RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 ATP8A1Q9Y2Q0 1164 aa7.42□□□□□ -1.22
CSDE1-206ENST00000483030 TLN1Q9Y490 2541 aaKnown RBP7.41□□□□□ -1.22
CSDE1-206ENST00000483030 TSPAN11A1L157 253 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 CFAP69A5D8W1 941 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 RHPN2P1A8MT19 583 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 A8MX80 341 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.41□□□□□ -1.22
CSDE1-206ENST00000483030 STMND1H3BQB6 276 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 J3KR12 359 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 PES1O00541 588 aaKnown RBP7.41□□□□□ -1.22
CSDE1-206ENST00000483030 TEX33O43247 280 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 CREB3O43889 395 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 FGF1P05230 155 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 HOXC4P09017 264 aaPredicted RBP7.41□□□□□ -1.22
CSDE1-206ENST00000483030 FGF3P11487 239 aaPredicted RBP7.41□□□□□ -1.22
CSDE1-206ENST00000483030 KRT3P12035 628 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 UCHL3P15374 230 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 CHRNB2P17787 502 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 KELP23276 732 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 CD1CP29017 333 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 RFC1P35251 1148 aaPredicted RBP7.41□□□□□ -1.22
CSDE1-206ENST00000483030 TRIM23P36406 574 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 MMP12P39900 470 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 ATP1A2P50993 1020 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 ARSDP51689 593 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 MAZP56270 477 aaKnown RBP7.41□□□□□ -1.22
CSDE1-206ENST00000483030 KIAA1024LP59773 190 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 CDR2Q01850 454 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 GRM3Q14832 879 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 PARP15Q460N3 678 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 EFHC2Q5JST6 749 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 SCYL2Q6P3W7 929 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 BORAQ6PGQ7 559 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 BRAT1Q6PJG6 821 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 WDR59Q6PJI9 974 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 LIPIQ6XZB0 460 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 SRLQ86TD4 932 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 UMODL1-AS1Q8N2C9 162 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 IL22RA1Q8N6P7 574 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 MLKLQ8NB16 471 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 KIAA1524Q8TCG1 905 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 PMEPA1Q969W9 287 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 NTAN1Q96AB6 310 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 TAAR9Q96RI9 348 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 NUDT22Q9BRQ3 303 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 TUBGCP2Q9BSJ2 902 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 STK33Q9BYT3 514 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 B3GNT4Q9C0J1 378 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 EPN3Q9H201 632 aa7.41□□□□□ -1.22
CSDE1-206ENST00000483030 NOCTQ9UK39 431 aaKnown RBP7.41□□□□□ -1.22
CSDE1-206ENST00000483030 PTPN13Q12923 2485 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 IGHV5-10-1A0A0J9YXX1 117 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 PRSS38A1L453 326 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 WASH4PA8MWX3 477 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 F8VZ95 297 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 HGSO14964 777 aaPredicted RBP7.4□□□□□ -1.22
CSDE1-206ENST00000483030 GFPT2O94808 682 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 ECEL1O95672 775 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 FUCA1P04066 466 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 NTRK1P04629 796 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 CYP1A1P04798 512 aaPredicted RBP7.4□□□□□ -1.22
CSDE1-206ENST00000483030 ELFN1P0C7U0 828 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 CCNB1P14635 433 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 LIFP15018 202 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 GM2AP17900 193 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 GPD1P21695 349 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 MPSTP25325 297 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 UGT1A3P35503 534 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 STAT1P42224 750 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 CCR10P46092 362 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 RGRP47804 291 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 POLE2P56282 527 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 FMO1Q01740 532 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 RALGDSQ12967 914 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 KCNAB2Q13303 367 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 BIRC2Q13490 618 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 ACOX1Q15067 660 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 NKAIN2Q5VXU1 208 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 AFMIDQ63HM1 303 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 PNCKQ6P2M8 343 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 C17orf82Q86X59 251 aaPredicted RBP7.4□□□□□ -1.22
CSDE1-206ENST00000483030 ZNF677Q86XU0 584 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 NRROSQ86YC3 692 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 FAM114A1Q8IWE2 563 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 CACNA2D3Q8IZS8 1091 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 PELI3Q8N2H9 469 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 PAF1Q8N7H5 531 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 TSEN2Q8NCE0 465 aaKnown RBP7.4□□□□□ -1.22
CSDE1-206ENST00000483030 GPBAR1Q8TDU6 330 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 ZDHHC1Q8WTX9 485 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 ART4Q93070 314 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 CELF6Q96J87 481 aaKnown RBP7.4□□□□□ -1.22
CSDE1-206ENST00000483030 CCDC74BQ96LY2 380 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 TUBGCP5Q96RT8 1024 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 PCDHB18PQ96TA0 734 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 PLCD4Q9BRC7 762 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 SELENOOQ9BVL4 669 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 CDH19Q9H159 772 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 WDR26Q9H7D7 661 aa7.4□□□□□ -1.22
CSDE1-206ENST00000483030 ATP13A3Q9H7F0 1226 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms