13236 92 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 ERCC5P28715 1186 aaPredicted RBP5.44□□□□□ -1.54
PTPN4-210ENST00000485247 OAS2P29728 719 aaKnown RBP5.44□□□□□ -1.54
PTPN4-210ENST00000485247 ATICP31939 592 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 UGT1A3P35503 534 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 UBA7P41226 1012 aa5.44□□□□□ -1.54
PTPN4-210ENST00000485247 YWHAGP61981 247 aaKnown RBP eCLIP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms