RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 SFTPA2Q8IWL1 248 aa18.62■□□□□ 0.57
CLK1-211ENST00000481641 ARL10Q8N8L6 244 aa18.62■□□□□ 0.57
CLK1-211ENST00000481641 TPCN2Q8NHX9 752 aa18.62■□□□□ 0.57
CLK1-211ENST00000481641 NAT6Q93015 286 aa18.62■□□□□ 0.57
CLK1-211ENST00000481641 ZNF578Q96N58 590 aaPredicted RBP18.62■□□□□ 0.57
CLK1-211ENST00000481641 LGMNQ99538 433 aa18.62■□□□□ 0.57
CLK1-211ENST00000481641 FGF22Q9HCT0 170 aa18.62■□□□□ 0.57
CLK1-211ENST00000481641 IP6K2Q9UHH9 426 aa18.62■□□□□ 0.57
CLK1-211ENST00000481641 CAPN11Q9UMQ6 739 aa18.62■□□□□ 0.57
CLK1-211ENST00000481641 A0A0U1RQS6 177 aa18.61■□□□□ 0.57
CLK1-211ENST00000481641 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.61■□□□□ 0.57
CLK1-211ENST00000481641 CACNB4O00305 520 aaPredicted RBP18.61■□□□□ 0.57
CLK1-211ENST00000481641 HTRA2O43464 458 aaPredicted RBP18.61■□□□□ 0.57
CLK1-211ENST00000481641 IL4RP24394 825 aa18.61■□□□□ 0.57
CLK1-211ENST00000481641 SSR1P43307 286 aaKnown RBP18.61■□□□□ 0.57
CLK1-211ENST00000481641 CDH6P55285 790 aa18.61■□□□□ 0.57
CLK1-211ENST00000481641 TLE3Q04726 772 aa18.61■□□□□ 0.57
CLK1-211ENST00000481641 TRAF2Q12933 501 aa18.61■□□□□ 0.57
CLK1-211ENST00000481641 KRT81Q14533 505 aa18.61■□□□□ 0.57
CLK1-211ENST00000481641 CNGA3Q16281 694 aa18.61■□□□□ 0.57
CLK1-211ENST00000481641 ATP13A4Q4VNC1 1196 aa18.61■□□□□ 0.57
CLK1-211ENST00000481641 CCDC122Q5T0U0 273 aa18.61■□□□□ 0.57
CLK1-211ENST00000481641 ATPAF2Q8N5M1 289 aa18.61■□□□□ 0.57
CLK1-211ENST00000481641 NIPA2Q8N8Q9 360 aa18.61■□□□□ 0.57
CLK1-211ENST00000481641 OR56A4Q8NGH8 313 aa18.61■□□□□ 0.57
CLK1-211ENST00000481641 TEKT4Q8WW24 435 aa18.61■□□□□ 0.57
CLK1-211ENST00000481641 SCG3Q8WXD2 468 aaKnown RBP18.61■□□□□ 0.57
CLK1-211ENST00000481641 CCDC74AQ96AQ1 378 aa18.61■□□□□ 0.57
CLK1-211ENST00000481641 HIC2Q96JB3 615 aa18.61■□□□□ 0.57
CLK1-211ENST00000481641 FCRL3Q96P31 734 aaPredicted RBP18.61■□□□□ 0.57
CLK1-211ENST00000481641 NUDCD1Q96RS6 583 aa18.61■□□□□ 0.57
CLK1-211ENST00000481641 MGME1Q9BQP7 344 aa18.61■□□□□ 0.57
CLK1-211ENST00000481641 ASCL3Q9NQ33 180 aa18.61■□□□□ 0.57
CLK1-211ENST00000481641 IFNKQ9P0W0 207 aa18.61■□□□□ 0.57
CLK1-211ENST00000481641 MOSPD1Q9UJG1 213 aa18.61■□□□□ 0.57
CLK1-211ENST00000481641 DXOO77932 396 aaKnown RBP18.6■□□□□ 0.57
CLK1-211ENST00000481641 CPP00450 1065 aa18.6■□□□□ 0.57
CLK1-211ENST00000481641 GYPCP04921 128 aa18.6■□□□□ 0.57
CLK1-211ENST00000481641 GJC1P36383 396 aa18.6■□□□□ 0.57
CLK1-211ENST00000481641 PDX1P52945 283 aa18.6■□□□□ 0.57
CLK1-211ENST00000481641 PCBP4P57723 403 aaKnown RBP18.6■□□□□ 0.57
CLK1-211ENST00000481641 KIAA1024LP59773 190 aa18.6■□□□□ 0.57
CLK1-211ENST00000481641 CCL7P80098 99 aa18.6■□□□□ 0.57
CLK1-211ENST00000481641 PNCKQ6P2M8 343 aa18.6■□□□□ 0.57
CLK1-211ENST00000481641 ALKBH5Q6P6C2 394 aaKnown RBP18.6■□□□□ 0.57
CLK1-211ENST00000481641 LVRNQ6Q4G3 990 aa18.6■□□□□ 0.57
CLK1-211ENST00000481641 LSMEM2Q8N112 164 aa18.6■□□□□ 0.57
CLK1-211ENST00000481641 ZNF248Q8NDW4 579 aa18.6■□□□□ 0.57
CLK1-211ENST00000481641 ATL2Q8NHH9 583 aa18.6■□□□□ 0.57
CLK1-211ENST00000481641 CCL4L1Q8NHW4 92 aa18.6■□□□□ 0.57
CLK1-211ENST00000481641 PRR11Q96HE9 360 aaPredicted RBP18.6■□□□□ 0.57
CLK1-211ENST00000481641 COQ10AQ96MF6 247 aa18.6■□□□□ 0.57
CLK1-211ENST00000481641 RBM15Q96T37 977 aaKnown RBP eCLIP18.6■□□□□ 0.57
CLK1-211ENST00000481641 TMEM168Q9H0V1 697 aa18.6■□□□□ 0.57
CLK1-211ENST00000481641 SUDS3Q9H7L9 328 aaPredicted RBP18.6■□□□□ 0.57
CLK1-211ENST00000481641 LUC7L2Q9Y383 392 aaKnown RBP18.6■□□□□ 0.57
CLK1-211ENST00000481641 DGKBQ9Y6T7 804 aa18.6■□□□□ 0.57
CLK1-211ENST00000481641 GOLGA6L19H0YKK7 550 aa18.59■□□□□ 0.57
CLK1-211ENST00000481641 MYO1FO00160 1098 aa18.59■□□□□ 0.57
CLK1-211ENST00000481641 NTN3O00634 580 aaPredicted RBP18.59■□□□□ 0.57
CLK1-211ENST00000481641 TCEA3O75764 348 aa18.59■□□□□ 0.57
CLK1-211ENST00000481641 MAP3K6O95382 1288 aa18.59■□□□□ 0.57
CLK1-211ENST00000481641 CASP14P31944 242 aa18.59■□□□□ 0.57
CLK1-211ENST00000481641 VIPR1P32241 457 aa18.59■□□□□ 0.57
CLK1-211ENST00000481641 TRIM23P36406 574 aa18.59■□□□□ 0.57
CLK1-211ENST00000481641 HSPA9P38646 679 aaKnown RBP18.59■□□□□ 0.57
CLK1-211ENST00000481641 MMP13P45452 471 aa18.59■□□□□ 0.57
CLK1-211ENST00000481641 SPIDRQ14159 915 aa18.59■□□□□ 0.57
CLK1-211ENST00000481641 MARC1Q5VT66 337 aa18.59■□□□□ 0.57
CLK1-211ENST00000481641 HSD11B1LQ7Z5J1 315 aa18.59■□□□□ 0.57
CLK1-211ENST00000481641 TAF8Q7Z7C8 310 aa18.59■□□□□ 0.57
CLK1-211ENST00000481641 B3GNT8Q7Z7M8 397 aa18.59■□□□□ 0.57
CLK1-211ENST00000481641 SDR16C5Q8N3Y7 309 aa18.59■□□□□ 0.57
CLK1-211ENST00000481641 LRRN4Q8WUT4 740 aa18.59■□□□□ 0.57
CLK1-211ENST00000481641 NUS1Q96E22 293 aa18.59■□□□□ 0.57
CLK1-211ENST00000481641 SMIM14Q96QK8 99 aa18.59■□□□□ 0.57
CLK1-211ENST00000481641 WDR26Q9H7D7 661 aa18.59■□□□□ 0.57
CLK1-211ENST00000481641 CYP4F12Q9HCS2 524 aa18.59■□□□□ 0.57
CLK1-211ENST00000481641 NT5MQ9NPB1 228 aa18.59■□□□□ 0.57
CLK1-211ENST00000481641 ARHGEF17Q96PE2 2063 aaPredicted RBP18.58■□□□□ 0.57
CLK1-211ENST00000481641 NPIPB15A6NHN6 443 aaPredicted RBP18.58■□□□□ 0.56
CLK1-211ENST00000481641 MFSD11O43934 449 aa18.58■□□□□ 0.56
CLK1-211ENST00000481641 SOCS5O75159 536 aa18.58■□□□□ 0.56
CLK1-211ENST00000481641 HEXIM1O94992 359 aaKnown RBP18.58■□□□□ 0.56
CLK1-211ENST00000481641 PRB1P04280 392 aa18.58■□□□□ 0.56
CLK1-211ENST00000481641 CTPS1P17812 591 aa18.58■□□□□ 0.56
CLK1-211ENST00000481641 LHCGRP22888 699 aa18.58■□□□□ 0.56
CLK1-211ENST00000481641 SERPINB6P35237 376 aa18.58■□□□□ 0.56
CLK1-211ENST00000481641 ETV3P41162 512 aa18.58■□□□□ 0.56
CLK1-211ENST00000481641 ARSEP51690 589 aa18.58■□□□□ 0.56
CLK1-211ENST00000481641 ERVPABLB-1P60509 514 aa18.58■□□□□ 0.56
CLK1-211ENST00000481641 CXADRP78310 365 aa18.58■□□□□ 0.56
CLK1-211ENST00000481641 TSPAN33Q86UF1 283 aa18.58■□□□□ 0.56
CLK1-211ENST00000481641 BBS5Q8N3I7 341 aa18.58■□□□□ 0.56
CLK1-211ENST00000481641 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.58■□□□□ 0.56
CLK1-211ENST00000481641 Q8N9G6 341 aaPredicted RBP18.58■□□□□ 0.56
CLK1-211ENST00000481641 FAM46DQ8NEK8 389 aa18.58■□□□□ 0.56
CLK1-211ENST00000481641 ZNF564Q8TBZ8 553 aaPredicted RBP18.58■□□□□ 0.56
CLK1-211ENST00000481641 NSMCE1Q8WV22 266 aa18.58■□□□□ 0.56
CLK1-211ENST00000481641 SLC46A1Q96NT5 459 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms