RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 TFDP2Q14188 446 aa13.92□□□□□ -0.18
VARS-225ENST00000482996 CNGA3Q16281 694 aa13.92□□□□□ -0.18
VARS-225ENST00000482996 PRRT3Q5FWE3 981 aa13.92□□□□□ -0.18
VARS-225ENST00000482996 ALG1LQ6GMV1 187 aa13.92□□□□□ -0.18
VARS-225ENST00000482996 ZCCHC8Q6NZY4 707 aaKnown RBP13.92□□□□□ -0.18
VARS-225ENST00000482996 HID1Q8IV36 788 aa13.92□□□□□ -0.18
VARS-225ENST00000482996 RBFAQ8N0V3 343 aa13.92□□□□□ -0.18
VARS-225ENST00000482996 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.92□□□□□ -0.18
VARS-225ENST00000482996 PLD5Q8N7P1 536 aa13.92□□□□□ -0.18
VARS-225ENST00000482996 FAM181AQ8N9Y4 354 aa13.92□□□□□ -0.18
VARS-225ENST00000482996 TPCN2Q8NHX9 752 aa13.92□□□□□ -0.18
VARS-225ENST00000482996 ZCCHC14Q8WYQ9 949 aaKnown RBP13.92□□□□□ -0.18
VARS-225ENST00000482996 RNF25Q96BH1 459 aaPredicted RBP13.92□□□□□ -0.18
VARS-225ENST00000482996 SCRN2Q96FV2 425 aa13.92□□□□□ -0.18
VARS-225ENST00000482996 APOLD1Q96LR9 279 aa13.92□□□□□ -0.18
VARS-225ENST00000482996 WDR92Q96MX6 357 aa13.92□□□□□ -0.18
VARS-225ENST00000482996 BRD8Q9H0E9 1235 aa13.92□□□□□ -0.18
VARS-225ENST00000482996 CAAP1Q9H8G2 361 aa13.92□□□□□ -0.18
VARS-225ENST00000482996 OR1A2Q9Y585 309 aa13.92□□□□□ -0.18
VARS-225ENST00000482996 ALG6Q9Y672 507 aa13.92□□□□□ -0.18
VARS-225ENST00000482996 EPN1Q9Y6I3 576 aaPredicted RBP13.92□□□□□ -0.18
VARS-225ENST00000482996 SPEGQ15772 3267 aa13.91□□□□□ -0.18
VARS-225ENST00000482996 ANKRD11Q6UB99 2663 aaPredicted RBP13.91□□□□□ -0.18
VARS-225ENST00000482996 LMO7DNF2Z398 122 aa13.91□□□□□ -0.18
VARS-225ENST00000482996 PSMD11O00231 422 aa13.91□□□□□ -0.18
VARS-225ENST00000482996 TPP1O14773 563 aa13.91□□□□□ -0.18
VARS-225ENST00000482996 RASGRP1O95267 797 aa13.91□□□□□ -0.18
VARS-225ENST00000482996 NDUFA10O95299 355 aa13.91□□□□□ -0.18
VARS-225ENST00000482996 HLA-DQB2P05538 268 aa13.91□□□□□ -0.18
VARS-225ENST00000482996 ANXA6P08133 673 aa13.91□□□□□ -0.18
VARS-225ENST00000482996 GIMD1P0DJR0 217 aa13.91□□□□□ -0.18
VARS-225ENST00000482996 CKMT1AP12532 417 aa13.91□□□□□ -0.18
VARS-225ENST00000482996 CTSEP14091 401 aa13.91□□□□□ -0.18
VARS-225ENST00000482996 KELP23276 732 aa13.91□□□□□ -0.18
VARS-225ENST00000482996 DSC2Q02487 901 aa13.91□□□□□ -0.18
VARS-225ENST00000482996 AP1B1Q10567 949 aa13.91□□□□□ -0.18
VARS-225ENST00000482996 DENND2CQ68D51 928 aa13.91□□□□□ -0.18
VARS-225ENST00000482996 C11orf63Q6NUN7 778 aa13.91□□□□□ -0.18
VARS-225ENST00000482996 ENPP7Q6UWV6 458 aa13.91□□□□□ -0.18
VARS-225ENST00000482996 MFSD7Q6UXD7 560 aa13.91□□□□□ -0.18
VARS-225ENST00000482996 BZW1Q7L1Q6 419 aaKnown RBP13.91□□□□□ -0.18
VARS-225ENST00000482996 GAS2L3Q86XJ1 694 aa13.91□□□□□ -0.18
VARS-225ENST00000482996 FSTL5Q8N475 847 aaPredicted RBP13.91□□□□□ -0.18
VARS-225ENST00000482996 LRRN4Q8WUT4 740 aa13.91□□□□□ -0.18
VARS-225ENST00000482996 PIH1D2Q8WWB5 315 aa13.91□□□□□ -0.18
VARS-225ENST00000482996 GLMNQ92990 594 aa13.91□□□□□ -0.18
VARS-225ENST00000482996 NUS1Q96E22 293 aa13.91□□□□□ -0.18
VARS-225ENST00000482996 CALR3Q96L12 384 aaKnown RBP13.91□□□□□ -0.18
VARS-225ENST00000482996 COQ10AQ96MF6 247 aa13.91□□□□□ -0.18
VARS-225ENST00000482996 MCCC1Q96RQ3 725 aaPredicted RBP13.91□□□□□ -0.18
VARS-225ENST00000482996 LGMNQ99538 433 aa13.91□□□□□ -0.18
VARS-225ENST00000482996 TCEAL2Q9H3H9 227 aaPredicted RBP13.91□□□□□ -0.18
VARS-225ENST00000482996 KLQ9UEF7 1012 aa13.91□□□□□ -0.18
VARS-225ENST00000482996 SALL4Q9UJQ4 1053 aa13.91□□□□□ -0.18
VARS-225ENST00000482996 DNPEPQ9ULA0 475 aa13.91□□□□□ -0.18
VARS-225ENST00000482996 DOLKQ9UPQ8 538 aa13.91□□□□□ -0.18
VARS-225ENST00000482996 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.91□□□□□ -0.18
VARS-225ENST00000482996 PPIL1Q9Y3C6 166 aa13.91□□□□□ -0.18
VARS-225ENST00000482996 LRRK1Q38SD2 2015 aa13.91□□□□□ -0.18
VARS-225ENST00000482996 KMT2BQ9UMN6 2715 aaPredicted RBP13.9□□□□□ -0.18
VARS-225ENST00000482996 FAM149AA5PLN7 773 aa13.9□□□□□ -0.18
VARS-225ENST00000482996 NPIPB15A6NHN6 443 aaPredicted RBP13.9□□□□□ -0.18
VARS-225ENST00000482996 SOWAHDA6NJG2 315 aa13.9□□□□□ -0.18
VARS-225ENST00000482996 KCNK1O00180 336 aa13.9□□□□□ -0.18
VARS-225ENST00000482996 PDE2AO00408 941 aaPredicted RBP13.9□□□□□ -0.18
VARS-225ENST00000482996 FZD6O60353 706 aa13.9□□□□□ -0.18
VARS-225ENST00000482996 TNFP01375 233 aa13.9□□□□□ -0.18
VARS-225ENST00000482996 PDHA1P08559 390 aa13.9□□□□□ -0.18
VARS-225ENST00000482996 HOXC4P09017 264 aaPredicted RBP13.9□□□□□ -0.18
VARS-225ENST00000482996 ALPIP09923 528 aa13.9□□□□□ -0.18
VARS-225ENST00000482996 CTPS1P17812 591 aa13.9□□□□□ -0.18
VARS-225ENST00000482996 FECHP22830 423 aa13.9□□□□□ -0.18
VARS-225ENST00000482996 NR2C2P49116 596 aa13.9□□□□□ -0.18
VARS-225ENST00000482996 RPIAP49247 311 aa13.9□□□□□ -0.18
VARS-225ENST00000482996 HK3P52790 923 aa13.9□□□□□ -0.18
VARS-225ENST00000482996 KIAA1024LP59773 190 aa13.9□□□□□ -0.18
VARS-225ENST00000482996 SRP54P61011 504 aaKnown RBP13.9□□□□□ -0.18
VARS-225ENST00000482996 RPL26P61254 145 aaKnown RBP13.9□□□□□ -0.18
VARS-225ENST00000482996 DYNLT1P63172 113 aa13.9□□□□□ -0.18
VARS-225ENST00000482996 IFI35P80217 286 aaPredicted RBP13.9□□□□□ -0.18
VARS-225ENST00000482996 C1orf61Q13536 156 aa13.9□□□□□ -0.18
VARS-225ENST00000482996 ELOCQ15369 112 aa13.9□□□□□ -0.18
VARS-225ENST00000482996 ALG11Q2TAA5 492 aa13.9□□□□□ -0.18
VARS-225ENST00000482996 DEFB133Q30KQ1 61 aa13.9□□□□□ -0.18
VARS-225ENST00000482996 HES3Q5TGS1 186 aa13.9□□□□□ -0.18
VARS-225ENST00000482996 ESRP1Q6NXG1 681 aaKnown RBP13.9□□□□□ -0.18
VARS-225ENST00000482996 PNCKQ6P2M8 343 aa13.9□□□□□ -0.18
VARS-225ENST00000482996 RD3Q7Z3Z2 195 aa13.9□□□□□ -0.18
VARS-225ENST00000482996 PLA2G15Q8NCC3 412 aa13.9□□□□□ -0.18
VARS-225ENST00000482996 ARRDC2Q8TBH0 407 aa13.9□□□□□ -0.18
VARS-225ENST00000482996 SCG3Q8WXD2 468 aaKnown RBP13.9□□□□□ -0.18
VARS-225ENST00000482996 TSACCQ96A04 125 aaPredicted RBP13.9□□□□□ -0.18
VARS-225ENST00000482996 DTD2Q96FN9 168 aa13.9□□□□□ -0.18
VARS-225ENST00000482996 LRRC61Q9BV99 259 aa13.9□□□□□ -0.18
VARS-225ENST00000482996 TDRD1Q9BXT4 1180 aaKnown RBP13.9□□□□□ -0.18
VARS-225ENST00000482996 WDR26Q9H7D7 661 aa13.9□□□□□ -0.18
VARS-225ENST00000482996 RPL26L1Q9UNX3 145 aaKnown RBP13.9□□□□□ -0.18
VARS-225ENST00000482996 CHKBQ9Y259 395 aa13.9□□□□□ -0.18
VARS-225ENST00000482996 PTPRBP23467 1997 aa13.9□□□□□ -0.18
VARS-225ENST00000482996 ACACAQ13085 2346 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms