RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-215ENST00000481116 DDX56Q9NY93 547 aaKnown RBP12.91□□□□□ -0.34
ABCF3-215ENST00000481116 NLGN3Q9NZ94 848 aa12.91□□□□□ -0.34
ABCF3-215ENST00000481116 SAE1Q9UBE0 346 aaPredicted RBP12.91□□□□□ -0.34
ABCF3-215ENST00000481116 APOBEC3BQ9UH17 382 aaKnown RBP12.91□□□□□ -0.34
ABCF3-215ENST00000481116 CHKBQ9Y259 395 aa12.91□□□□□ -0.34
ABCF3-215ENST00000481116 REXO2Q9Y3B8 237 aaKnown RBP12.91□□□□□ -0.34
ABCF3-215ENST00000481116 RP1P56715 2156 aa12.91□□□□□ -0.34
ABCF3-215ENST00000481116 COL27A1Q8IZC6 1860 aaPredicted RBP12.91□□□□□ -0.34
ABCF3-215ENST00000481116 CEP295Q9C0D2 2601 aa12.91□□□□□ -0.34
ABCF3-215ENST00000481116 ZFC3H1O60293 1989 aaKnown RBP12.9□□□□□ -0.34
ABCF3-215ENST00000481116 ASXL3Q9C0F0 2248 aa12.9□□□□□ -0.34
ABCF3-215ENST00000481116 ARHGEF17Q96PE2 2063 aaPredicted RBP12.9□□□□□ -0.34
ABCF3-215ENST00000481116 LY6G6EA0A0G2JKS1 128 aa12.9□□□□□ -0.34
ABCF3-215ENST00000481116 CFAP69A5D8W1 941 aa12.9□□□□□ -0.34
ABCF3-215ENST00000481116 ZNF487B1APH4 448 aa12.9□□□□□ -0.34
ABCF3-215ENST00000481116 H3BM21 787 aa12.9□□□□□ -0.34
ABCF3-215ENST00000481116 AQP9O43315 295 aa12.9□□□□□ -0.34
ABCF3-215ENST00000481116 FZD6O60353 706 aa12.9□□□□□ -0.34
ABCF3-215ENST00000481116 HEXIM1O94992 359 aaKnown RBP12.9□□□□□ -0.34
ABCF3-215ENST00000481116 MMP2P08253 660 aa12.9□□□□□ -0.34
ABCF3-215ENST00000481116 MX2P20592 715 aa12.9□□□□□ -0.34
ABCF3-215ENST00000481116 FECHP22830 423 aa12.9□□□□□ -0.34
ABCF3-215ENST00000481116 HNF1BP35680 557 aa12.9□□□□□ -0.34
ABCF3-215ENST00000481116 ETV3P41162 512 aa12.9□□□□□ -0.34
ABCF3-215ENST00000481116 CDKN2BP42772 138 aa12.9□□□□□ -0.34
ABCF3-215ENST00000481116 DAB2P98082 770 aa12.9□□□□□ -0.34
ABCF3-215ENST00000481116 ADCY2Q08462 1091 aa12.9□□□□□ -0.34
ABCF3-215ENST00000481116 NFATC4Q14934 902 aa12.9□□□□□ -0.34
ABCF3-215ENST00000481116 HS1BP3Q53T59 392 aa12.9□□□□□ -0.34
ABCF3-215ENST00000481116 PRRT3Q5FWE3 981 aa12.9□□□□□ -0.34
ABCF3-215ENST00000481116 RALGPS1Q5JS13 557 aa12.9□□□□□ -0.34
ABCF3-215ENST00000481116 ALG1LQ6GMV1 187 aa12.9□□□□□ -0.34
ABCF3-215ENST00000481116 RFLNAQ6ZTI6 216 aa12.9□□□□□ -0.34
ABCF3-215ENST00000481116 TMTC1Q8IUR5 882 aa12.9□□□□□ -0.34
ABCF3-215ENST00000481116 HID1Q8IV36 788 aa12.9□□□□□ -0.34
ABCF3-215ENST00000481116 CNTD1Q8N815 330 aa12.9□□□□□ -0.34
ABCF3-215ENST00000481116 TPCN2Q8NHX9 752 aa12.9□□□□□ -0.34
ABCF3-215ENST00000481116 APOLD1Q96LR9 279 aa12.9□□□□□ -0.34
ABCF3-215ENST00000481116 COQ10AQ96MF6 247 aa12.9□□□□□ -0.34
ABCF3-215ENST00000481116 ZNF830Q96NB3 372 aaPredicted RBP12.9□□□□□ -0.34
ABCF3-215ENST00000481116 LRRC61Q9BV99 259 aa12.9□□□□□ -0.34
ABCF3-215ENST00000481116 LGR4Q9BXB1 951 aa12.9□□□□□ -0.34
ABCF3-215ENST00000481116 SEPT10Q9P0V9 454 aa12.9□□□□□ -0.34
ABCF3-215ENST00000481116 U3KQA8 63 aa12.9□□□□□ -0.34
ABCF3-215ENST00000481116 A0A0A6YYK5 440 aaPredicted RBP12.89□□□□□ -0.35
ABCF3-215ENST00000481116 A0A0U1RQJ8 604 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 A0A1W2PQ67 120 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 NEMP2A6NFY4 417 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 TOR1BO14657 336 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 PSTPIP1O43586 416 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 PRLP01236 227 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 ALPPL2P10696 532 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 CYP2A6P11509 494 aaPredicted RBP12.89□□□□□ -0.35
ABCF3-215ENST00000481116 PECAM1P16284 738 aaPredicted RBP12.89□□□□□ -0.35
ABCF3-215ENST00000481116 TSHRP16473 764 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 ACP1P24666 158 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 CD86P42081 329 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 PEX5P50542 639 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 PPARDQ03181 441 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 MTM1Q13496 603 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 SMAD1Q15797 465 aaKnown RBP12.89□□□□□ -0.35
ABCF3-215ENST00000481116 ALG11Q2TAA5 492 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 PNCKQ6P2M8 343 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 CRTC1Q6UUV9 634 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 SPOCD1Q6ZMY3 1216 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 Q6ZVL8 140 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 DAAM2Q86T65 1068 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 VSIG1Q86XK7 387 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 TMEM139Q8IV31 216 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 CBARPQ8N350 705 aaPredicted RBP12.89□□□□□ -0.35
ABCF3-215ENST00000481116 SPOCK2Q92563 424 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 KRT35Q92764 455 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 FATE1Q969F0 183 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 HAUS1Q96CS2 278 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 NUS1Q96E22 293 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 SCRN2Q96FV2 425 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 OLFM3Q96PB7 478 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 IL12RB2Q99665 862 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 SLC13A1Q9BZW2 595 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 LACRTQ9GZZ8 138 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 MRPL40Q9NQ50 206 aaKnown RBP12.89□□□□□ -0.35
ABCF3-215ENST00000481116 SPASTQ9UBP0 616 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 CD84Q9UIB8 345 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 ZMIZ1Q9ULJ6 1067 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 PPIL1Q9Y3C6 166 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 PCDHGA1Q9Y5H4 931 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 SCN8AQ9UQD0 1980 aa12.89□□□□□ -0.35
ABCF3-215ENST00000481116 A0A0J9YYE9 177 aa12.88□□□□□ -0.35
ABCF3-215ENST00000481116 GOLGA6CA6NDK9 693 aa12.88□□□□□ -0.35
ABCF3-215ENST00000481116 GOLGA6BA6NDN3 693 aa12.88□□□□□ -0.35
ABCF3-215ENST00000481116 TMEM202A6NGA9 273 aa12.88□□□□□ -0.35
ABCF3-215ENST00000481116 CST8O60676 142 aa12.88□□□□□ -0.35
ABCF3-215ENST00000481116 KRT37O76014 449 aa12.88□□□□□ -0.35
ABCF3-215ENST00000481116 TRBC1P01850 177 aa12.88□□□□□ -0.35
ABCF3-215ENST00000481116 C1SP09871 688 aa12.88□□□□□ -0.35
ABCF3-215ENST00000481116 GOLGA6DP0CG33 693 aa12.88□□□□□ -0.35
ABCF3-215ENST00000481116 ZFXP17010 805 aaPredicted RBP12.88□□□□□ -0.35
ABCF3-215ENST00000481116 HK3P52790 923 aa12.88□□□□□ -0.35
ABCF3-215ENST00000481116 EPHB1P54762 984 aa12.88□□□□□ -0.35
ABCF3-215ENST00000481116 SRP54P61011 504 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms