RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 CCDC122Q5T0U0 273 aa9.46□□□□□ -0.9
NUP50-215ENST00000484186 MARC1Q5VT66 337 aa9.46□□□□□ -0.9
NUP50-215ENST00000484186 PNCKQ6P2M8 343 aa9.46□□□□□ -0.9
NUP50-215ENST00000484186 IGF2-ASQ6U949 168 aa9.46□□□□□ -0.9
NUP50-215ENST00000484186 LRRC49Q8IUZ0 686 aa9.46□□□□□ -0.9
NUP50-215ENST00000484186 SPACA3Q8IXA5 215 aa9.46□□□□□ -0.9
NUP50-215ENST00000484186 CBARPQ8N350 705 aaPredicted RBP9.46□□□□□ -0.9
NUP50-215ENST00000484186 PGBD5Q8N414 524 aa9.46□□□□□ -0.9
NUP50-215ENST00000484186 ATPAF2Q8N5M1 289 aa9.46□□□□□ -0.9
NUP50-215ENST00000484186 ARL10Q8N8L6 244 aa9.46□□□□□ -0.9
NUP50-215ENST00000484186 OR6C4Q8NGE1 309 aa9.46□□□□□ -0.9
NUP50-215ENST00000484186 OR56A4Q8NGH8 313 aa9.46□□□□□ -0.9
NUP50-215ENST00000484186 PCDH19Q8TAB3 1148 aa9.46□□□□□ -0.9
NUP50-215ENST00000484186 PDCD6IPQ8WUM4 868 aaKnown RBP9.46□□□□□ -0.9
NUP50-215ENST00000484186 ATXN7L3BQ96GX2 97 aa9.46□□□□□ -0.9
NUP50-215ENST00000484186 HIC2Q96JB3 615 aa9.46□□□□□ -0.9
NUP50-215ENST00000484186 BBC3Q96PG8 261 aaPredicted RBP9.46□□□□□ -0.9
NUP50-215ENST00000484186 RBM15Q96T37 977 aaKnown RBP eCLIP9.46□□□□□ -0.9
NUP50-215ENST00000484186 MGME1Q9BQP7 344 aa9.46□□□□□ -0.9
NUP50-215ENST00000484186 NOD2Q9HC29 1040 aa9.46□□□□□ -0.9
NUP50-215ENST00000484186 KCTD5Q9NXV2 234 aa9.46□□□□□ -0.9
NUP50-215ENST00000484186 SIRPGQ9P1W8 387 aa9.46□□□□□ -0.9
NUP50-215ENST00000484186 B4GALT6Q9UBX8 382 aa9.46□□□□□ -0.9
NUP50-215ENST00000484186 PHTF1Q9UMS5 762 aa9.46□□□□□ -0.9
NUP50-215ENST00000484186 SATB2Q9UPW6 733 aa9.46□□□□□ -0.9
NUP50-215ENST00000484186 LRRK1Q38SD2 2015 aa9.46□□□□□ -0.9
NUP50-215ENST00000484186 A0A1W2PNU3 283 aaPredicted RBP9.45□□□□□ -0.9
NUP50-215ENST00000484186 EIF4E1BA6NMX2 242 aaKnown RBP9.45□□□□□ -0.9
NUP50-215ENST00000484186 PDE2AO00408 941 aaPredicted RBP9.45□□□□□ -0.9
NUP50-215ENST00000484186 NTN3O00634 580 aaPredicted RBP9.45□□□□□ -0.9
NUP50-215ENST00000484186 CPP00450 1065 aa9.45□□□□□ -0.9
NUP50-215ENST00000484186 GYPCP04921 128 aa9.45□□□□□ -0.9
NUP50-215ENST00000484186 CYP2A6P11509 494 aaPredicted RBP9.45□□□□□ -0.9
NUP50-215ENST00000484186 RBMS1P29558 406 aaKnown RBP9.45□□□□□ -0.9
NUP50-215ENST00000484186 VIPR1P32241 457 aa9.45□□□□□ -0.9
NUP50-215ENST00000484186 SSR1P43307 286 aaKnown RBP9.45□□□□□ -0.9
NUP50-215ENST00000484186 MMP13P45452 471 aa9.45□□□□□ -0.9
NUP50-215ENST00000484186 MAXP61244 160 aa9.45□□□□□ -0.9
NUP50-215ENST00000484186 TLE3Q04726 772 aa9.45□□□□□ -0.9
NUP50-215ENST00000484186 SPIDRQ14159 915 aa9.45□□□□□ -0.9
NUP50-215ENST00000484186 CNGA3Q16281 694 aa9.45□□□□□ -0.9
NUP50-215ENST00000484186 C3orf38Q5JPI3 329 aa9.45□□□□□ -0.9
NUP50-215ENST00000484186 KCTD16Q68DU8 428 aa9.45□□□□□ -0.9
NUP50-215ENST00000484186 OGFOD3Q6PK18 319 aa9.45□□□□□ -0.9
NUP50-215ENST00000484186 TAF8Q7Z7C8 310 aa9.45□□□□□ -0.9
NUP50-215ENST00000484186 PELI3Q8N2H9 469 aa9.45□□□□□ -0.9
NUP50-215ENST00000484186 TEX26Q8N6G2 289 aa9.45□□□□□ -0.9
NUP50-215ENST00000484186 KYQ8NBH2 561 aa9.45□□□□□ -0.9
NUP50-215ENST00000484186 GPR156Q8NFN8 814 aa9.45□□□□□ -0.9
NUP50-215ENST00000484186 FAM71BQ8TC56 605 aa9.45□□□□□ -0.9
NUP50-215ENST00000484186 OR1E3Q8WZA6 343 aa9.45□□□□□ -0.9
NUP50-215ENST00000484186 CCDC74AQ96AQ1 378 aa9.45□□□□□ -0.9
NUP50-215ENST00000484186 SCRN2Q96FV2 425 aa9.45□□□□□ -0.9
NUP50-215ENST00000484186 PDXPQ96GD0 296 aa9.45□□□□□ -0.9
NUP50-215ENST00000484186 PRR11Q96HE9 360 aaPredicted RBP9.45□□□□□ -0.9
NUP50-215ENST00000484186 NAF1Q96HR8 494 aaKnown RBP9.45□□□□□ -0.9
NUP50-215ENST00000484186 COQ10AQ96MF6 247 aa9.45□□□□□ -0.9
NUP50-215ENST00000484186 SLC46A1Q96NT5 459 aa9.45□□□□□ -0.9
NUP50-215ENST00000484186 FCRL3Q96P31 734 aaPredicted RBP9.45□□□□□ -0.9
NUP50-215ENST00000484186 UBL7Q96S82 380 aaPredicted RBP9.45□□□□□ -0.9
NUP50-215ENST00000484186 LGMNQ99538 433 aa9.45□□□□□ -0.9
NUP50-215ENST00000484186 LGR4Q9BXB1 951 aa9.45□□□□□ -0.9
NUP50-215ENST00000484186 FGF22Q9HCT0 170 aa9.45□□□□□ -0.9
NUP50-215ENST00000484186 ASCL3Q9NQ33 180 aa9.45□□□□□ -0.9
NUP50-215ENST00000484186 MRPL40Q9NQ50 206 aaKnown RBP9.45□□□□□ -0.9
NUP50-215ENST00000484186 THSD1Q9NS62 852 aa9.45□□□□□ -0.9
NUP50-215ENST00000484186 IFNKQ9P0W0 207 aa9.45□□□□□ -0.9
NUP50-215ENST00000484186 RCOR3Q9P2K3 495 aaPredicted RBP9.45□□□□□ -0.9
NUP50-215ENST00000484186 PPIL1Q9Y3C6 166 aa9.45□□□□□ -0.9
NUP50-215ENST00000484186 PCDHGA8Q9Y5G5 932 aa9.45□□□□□ -0.9
NUP50-215ENST00000484186 ITPR1Q14643 2758 aa9.44□□□□□ -0.9
NUP50-215ENST00000484186 CCDC187A0A096LP49 1063 aa9.44□□□□□ -0.9
NUP50-215ENST00000484186 CASC3O15234 703 aaKnown RBP9.44□□□□□ -0.9
NUP50-215ENST00000484186 HEXIM1O94992 359 aaKnown RBP9.44□□□□□ -0.9
NUP50-215ENST00000484186 PGLSO95336 258 aa9.44□□□□□ -0.9
NUP50-215ENST00000484186 CD48P09326 243 aa9.44□□□□□ -0.9
NUP50-215ENST00000484186 HNRNPH3P31942 346 aaKnown RBP9.44□□□□□ -0.9
NUP50-215ENST00000484186 CASP14P31944 242 aa9.44□□□□□ -0.9
NUP50-215ENST00000484186 ARSEP51690 589 aa9.44□□□□□ -0.9
NUP50-215ENST00000484186 CCL7P80098 99 aa9.44□□□□□ -0.9
NUP50-215ENST00000484186 ITKQ08881 620 aa9.44□□□□□ -0.9
NUP50-215ENST00000484186 TRAF2Q12933 501 aa9.44□□□□□ -0.9
NUP50-215ENST00000484186 MMRN1Q13201 1228 aa9.44□□□□□ -0.9
NUP50-215ENST00000484186 ARHGEF7Q14155 803 aa9.44□□□□□ -0.9
NUP50-215ENST00000484186 PAFAH1B3Q15102 231 aaKnown RBP9.44□□□□□ -0.9
NUP50-215ENST00000484186 TSR1Q2NL82 804 aaKnown RBP9.44□□□□□ -0.9
NUP50-215ENST00000484186 ATP13A4Q4VNC1 1196 aa9.44□□□□□ -0.9
NUP50-215ENST00000484186 ARMC12Q5T9G4 340 aa9.44□□□□□ -0.9
NUP50-215ENST00000484186 BROXQ5VW32 411 aa9.44□□□□□ -0.9
NUP50-215ENST00000484186 DENND2CQ68D51 928 aa9.44□□□□□ -0.9
NUP50-215ENST00000484186 FOXR1Q6PIV2 292 aa9.44□□□□□ -0.9
NUP50-215ENST00000484186 GPR155Q7Z3F1 870 aa9.44□□□□□ -0.9
NUP50-215ENST00000484186 KCTD6Q8NC69 237 aa9.44□□□□□ -0.9
NUP50-215ENST00000484186 FAM46DQ8NEK8 389 aa9.44□□□□□ -0.9
NUP50-215ENST00000484186 WDR36Q8NI36 951 aaKnown RBP9.44□□□□□ -0.9
NUP50-215ENST00000484186 ZNF564Q8TBZ8 553 aaPredicted RBP9.44□□□□□ -0.9
NUP50-215ENST00000484186 KCNE4Q8WWG9 221 aa9.44□□□□□ -0.9
NUP50-215ENST00000484186 NUS1Q96E22 293 aa9.44□□□□□ -0.9
NUP50-215ENST00000484186 GFM1Q96RP9 751 aaKnown RBP9.44□□□□□ -0.9
NUP50-215ENST00000484186 TEX101Q9BY14 249 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms