RNA–Protein interactions for RNA: ENST00000484412.1

HDLBP-240, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-240	ENST00000484412	SEL1L2	Q5TEA6	688 aa		14	□□□□□ -0.17
HDLBP-240	ENST00000484412	ANKRD20A1	Q5TYW2	823 aa		14	□□□□□ -0.17
HDLBP-240	ENST00000484412	ANKRD20A3	Q5VUR7	823 aa		14	□□□□□ -0.17
HDLBP-240	ENST00000484412	ITPRIPL1	Q6GPH6	555 aa		14	□□□□□ -0.17
HDLBP-240	ENST00000484412	CRTC1	Q6UUV9	634 aa		14	□□□□□ -0.17
HDLBP-240	ENST00000484412	KDELC1	Q6UW63	502 aa		14	□□□□□ -0.17
HDLBP-240	ENST00000484412	RANBP10	Q6VN20	620 aa		14	□□□□□ -0.17
HDLBP-240	ENST00000484412	GCNT7	Q6ZNI0	430 aa		14	□□□□□ -0.17
HDLBP-240	ENST00000484412	ZNF765	Q7L2R6	523 aa		14	□□□□□ -0.17
HDLBP-240	ENST00000484412	SPATS2	Q86XZ4	545 aa	Known RBP	14	□□□□□ -0.17
HDLBP-240	ENST00000484412	MINDY1	Q8N5J2	469 aa		14	□□□□□ -0.17
HDLBP-240	ENST00000484412	LRRN4	Q8WUT4	740 aa		14	□□□□□ -0.17
HDLBP-240	ENST00000484412	SNX19	Q92543	992 aa		14	□□□□□ -0.17
HDLBP-240	ENST00000484412	AGAP3	Q96P47	875 aa		14	□□□□□ -0.17
HDLBP-240	ENST00000484412	CDH19	Q9H159	772 aa		14	□□□□□ -0.17
HDLBP-240	ENST00000484412	GAREM1	Q9H706	876 aa		14	□□□□□ -0.17
HDLBP-240	ENST00000484412	GDF3	Q9NR23	364 aa		14	□□□□□ -0.17
HDLBP-240	ENST00000484412	AASDHPPT	Q9NRN7	309 aa		14	□□□□□ -0.17
HDLBP-240	ENST00000484412	B4GALT6	Q9UBX8	382 aa		14	□□□□□ -0.17
HDLBP-240	ENST00000484412	CHKB	Q9Y259	395 aa		14	□□□□□ -0.17
HDLBP-240	ENST00000484412	SNX11	Q9Y5W9	270 aa		14	□□□□□ -0.17
HDLBP-240	ENST00000484412	POM121B	A6NF01	834 aa		13.99	□□□□□ -0.17
HDLBP-240	ENST00000484412		H7C0C1	242 aa		13.99	□□□□□ -0.17
HDLBP-240	ENST00000484412	RAD51B	O15315	384 aa		13.99	□□□□□ -0.17
HDLBP-240	ENST00000484412	ANXA9	O76027	345 aa		13.99	□□□□□ -0.17
HDLBP-240	ENST00000484412	RECQL5	O94762	991 aa	Predicted RBP	13.99	□□□□□ -0.17
HDLBP-240	ENST00000484412	NDST3	O95803	873 aa		13.99	□□□□□ -0.17
HDLBP-240	ENST00000484412	PYGL	P06737	847 aa		13.99	□□□□□ -0.17
HDLBP-240	ENST00000484412	ITGAV	P06756	1048 aa		13.99	□□□□□ -0.17
HDLBP-240	ENST00000484412	CEACAM1	P13688	526 aa		13.99	□□□□□ -0.17
HDLBP-240	ENST00000484412	CD86	P42081	329 aa		13.99	□□□□□ -0.17
HDLBP-240	ENST00000484412	ATP5O	P48047	213 aa		13.99	□□□□□ -0.17
HDLBP-240	ENST00000484412	MTM1	Q13496	603 aa		13.99	□□□□□ -0.17
HDLBP-240	ENST00000484412	PTK2B	Q14289	1009 aa		13.99	□□□□□ -0.17
HDLBP-240	ENST00000484412	SIX1	Q15475	284 aa	Predicted RBP	13.99	□□□□□ -0.17
HDLBP-240	ENST00000484412	OASL	Q15646	514 aa	Known RBP	13.99	□□□□□ -0.17
HDLBP-240	ENST00000484412	QPCT	Q16769	361 aa		13.99	□□□□□ -0.17
HDLBP-240	ENST00000484412	RSPO4	Q2I0M5	234 aa	Predicted RBP	13.99	□□□□□ -0.17
HDLBP-240	ENST00000484412	CCDC181	Q5TID7	509 aa		13.99	□□□□□ -0.17
HDLBP-240	ENST00000484412	ESRP1	Q6NXG1	681 aa	Known RBP	13.99	□□□□□ -0.17
HDLBP-240	ENST00000484412	DARS2	Q6PI48	645 aa	Known RBP	13.99	□□□□□ -0.17
HDLBP-240	ENST00000484412		Q6ZSR6	202 aa		13.99	□□□□□ -0.17
HDLBP-240	ENST00000484412	TMC3	Q7Z5M5	1100 aa		13.99	□□□□□ -0.17
HDLBP-240	ENST00000484412	SDR16C5	Q8N3Y7	309 aa		13.99	□□□□□ -0.17
HDLBP-240	ENST00000484412	RMDN1	Q96DB5	314 aa		13.99	□□□□□ -0.17
HDLBP-240	ENST00000484412	SPATA13	Q96N96	652 aa		13.99	□□□□□ -0.17
HDLBP-240	ENST00000484412	TRABD	Q9H4I3	376 aa		13.99	□□□□□ -0.17
HDLBP-240	ENST00000484412	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	13.99	□□□□□ -0.17
HDLBP-240	ENST00000484412	ITM2B	Q9Y287	266 aa		13.99	□□□□□ -0.17
HDLBP-240	ENST00000484412	CAPN8	A6NHC0	703 aa		13.98	□□□□□ -0.17
HDLBP-240	ENST00000484412	KCNK3	O14649	394 aa		13.98	□□□□□ -0.17
HDLBP-240	ENST00000484412	TNFRSF10C	O14798	259 aa		13.98	□□□□□ -0.17
HDLBP-240	ENST00000484412	PSMD3	O43242	534 aa		13.98	□□□□□ -0.17
HDLBP-240	ENST00000484412	LIAS	O43766	372 aa		13.98	□□□□□ -0.17
HDLBP-240	ENST00000484412	PTMA	P06454	111 aa	Known RBP	13.98	□□□□□ -0.17
HDLBP-240	ENST00000484412	THEGL	P0DJG4	465 aa		13.98	□□□□□ -0.17
HDLBP-240	ENST00000484412	LHCGR	P22888	699 aa		13.98	□□□□□ -0.17
HDLBP-240	ENST00000484412	ID4	P47928	161 aa		13.98	□□□□□ -0.17
HDLBP-240	ENST00000484412	MSLN	Q13421	630 aa	Predicted RBP	13.98	□□□□□ -0.17
HDLBP-240	ENST00000484412	ARHGEF7	Q14155	803 aa		13.98	□□□□□ -0.17
HDLBP-240	ENST00000484412	SHB	Q15464	509 aa		13.98	□□□□□ -0.17
HDLBP-240	ENST00000484412	CNGA3	Q16281	694 aa		13.98	□□□□□ -0.17
HDLBP-240	ENST00000484412	P3H1	Q32P28	736 aa		13.98	□□□□□ -0.17
HDLBP-240	ENST00000484412	CCDC70	Q6NSX1	233 aa		13.98	□□□□□ -0.17
HDLBP-240	ENST00000484412	PNCK	Q6P2M8	343 aa		13.98	□□□□□ -0.17
HDLBP-240	ENST00000484412	C4orf22	Q6V702	233 aa		13.98	□□□□□ -0.17
HDLBP-240	ENST00000484412	KANSL1	Q7Z3B3	1105 aa		13.98	□□□□□ -0.17
HDLBP-240	ENST00000484412	ADAT2	Q7Z6V5	191 aa	Known RBP	13.98	□□□□□ -0.17
HDLBP-240	ENST00000484412	GLRX5	Q86SX6	157 aa		13.98	□□□□□ -0.17
HDLBP-240	ENST00000484412	MRGPRX2	Q96LB1	330 aa		13.98	□□□□□ -0.17
HDLBP-240	ENST00000484412	RBM15	Q96T37	977 aa	Known RBP eCLIP	13.98	□□□□□ -0.17
HDLBP-240	ENST00000484412	GBA3	Q9H227	469 aa		13.98	□□□□□ -0.17
HDLBP-240	ENST00000484412	MBNL1	Q9NR56	388 aa	Known RBP	13.98	□□□□□ -0.17
HDLBP-240	ENST00000484412	TM7SF3	Q9NS93	570 aa		13.98	□□□□□ -0.17
HDLBP-240	ENST00000484412	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	13.98	□□□□□ -0.17	1e-8	■□□□□ 9.2
HDLBP-240	ENST00000484412	FEZ2	Q9UHY8	353 aa	Predicted RBP	13.98	□□□□□ -0.17
HDLBP-240	ENST00000484412	CSNK1G3	Q9Y6M4	447 aa		13.98	□□□□□ -0.17
HDLBP-240	ENST00000484412	TCRBV7S2A1N4T	A0A589	114 aa		13.97	□□□□□ -0.17
HDLBP-240	ENST00000484412	NPIPB15	A6NHN6	443 aa	Predicted RBP	13.97	□□□□□ -0.17
HDLBP-240	ENST00000484412	PDE2A	O00408	941 aa	Predicted RBP	13.97	□□□□□ -0.17
HDLBP-240	ENST00000484412	KCNN4	O15554	427 aa		13.97	□□□□□ -0.17
HDLBP-240	ENST00000484412	KIF5C	O60282	957 aa		13.97	□□□□□ -0.17
HDLBP-240	ENST00000484412	LZTS3	O60299	673 aa	Predicted RBP	13.97	□□□□□ -0.17
HDLBP-240	ENST00000484412	STK10	O94804	968 aa	Known RBP	13.97	□□□□□ -0.17
HDLBP-240	ENST00000484412	MT-CYB	P00156	380 aa	Predicted RBP	13.97	□□□□□ -0.17
HDLBP-240	ENST00000484412	CSF2	P04141	144 aa		13.97	□□□□□ -0.17
HDLBP-240	ENST00000484412	ELFN1	P0C7U0	828 aa		13.97	□□□□□ -0.17
HDLBP-240	ENST00000484412	NFKB1	P19838	968 aa		13.97	□□□□□ -0.17
HDLBP-240	ENST00000484412	HLA-DPA1	P20036	260 aa		13.97	□□□□□ -0.17
HDLBP-240	ENST00000484412	ADRA1A	P35348	466 aa		13.97	□□□□□ -0.17
HDLBP-240	ENST00000484412	HMGCL	P35914	325 aa		13.97	□□□□□ -0.17
HDLBP-240	ENST00000484412	ARRB1	P49407	418 aa	Predicted RBP	13.97	□□□□□ -0.17
HDLBP-240	ENST00000484412	STC1	P52823	247 aa		13.97	□□□□□ -0.17
HDLBP-240	ENST00000484412	GEM	P55040	296 aa		13.97	□□□□□ -0.17
HDLBP-240	ENST00000484412	KCTD11	Q693B1	232 aa		13.97	□□□□□ -0.17
HDLBP-240	ENST00000484412	OR13H1	Q8NG92	308 aa		13.97	□□□□□ -0.17
HDLBP-240	ENST00000484412	SPATA22	Q8NHS9	363 aa		13.97	□□□□□ -0.17
HDLBP-240	ENST00000484412	ACTRT1	Q8TDG2	376 aa		13.97	□□□□□ -0.17
HDLBP-240	ENST00000484412	SAP25	Q8TEE9	199 aa		13.97	□□□□□ -0.17
HDLBP-240	ENST00000484412	PDCD6IP	Q8WUM4	868 aa	Known RBP	13.97	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms