RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 RTP4Q96DX8 246 aa17.4■□□□□ 0.38
HMGN1-212ENST00000479586 NCAPGQ9BPX3 1015 aa17.4■□□□□ 0.38
HMGN1-212ENST00000479586 MAGEB5Q9BZ81 275 aa17.4■□□□□ 0.38
HMGN1-212ENST00000479586 SPRY4Q9C004 299 aa17.4■□□□□ 0.38
HMGN1-212ENST00000479586 TMEM51Q9NW97 253 aa17.4■□□□□ 0.38
HMGN1-212ENST00000479586 OR12D3Q9UGF7 316 aa17.4■□□□□ 0.38
HMGN1-212ENST00000479586 AJAP1Q9UKB5 411 aaPredicted RBP17.4■□□□□ 0.38
HMGN1-212ENST00000479586 ZDHHC9Q9Y397 364 aa17.4■□□□□ 0.38
HMGN1-212ENST00000479586 PRRC2CQ9Y520 2896 aaKnown RBP17.4■□□□□ 0.38
HMGN1-212ENST00000479586 PRSS38A1L453 326 aa17.39■□□□□ 0.37
HMGN1-212ENST00000479586 RECQL5O94762 991 aaPredicted RBP17.39■□□□□ 0.37
HMGN1-212ENST00000479586 PNMA6AP0CW24 399 aaPredicted RBP17.39■□□□□ 0.37
HMGN1-212ENST00000479586 CCNB1P14635 433 aa17.39■□□□□ 0.37
HMGN1-212ENST00000479586 KELP23276 732 aa17.39■□□□□ 0.37
HMGN1-212ENST00000479586 SCNN1AP37088 669 aa17.39■□□□□ 0.37
HMGN1-212ENST00000479586 RAB15P59190 212 aa17.39■□□□□ 0.37
HMGN1-212ENST00000479586 PTK2Q05397 1052 aa17.39■□□□□ 0.37
HMGN1-212ENST00000479586 C2CD6Q53TS8 623 aa17.39■□□□□ 0.37
HMGN1-212ENST00000479586 ERAP2Q6P179 960 aa17.39■□□□□ 0.37
HMGN1-212ENST00000479586 ZSWIM9Q86XI8 627 aa17.39■□□□□ 0.37
HMGN1-212ENST00000479586 PELI3Q8N2H9 469 aa17.39■□□□□ 0.37
HMGN1-212ENST00000479586 NELFBQ8WX92 580 aa17.39■□□□□ 0.37
HMGN1-212ENST00000479586 CTRCQ99895 268 aa17.39■□□□□ 0.37
HMGN1-212ENST00000479586 GDPD2Q9HCC8 539 aa17.39■□□□□ 0.37
HMGN1-212ENST00000479586 TAAR2Q9P1P5 351 aa17.39■□□□□ 0.37
HMGN1-212ENST00000479586 LHX3Q9UBR4 397 aa17.39■□□□□ 0.37
HMGN1-212ENST00000479586 APEX2Q9UBZ4 518 aa17.39■□□□□ 0.37
HMGN1-212ENST00000479586 ATP8A1Q9Y2Q0 1164 aa17.39■□□□□ 0.37
HMGN1-212ENST00000479586 DOPEY1Q5JWR5 2465 aa17.39■□□□□ 0.37
HMGN1-212ENST00000479586 IGHV1OR21-1A0A087WYE8 117 aa17.38■□□□□ 0.37
HMGN1-212ENST00000479586 ZSCAN5CA6NGD5 496 aaPredicted RBP17.38■□□□□ 0.37
HMGN1-212ENST00000479586 GOLGA8SH3BPF8 625 aa17.38■□□□□ 0.37
HMGN1-212ENST00000479586 PPM1DO15297 605 aa17.38■□□□□ 0.37
HMGN1-212ENST00000479586 ZW10O43264 779 aa17.38■□□□□ 0.37
HMGN1-212ENST00000479586 SEMA7AO75326 666 aa17.38■□□□□ 0.37
HMGN1-212ENST00000479586 VPS4BO75351 444 aa17.38■□□□□ 0.37
HMGN1-212ENST00000479586 AK4P27144 223 aaPredicted RBP17.38■□□□□ 0.37
HMGN1-212ENST00000479586 MAP4P27816 1152 aaKnown RBP17.38■□□□□ 0.37
HMGN1-212ENST00000479586 CLCN1P35523 988 aa17.38■□□□□ 0.37
HMGN1-212ENST00000479586 GPR3P46089 330 aa17.38■□□□□ 0.37
HMGN1-212ENST00000479586 GABRB2P47870 512 aa17.38■□□□□ 0.37
HMGN1-212ENST00000479586 MARSP56192 900 aaKnown RBP17.38■□□□□ 0.37
HMGN1-212ENST00000479586 ATP11AP98196 1134 aa17.38■□□□□ 0.37
HMGN1-212ENST00000479586 NRG1Q02297 640 aaPredicted RBP17.38■□□□□ 0.37
HMGN1-212ENST00000479586 BIRC2Q13490 618 aa17.38■□□□□ 0.37
HMGN1-212ENST00000479586 ZNF787Q6DD87 383 aa17.38■□□□□ 0.37
HMGN1-212ENST00000479586 C18orf8Q96DM3 657 aa17.38■□□□□ 0.37
HMGN1-212ENST00000479586 FAM81BQ96LP2 452 aa17.38■□□□□ 0.37
HMGN1-212ENST00000479586 EFHD1Q9BUP0 239 aa17.38■□□□□ 0.37
HMGN1-212ENST00000479586 SUV39H2Q9H5I1 410 aa17.38■□□□□ 0.37
HMGN1-212ENST00000479586 NOL6Q9H6R4 1146 aaKnown RBP17.38■□□□□ 0.37
HMGN1-212ENST00000479586 WDR26Q9H7D7 661 aa17.38■□□□□ 0.37
HMGN1-212ENST00000479586 CARS2Q9HA77 564 aaKnown RBP17.38■□□□□ 0.37
HMGN1-212ENST00000479586 TMEM59LQ9UK28 342 aa17.38■□□□□ 0.37
HMGN1-212ENST00000479586 VPS4AQ9UN37 437 aa17.38■□□□□ 0.37
HMGN1-212ENST00000479586 CTNND2Q9UQB3 1225 aa17.38■□□□□ 0.37
HMGN1-212ENST00000479586 MRPS18BQ9Y676 258 aaKnown RBP17.38■□□□□ 0.37
HMGN1-212ENST00000479586 KCNMB2Q9Y691 235 aa17.38■□□□□ 0.37
HMGN1-212ENST00000479586 CSMD1Q96PZ7 3565 aa17.38■□□□□ 0.37
HMGN1-212ENST00000479586 LRIG2O94898 1065 aa17.37■□□□□ 0.37
HMGN1-212ENST00000479586 HOXC4P09017 264 aaPredicted RBP17.37■□□□□ 0.37
HMGN1-212ENST00000479586 TCN2P20062 427 aa17.37■□□□□ 0.37
HMGN1-212ENST00000479586 BMP6P22004 513 aa17.37■□□□□ 0.37
HMGN1-212ENST00000479586 ADRA1BP35368 520 aa17.37■□□□□ 0.37
HMGN1-212ENST00000479586 TRIM23P36406 574 aa17.37■□□□□ 0.37
HMGN1-212ENST00000479586 STAT1P42224 750 aa17.37■□□□□ 0.37
HMGN1-212ENST00000479586 RALGDSQ12967 914 aa17.37■□□□□ 0.37
HMGN1-212ENST00000479586 INO80DQ53TQ3 878 aaPredicted RBP17.37■□□□□ 0.37
HMGN1-212ENST00000479586 HSCBQ8IWL3 235 aa17.37■□□□□ 0.37
HMGN1-212ENST00000479586 EMC1Q8N766 993 aa17.37■□□□□ 0.37
HMGN1-212ENST00000479586 TMEM35BQ8NCS4 154 aa17.37■□□□□ 0.37
HMGN1-212ENST00000479586 HCAR2Q8TDS4 363 aa17.37■□□□□ 0.37
HMGN1-212ENST00000479586 CASKIN2Q8WXE0 1202 aa17.37■□□□□ 0.37
HMGN1-212ENST00000479586 TBC1D31Q96DN5 1066 aa17.37■□□□□ 0.37
HMGN1-212ENST00000479586 TEFMQ96QE5 360 aaKnown RBP17.37■□□□□ 0.37
HMGN1-212ENST00000479586 GSDMCQ9BYG8 508 aa17.37■□□□□ 0.37
HMGN1-212ENST00000479586 RETREG1Q9H6L5 497 aa17.37■□□□□ 0.37
HMGN1-212ENST00000479586 PRDM8Q9NQV8 689 aa17.37■□□□□ 0.37
HMGN1-212ENST00000479586 MAN1B1Q9UKM7 699 aa17.37■□□□□ 0.37
HMGN1-212ENST00000479586 TEX33O43247 280 aa17.36■□□□□ 0.37
HMGN1-212ENST00000479586 BUB1BO60566 1050 aaPredicted RBP17.36■□□□□ 0.37
HMGN1-212ENST00000479586 GNA14O95837 355 aa17.36■□□□□ 0.37
HMGN1-212ENST00000479586 FUCA1P04066 466 aa17.36■□□□□ 0.37
HMGN1-212ENST00000479586 GM2AP17900 193 aa17.36■□□□□ 0.37
HMGN1-212ENST00000479586 STX17P56962 302 aa17.36■□□□□ 0.37
HMGN1-212ENST00000479586 MC1RQ01726 317 aa17.36■□□□□ 0.37
HMGN1-212ENST00000479586 ABHD18Q0P651 414 aa17.36■□□□□ 0.37
HMGN1-212ENST00000479586 ILF3Q12906 894 aaKnown RBP eCLIP17.36■□□□□ 0.37
HMGN1-212ENST00000479586 SQSTM1Q13501 440 aa17.36■□□□□ 0.37
HMGN1-212ENST00000479586 CYTH1Q15438 398 aa17.36■□□□□ 0.37
HMGN1-212ENST00000479586 TSR1Q2NL82 804 aaKnown RBP17.36■□□□□ 0.37
HMGN1-212ENST00000479586 CFAP58Q5T655 872 aa17.36■□□□□ 0.37
HMGN1-212ENST00000479586 TCTN3Q6NUS6 607 aa17.36■□□□□ 0.37
HMGN1-212ENST00000479586 SLC30A9Q6PML9 568 aa17.36■□□□□ 0.37
HMGN1-212ENST00000479586 ASB18Q6ZVZ8 466 aa17.36■□□□□ 0.37
HMGN1-212ENST00000479586 KDELC2Q7Z4H8 507 aa17.36■□□□□ 0.37
HMGN1-212ENST00000479586 CAMK1DQ8IU85 385 aa17.36■□□□□ 0.37
HMGN1-212ENST00000479586 NAGSQ8N159 534 aa17.36■□□□□ 0.37
HMGN1-212ENST00000479586 GALNT11Q8NCW6 608 aa17.36■□□□□ 0.37
HMGN1-212ENST00000479586 PTCD2Q8WV60 388 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms