RNA–Protein interactions for RNA: ENST00000482630.6

VEGFA-213, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-213ENST00000482630 RD3Q7Z3Z2 195 aa25.28■■□□□ 1.64
VEGFA-213ENST00000482630 RHOT2Q8IXI1 618 aa25.28■■□□□ 1.64
VEGFA-213ENST00000482630 SDR16C5Q8N3Y7 309 aa25.28■■□□□ 1.64
VEGFA-213ENST00000482630 MAPK15Q8TD08 544 aa25.28■■□□□ 1.64
VEGFA-213ENST00000482630 FATE1Q969F0 183 aa25.28■■□□□ 1.64
VEGFA-213ENST00000482630 DEPDC7Q96QD5 511 aa25.28■■□□□ 1.64
VEGFA-213ENST00000482630 ANP32EQ9BTT0 268 aa25.28■■□□□ 1.64
VEGFA-213ENST00000482630 SPTLC3Q9NUV7 552 aa25.28■■□□□ 1.64
VEGFA-213ENST00000482630 CPED1A4D0V7 1026 aa25.27■■□□□ 1.64
VEGFA-213ENST00000482630 EME2A4GXA9 379 aaPredicted RBP25.27■■□□□ 1.64
VEGFA-213ENST00000482630 MATN3O15232 486 aa25.27■■□□□ 1.64
VEGFA-213ENST00000482630 YY2O15391 372 aa25.27■■□□□ 1.64
VEGFA-213ENST00000482630 PGLSO95336 258 aa25.27■■□□□ 1.64
VEGFA-213ENST00000482630 TNFP01375 233 aa25.27■■□□□ 1.64
VEGFA-213ENST00000482630 HOXC4P09017 264 aaPredicted RBP25.27■■□□□ 1.64
VEGFA-213ENST00000482630 CES1P23141 567 aa25.27■■□□□ 1.64
VEGFA-213ENST00000482630 CCNCP24863 283 aa25.27■■□□□ 1.64
VEGFA-213ENST00000482630 CNGA3Q16281 694 aa25.27■■□□□ 1.64
VEGFA-213ENST00000482630 CDCP2Q5VXM1 449 aa25.27■■□□□ 1.64
VEGFA-213ENST00000482630 GUSBP11Q6P575 273 aa25.27■■□□□ 1.64
VEGFA-213ENST00000482630 LVRNQ6Q4G3 990 aa25.27■■□□□ 1.64
VEGFA-213ENST00000482630 USP45Q70EL2 814 aa25.27■■□□□ 1.64
VEGFA-213ENST00000482630 NDUFAF2Q8N183 169 aa25.27■■□□□ 1.64
VEGFA-213ENST00000482630 MAML1Q92585 1016 aa25.27■■□□□ 1.64
VEGFA-213ENST00000482630 COQ10AQ96MF6 247 aa25.27■■□□□ 1.64
VEGFA-213ENST00000482630 TSGA13Q96PP4 275 aa25.27■■□□□ 1.64
VEGFA-213ENST00000482630 SEMA3CQ99985 751 aa25.27■■□□□ 1.64
VEGFA-213ENST00000482630 AMACRQ9UHK6 382 aa25.27■■□□□ 1.64
VEGFA-213ENST00000482630 GPSM3Q9Y4H4 160 aa25.27■■□□□ 1.64
VEGFA-213ENST00000482630 RAI2Q9Y5P3 530 aa25.27■■□□□ 1.64
VEGFA-213ENST00000482630 DMXL2Q8TDJ6 3036 aa25.27■■□□□ 1.64
VEGFA-213ENST00000482630 AKR1B15C9JRZ8 316 aaPredicted RBP25.26■■□□□ 1.63
VEGFA-213ENST00000482630 HEXIM1O94992 359 aaKnown RBP25.26■■□□□ 1.63
VEGFA-213ENST00000482630 MAP3K6O95382 1288 aa25.26■■□□□ 1.63
VEGFA-213ENST00000482630 KRT10P13645 584 aa25.26■■□□□ 1.63
VEGFA-213ENST00000482630 GM2AP17900 193 aa25.26■■□□□ 1.63
VEGFA-213ENST00000482630 KDELR1P24390 212 aa25.26■■□□□ 1.63
VEGFA-213ENST00000482630 GKN2Q86XP6 184 aa25.26■■□□□ 1.63
VEGFA-213ENST00000482630 SLC35F3Q8IY50 421 aa25.26■■□□□ 1.63
VEGFA-213ENST00000482630 OR56A4Q8NGH8 313 aa25.26■■□□□ 1.63
VEGFA-213ENST00000482630 TPCN2Q8NHX9 752 aa25.26■■□□□ 1.63
VEGFA-213ENST00000482630 NAT6Q93015 286 aa25.26■■□□□ 1.63
VEGFA-213ENST00000482630 FUBP1Q96AE4 644 aaKnown RBP25.26■■□□□ 1.63
VEGFA-213ENST00000482630 NUS1Q96E22 293 aa25.26■■□□□ 1.63
VEGFA-213ENST00000482630 SCRN2Q96FV2 425 aa25.26■■□□□ 1.63
VEGFA-213ENST00000482630 ZNF830Q96NB3 372 aaPredicted RBP25.26■■□□□ 1.63
VEGFA-213ENST00000482630 WDR26Q9H7D7 661 aa25.26■■□□□ 1.63
VEGFA-213ENST00000482630 DGKBQ9Y6T7 804 aa25.26■■□□□ 1.63
VEGFA-213ENST00000482630 GOLGA4Q13439 2230 aaKnown RBP25.25■■□□□ 1.63
VEGFA-213ENST00000482630 PSMD11O00231 422 aa25.25■■□□□ 1.63
VEGFA-213ENST00000482630 PDE2AO00408 941 aaPredicted RBP25.25■■□□□ 1.63
VEGFA-213ENST00000482630 MTA2O94776 668 aa25.25■■□□□ 1.63
VEGFA-213ENST00000482630 CELA2BP08218 269 aaPredicted RBP25.25■■□□□ 1.63
VEGFA-213ENST00000482630 TRIM23P36406 574 aa25.25■■□□□ 1.63
VEGFA-213ENST00000482630 ARHGEF7Q14155 803 aa25.25■■□□□ 1.63
VEGFA-213ENST00000482630 PNCKQ6P2M8 343 aa25.25■■□□□ 1.63
VEGFA-213ENST00000482630 PQLC3Q8N755 202 aa25.25■■□□□ 1.63
VEGFA-213ENST00000482630 RAPGEF5Q92565 580 aa25.25■■□□□ 1.63
VEGFA-213ENST00000482630 RBM22Q9NW64 420 aaKnown RBP eCLIP25.25■■□□□ 1.634e-11■■■■□ 26.1
VEGFA-213ENST00000482630 PPIL1Q9Y3C6 166 aa25.25■■□□□ 1.63
VEGFA-213ENST00000482630 TTLL3Q9Y4R7 772 aa25.25■■□□□ 1.63
VEGFA-213ENST00000482630 ZZEF1O43149 2961 aa25.25■■□□□ 1.63
VEGFA-213ENST00000482630 CFAP47Q6ZTR5 3102 aa25.24■■□□□ 1.63
VEGFA-213ENST00000482630 TNFRSF10CO14798 259 aa25.24■■□□□ 1.63
VEGFA-213ENST00000482630 GBE1Q04446 702 aa25.24■■□□□ 1.63
VEGFA-213ENST00000482630 DENND2CQ68D51 928 aa25.24■■□□□ 1.63
VEGFA-213ENST00000482630 ALG1LQ6GMV1 187 aa25.24■■□□□ 1.63
VEGFA-213ENST00000482630 ARL10Q8N8L6 244 aa25.24■■□□□ 1.63
VEGFA-213ENST00000482630 HDAC11Q96DB2 347 aa25.24■■□□□ 1.63
VEGFA-213ENST00000482630 DTD2Q96FN9 168 aa25.24■■□□□ 1.63
VEGFA-213ENST00000482630 PDXPQ96GD0 296 aa25.24■■□□□ 1.63
VEGFA-213ENST00000482630 RNF157Q96PX1 679 aa25.24■■□□□ 1.63
VEGFA-213ENST00000482630 MCCC1Q96RQ3 725 aaPredicted RBP25.24■■□□□ 1.63
VEGFA-213ENST00000482630 INTUQ9ULD6 942 aa25.24■■□□□ 1.63
VEGFA-213ENST00000482630 LHX6Q9UPM6 363 aa25.24■■□□□ 1.63
VEGFA-213ENST00000482630 LRRD1A4D1F6 860 aa25.23■■□□□ 1.63
VEGFA-213ENST00000482630 TMEM202A6NGA9 273 aa25.23■■□□□ 1.63
VEGFA-213ENST00000482630 NPIPB15A6NHN6 443 aaPredicted RBP25.23■■□□□ 1.63
VEGFA-213ENST00000482630 ZNF487B1APH4 448 aa25.23■■□□□ 1.63
VEGFA-213ENST00000482630 CCNB1P14635 433 aa25.23■■□□□ 1.63
VEGFA-213ENST00000482630 CA4P22748 312 aa25.23■■□□□ 1.63
VEGFA-213ENST00000482630 LHCGRP22888 699 aa25.23■■□□□ 1.63
VEGFA-213ENST00000482630 TBX2Q13207 712 aaPredicted RBP25.23■■□□□ 1.63
VEGFA-213ENST00000482630 TCEA2Q15560 299 aa25.23■■□□□ 1.63
VEGFA-213ENST00000482630 SARM1Q6SZW1 724 aa25.23■■□□□ 1.63
VEGFA-213ENST00000482630 VSIG1Q86XK7 387 aa25.23■■□□□ 1.63
VEGFA-213ENST00000482630 CCNYQ8ND76 341 aa25.23■■□□□ 1.63
VEGFA-213ENST00000482630 TRAF3IP1Q8TDR0 691 aaPredicted RBP25.23■■□□□ 1.63
VEGFA-213ENST00000482630 PIH1D2Q8WWB5 315 aa25.23■■□□□ 1.63
VEGFA-213ENST00000482630 OR1E3Q8WZA6 343 aa25.23■■□□□ 1.63
VEGFA-213ENST00000482630 RBM15Q96T37 977 aaKnown RBP eCLIP25.23■■□□□ 1.631e-8■■□□□ 12.7
VEGFA-213ENST00000482630 TRIM5Q9C035 493 aa25.23■■□□□ 1.63
VEGFA-213ENST00000482630 DTLQ9NZJ0 730 aa25.23■■□□□ 1.63
VEGFA-213ENST00000482630 PADI4Q9UM07 663 aa25.23■■□□□ 1.63
VEGFA-213ENST00000482630 SHROOM3Q8TF72 1996 aa25.23■■□□□ 1.63
VEGFA-213ENST00000482630 FZD6O60353 706 aa25.22■■□□□ 1.63
VEGFA-213ENST00000482630 CSO75390 466 aaKnown RBP25.22■■□□□ 1.63
VEGFA-213ENST00000482630 CTPS1P17812 591 aa25.22■■□□□ 1.63
VEGFA-213ENST00000482630 TGM2P21980 687 aa25.22■■□□□ 1.63
VEGFA-213ENST00000482630 EPHB1P54762 984 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms