RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 FOXN3O00409 490 aaPredicted RBP10.91□□□□□ -0.66
SMARCC1-205ENST00000483847 TNFRSF10CO14798 259 aa10.91□□□□□ -0.66
SMARCC1-205ENST00000483847 PPM1DO15297 605 aa10.91□□□□□ -0.66
SMARCC1-205ENST00000483847 CAPN5O15484 640 aaPredicted RBP10.91□□□□□ -0.66
SMARCC1-205ENST00000483847 BUB1BO60566 1050 aaPredicted RBP10.91□□□□□ -0.66
SMARCC1-205ENST00000483847 RECQL5O94762 991 aaPredicted RBP10.91□□□□□ -0.66
SMARCC1-205ENST00000483847 LRIG2O94898 1065 aa10.91□□□□□ -0.66
SMARCC1-205ENST00000483847 AGFG2O95081 481 aa10.91□□□□□ -0.66
SMARCC1-205ENST00000483847 FUCA1P04066 466 aa10.91□□□□□ -0.66
SMARCC1-205ENST00000483847 THRAP10827 490 aa10.91□□□□□ -0.66
SMARCC1-205ENST00000483847 CCNB1P14635 433 aa10.91□□□□□ -0.66
SMARCC1-205ENST00000483847 GM2AP17900 193 aa10.91□□□□□ -0.66
SMARCC1-205ENST00000483847 GNLYP22749 145 aa10.91□□□□□ -0.66
SMARCC1-205ENST00000483847 CSTF2P33240 577 aaKnown RBP eCLIP10.91□□□□□ -0.66
SMARCC1-205ENST00000483847 ADRA1BP35368 520 aa10.91□□□□□ -0.66
SMARCC1-205ENST00000483847 SCNN1AP37088 669 aa10.91□□□□□ -0.66
SMARCC1-205ENST00000483847 RALGDSQ12967 914 aa10.91□□□□□ -0.66
SMARCC1-205ENST00000483847 CYTH1Q15438 398 aa10.91□□□□□ -0.66
SMARCC1-205ENST00000483847 PHLDB2Q86SQ0 1253 aa10.91□□□□□ -0.66
SMARCC1-205ENST00000483847 FAM129CQ86XR2 697 aa10.91□□□□□ -0.66
SMARCC1-205ENST00000483847 ZNF354CQ86Y25 554 aa10.91□□□□□ -0.66
SMARCC1-205ENST00000483847 HSCBQ8IWL3 235 aa10.91□□□□□ -0.66
SMARCC1-205ENST00000483847 NRSN1Q8IZ57 195 aa10.91□□□□□ -0.66
SMARCC1-205ENST00000483847 BMPERQ8N8U9 685 aa10.91□□□□□ -0.66
SMARCC1-205ENST00000483847 CCDC112Q8NEF3 446 aa10.91□□□□□ -0.66
SMARCC1-205ENST00000483847 OR4D9Q8NGE8 314 aa10.91□□□□□ -0.66
SMARCC1-205ENST00000483847 KIAA1524Q8TCG1 905 aa10.91□□□□□ -0.66
SMARCC1-205ENST00000483847 ZDHHC1Q8WTX9 485 aa10.91□□□□□ -0.66
SMARCC1-205ENST00000483847 PTCD2Q8WV60 388 aaKnown RBP10.91□□□□□ -0.66
SMARCC1-205ENST00000483847 C18orf8Q96DM3 657 aa10.91□□□□□ -0.66
SMARCC1-205ENST00000483847 CTRCQ99895 268 aa10.91□□□□□ -0.66
SMARCC1-205ENST00000483847 ASPSCR1Q9BZE9 553 aa10.91□□□□□ -0.66
SMARCC1-205ENST00000483847 SUV39H2Q9H5I1 410 aa10.91□□□□□ -0.66
SMARCC1-205ENST00000483847 CACNA1DQ01668 2161 aa10.91□□□□□ -0.66
SMARCC1-205ENST00000483847 IGHV1OR21-1A0A087WYE8 117 aa10.9□□□□□ -0.66
SMARCC1-205ENST00000483847 PRSS38A1L453 326 aa10.9□□□□□ -0.66
SMARCC1-205ENST00000483847 A1L4Q6 167 aa10.9□□□□□ -0.66
SMARCC1-205ENST00000483847 ZSCAN5CA6NGD5 496 aaPredicted RBP10.9□□□□□ -0.66
SMARCC1-205ENST00000483847 B4E171 279 aa10.9□□□□□ -0.66
SMARCC1-205ENST00000483847 GNA14O95837 355 aa10.9□□□□□ -0.66
SMARCC1-205ENST00000483847 KELP23276 732 aa10.9□□□□□ -0.66
SMARCC1-205ENST00000483847 AK4P27144 223 aaPredicted RBP10.9□□□□□ -0.66
SMARCC1-205ENST00000483847 CDH5P33151 784 aaPredicted RBP10.9□□□□□ -0.66
SMARCC1-205ENST00000483847 TRIM23P36406 574 aa10.9□□□□□ -0.66
SMARCC1-205ENST00000483847 TSPAN7P41732 249 aa10.9□□□□□ -0.66
SMARCC1-205ENST00000483847 NRG1Q02297 640 aaPredicted RBP10.9□□□□□ -0.66
SMARCC1-205ENST00000483847 TRA2AQ13595 282 aaKnown RBP eCLIP10.9□□□□□ -0.66
SMARCC1-205ENST00000483847 CLPPQ16740 277 aaPredicted RBP10.9□□□□□ -0.66
SMARCC1-205ENST00000483847 CDO1Q16878 200 aa10.9□□□□□ -0.66
SMARCC1-205ENST00000483847 C15orf59Q2T9L4 293 aaPredicted RBP10.9□□□□□ -0.66
SMARCC1-205ENST00000483847 INO80DQ53TQ3 878 aaPredicted RBP10.9□□□□□ -0.66
SMARCC1-205ENST00000483847 DCAF12Q5T6F0 453 aa10.9□□□□□ -0.66
SMARCC1-205ENST00000483847 CAPRIN2Q6IMN6 1127 aaKnown RBP10.9□□□□□ -0.66
SMARCC1-205ENST00000483847 ERAP2Q6P179 960 aa10.9□□□□□ -0.66
SMARCC1-205ENST00000483847 C16orf46Q6P387 395 aa10.9□□□□□ -0.66
SMARCC1-205ENST00000483847 CAMK1DQ8IU85 385 aa10.9□□□□□ -0.66
SMARCC1-205ENST00000483847 NLGN4XQ8N0W4 816 aa10.9□□□□□ -0.66
SMARCC1-205ENST00000483847 TMEM35BQ8NCS4 154 aa10.9□□□□□ -0.66
SMARCC1-205ENST00000483847 NLGN4YQ8NFZ3 816 aaPredicted RBP10.9□□□□□ -0.66
SMARCC1-205ENST00000483847 STARD8Q92502 1023 aa10.9□□□□□ -0.66
SMARCC1-205ENST00000483847 KIAA1143Q96AT1 154 aaPredicted RBP10.9□□□□□ -0.66
SMARCC1-205ENST00000483847 RTP4Q96DX8 246 aa10.9□□□□□ -0.66
SMARCC1-205ENST00000483847 NCAPGQ9BPX3 1015 aa10.9□□□□□ -0.66
SMARCC1-205ENST00000483847 CARS2Q9HA77 564 aaKnown RBP10.9□□□□□ -0.66
SMARCC1-205ENST00000483847 SIX2Q9NPC8 291 aa10.9□□□□□ -0.66
SMARCC1-205ENST00000483847 TAAR2Q9P1P5 351 aa10.9□□□□□ -0.66
SMARCC1-205ENST00000483847 ATP8A1Q9Y2Q0 1164 aa10.9□□□□□ -0.66
SMARCC1-205ENST00000483847 MRPS18BQ9Y676 258 aaKnown RBP10.9□□□□□ -0.66
SMARCC1-205ENST00000483847 A8MX80 341 aa10.89□□□□□ -0.67
SMARCC1-205ENST00000483847 TEX33O43247 280 aa10.89□□□□□ -0.67
SMARCC1-205ENST00000483847 SEMA7AO75326 666 aa10.89□□□□□ -0.67
SMARCC1-205ENST00000483847 HOXC4P09017 264 aaPredicted RBP10.89□□□□□ -0.67
SMARCC1-205ENST00000483847 PON1P27169 355 aa10.89□□□□□ -0.67
SMARCC1-205ENST00000483847 MAP4P27816 1152 aaKnown RBP10.89□□□□□ -0.67
SMARCC1-205ENST00000483847 STAT1P42224 750 aa10.89□□□□□ -0.67
SMARCC1-205ENST00000483847 GPR3P46089 330 aa10.89□□□□□ -0.67
SMARCC1-205ENST00000483847 ZNF787Q6DD87 383 aa10.89□□□□□ -0.67
SMARCC1-205ENST00000483847 SLC30A9Q6PML9 568 aa10.89□□□□□ -0.67
SMARCC1-205ENST00000483847 LIPIQ6XZB0 460 aa10.89□□□□□ -0.67
SMARCC1-205ENST00000483847 GBP6Q6ZN66 633 aa10.89□□□□□ -0.67
SMARCC1-205ENST00000483847 ZNF761Q86XN6 746 aaPredicted RBP10.89□□□□□ -0.67
SMARCC1-205ENST00000483847 NAGSQ8N159 534 aa10.89□□□□□ -0.67
SMARCC1-205ENST00000483847 CCDC185Q8N715 623 aa10.89□□□□□ -0.67
SMARCC1-205ENST00000483847 TEX19Q8NA77 164 aa10.89□□□□□ -0.67
SMARCC1-205ENST00000483847 HCAR2Q8TDS4 363 aa10.89□□□□□ -0.67
SMARCC1-205ENST00000483847 CASKIN2Q8WXE0 1202 aa10.89□□□□□ -0.67
SMARCC1-205ENST00000483847 TBC1D31Q96DN5 1066 aa10.89□□□□□ -0.67
SMARCC1-205ENST00000483847 RNF31Q96EP0 1072 aa10.89□□□□□ -0.67
SMARCC1-205ENST00000483847 FAM81BQ96LP2 452 aa10.89□□□□□ -0.67
SMARCC1-205ENST00000483847 WDR26Q9H7D7 661 aa10.89□□□□□ -0.67
SMARCC1-205ENST00000483847 APMAPQ9HDC9 416 aa10.89□□□□□ -0.67
SMARCC1-205ENST00000483847 METTL5Q9NRN9 209 aaKnown RBP10.89□□□□□ -0.67
SMARCC1-205ENST00000483847 TMEM51Q9NW97 253 aa10.89□□□□□ -0.67
SMARCC1-205ENST00000483847 DNAJC12Q9UKB3 198 aa10.89□□□□□ -0.67
SMARCC1-205ENST00000483847 KCNMB2Q9Y691 235 aa10.89□□□□□ -0.67
SMARCC1-205ENST00000483847 BICDL2A1A5D9 508 aa10.88□□□□□ -0.67
SMARCC1-205ENST00000483847 A8MU76 341 aa10.88□□□□□ -0.67
SMARCC1-205ENST00000483847 PDGFAP04085 211 aa10.88□□□□□ -0.67
SMARCC1-205ENST00000483847 CEACAM5P06731 702 aa10.88□□□□□ -0.67
SMARCC1-205ENST00000483847 PLEKP08567 350 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms