RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 COQ6Q9Y2Z9 468 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 TEX264Q9Y6I9 313 aa7.85□□□□□ -1.15
SNX13-208ENST00000482558 GOLGB1Q14789 3259 aaKnown RBP7.84□□□□□ -1.15
SNX13-208ENST00000482558 PSMD3O43242 534 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 TYROBPO43914 113 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 CABYRO75952 493 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 BAG2O95816 211 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 TBX18O95935 607 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 SCG5P05408 212 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 SNRPAP09012 282 aaKnown RBP7.84□□□□□ -1.15
SNX13-208ENST00000482558 INHBBP09529 407 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 TROVE2P10155 538 aaKnown RBP eCLIP7.84□□□□□ -1.15
SNX13-208ENST00000482558 PRKCHP24723 683 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 GCAP28676 217 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 ADORA2BP29275 332 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 GLUD2P49448 558 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 GPX6P59796 221 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 TSPY1Q01534 308 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 TNK2Q07912 1038 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 TMEM62Q0P6H9 643 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 SCAPQ12770 1279 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 POLD3Q15054 466 aaPredicted RBP7.84□□□□□ -1.15
SNX13-208ENST00000482558 CNN3Q15417 329 aaKnown RBP7.84□□□□□ -1.15
SNX13-208ENST00000482558 KCNA10Q16322 511 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 PPP6R3Q5H9R7 873 aaPredicted RBP7.84□□□□□ -1.15
SNX13-208ENST00000482558 FNBP1LQ5T0N5 605 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 STXBP5Q5T5C0 1151 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 RGMBQ6NW40 437 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 BNIPLQ7Z465 357 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 PIGZQ86VD9 579 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 ZC3H18Q86VM9 953 aaKnown RBP7.84□□□□□ -1.15
SNX13-208ENST00000482558 CHSY1Q86X52 802 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 RASAL3Q86YV0 1011 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 SYTL1Q8IYJ3 562 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 ARL10Q8N8L6 244 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 PIWIL2Q8TC59 973 aaKnown RBP7.84□□□□□ -1.15
SNX13-208ENST00000482558 MAGEC3Q8TD91 643 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 CDKL2Q92772 493 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 C1orf159Q96HA4 380 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 CSPG4P5Q96PW8 444 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 SLC2A13Q96QE2 648 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 VAT1Q99536 393 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 ZFYVE21Q9BQ24 234 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 IQCGQ9H095 443 aaKnown RBP7.84□□□□□ -1.15
SNX13-208ENST00000482558 BTBD1Q9H0C5 482 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 NKX2-4Q9H2Z4 354 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 CXorf56Q9H5V9 222 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 DHX35Q9H5Z1 703 aaKnown RBP7.84□□□□□ -1.15
SNX13-208ENST00000482558 NSUN3Q9H649 340 aaKnown RBP7.84□□□□□ -1.15
SNX13-208ENST00000482558 NOL6Q9H6R4 1146 aaKnown RBP7.84□□□□□ -1.15
SNX13-208ENST00000482558 CARS2Q9HA77 564 aaKnown RBP7.84□□□□□ -1.15
SNX13-208ENST00000482558 VPS45Q9NRW7 570 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 TXLNGQ9NUQ3 528 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 IRAK4Q9NWZ3 460 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 PRR13Q9NZ81 148 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 SAE1Q9UBE0 346 aaPredicted RBP7.84□□□□□ -1.15
SNX13-208ENST00000482558 FZD10Q9ULW2 581 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 SLC12A4Q9UP95 1085 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 GPR34Q9UPC5 381 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 HEY1Q9Y5J3 304 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 USH1CQ9Y6N9 552 aa7.84□□□□□ -1.15
SNX13-208ENST00000482558 SCN1AP35498 2009 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 TCRBV9S1A1TA0A576 114 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 MAGEB16A2A368 324 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 A6NLC8 198 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 KBTBD13C9JR72 458 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 F5H0A9 414 aaPredicted RBP7.83□□□□□ -1.16
SNX13-208ENST00000482558 CAPN9O14815 690 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 PPEF2O14830 753 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 KLF11O14901 512 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 ADCY6O43306 1168 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 FRS3O43559 492 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 SIGLEC6O43699 453 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 SKAP2O75563 359 aaPredicted RBP7.83□□□□□ -1.16
SNX13-208ENST00000482558 GRAP2O75791 330 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 DGKIO75912 1065 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 TMEM63AO94886 807 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 TGDSO95455 350 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 APOEP02649 317 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 RARBP10826 455 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 ODC1P11926 461 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 LCP1P13796 627 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 CCDC130P13994 396 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 KRT4P19013 534 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 TAC1P20366 129 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 CYP2B6P20813 491 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 RBL1P28749 1068 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 SERPINB6P35237 376 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 ELK3P41970 407 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 MAGEA3P43357 314 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 SULT1E1P49888 294 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 YWHAGP61981 247 aaKnown RBP eCLIP7.83□□□□□ -1.16
SNX13-208ENST00000482558 COG7P83436 770 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 SLC18A2Q05940 514 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 CDK18Q07002 472 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 FRG1Q14331 258 aaKnown RBP7.83□□□□□ -1.16
SNX13-208ENST00000482558 PAFAH1B3Q15102 231 aaKnown RBP7.83□□□□□ -1.16
SNX13-208ENST00000482558 TAF5Q15542 800 aa7.83□□□□□ -1.16
SNX13-208ENST00000482558 PKN2Q16513 984 aaKnown RBP7.83□□□□□ -1.16
SNX13-208ENST00000482558 PARP6Q2NL67 630 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms