RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 A0A1W2PQ67 120 aa14.39□□□□□ -0.11
ATG4B-218ENST00000479554 CACNB4O00305 520 aaPredicted RBP14.39□□□□□ -0.11
ATG4B-218ENST00000479554 TRAFD1O14545 582 aaPredicted RBP14.39□□□□□ -0.11
ATG4B-218ENST00000479554 SOCS5O75159 536 aa14.39□□□□□ -0.11
ATG4B-218ENST00000479554 CPP00450 1065 aa14.39□□□□□ -0.11
ATG4B-218ENST00000479554 FECHP22830 423 aa14.39□□□□□ -0.11
ATG4B-218ENST00000479554 HSPA9P38646 679 aaKnown RBP14.39□□□□□ -0.11
ATG4B-218ENST00000479554 SLC25A11Q02978 314 aaKnown RBP14.39□□□□□ -0.11
ATG4B-218ENST00000479554 KRT81Q14533 505 aa14.39□□□□□ -0.11
ATG4B-218ENST00000479554 ISXQ2M1V0 245 aa14.39□□□□□ -0.11
ATG4B-218ENST00000479554 TSR1Q2NL82 804 aaKnown RBP14.39□□□□□ -0.11
ATG4B-218ENST00000479554 TXNRD3NBQ6F5E7 133 aa14.39□□□□□ -0.11
ATG4B-218ENST00000479554 LVRNQ6Q4G3 990 aa14.39□□□□□ -0.11
ATG4B-218ENST00000479554 LIPIQ6XZB0 460 aa14.39□□□□□ -0.11
ATG4B-218ENST00000479554 RBM44Q6ZP01 1051 aaKnown RBP14.39□□□□□ -0.11
ATG4B-218ENST00000479554 GKN2Q86XP6 184 aa14.39□□□□□ -0.11
ATG4B-218ENST00000479554 TMEM139Q8IV31 216 aa14.39□□□□□ -0.11
ATG4B-218ENST00000479554 LSMEM2Q8N112 164 aa14.39□□□□□ -0.11
ATG4B-218ENST00000479554 ARL10Q8N8L6 244 aa14.39□□□□□ -0.11
ATG4B-218ENST00000479554 PLA2G15Q8NCC3 412 aa14.39□□□□□ -0.11
ATG4B-218ENST00000479554 PCDH19Q8TAB3 1148 aa14.39□□□□□ -0.11
ATG4B-218ENST00000479554 WDR48Q8TAF3 677 aa14.39□□□□□ -0.11
ATG4B-218ENST00000479554 NSMCE1Q8WV22 266 aa14.39□□□□□ -0.11
ATG4B-218ENST00000479554 PDXPQ96GD0 296 aa14.39□□□□□ -0.11
ATG4B-218ENST00000479554 CCDC3Q9BQI4 270 aa14.39□□□□□ -0.11
ATG4B-218ENST00000479554 SYNDIG1Q9H7V2 258 aa14.39□□□□□ -0.11
ATG4B-218ENST00000479554 POLR1BQ9H9Y6 1135 aa14.39□□□□□ -0.11
ATG4B-218ENST00000479554 PCDH18Q9HCL0 1135 aa14.39□□□□□ -0.11
ATG4B-218ENST00000479554 ABHD10Q9NUJ1 306 aa14.39□□□□□ -0.11
ATG4B-218ENST00000479554 SIRPGQ9P1W8 387 aa14.39□□□□□ -0.11
ATG4B-218ENST00000479554 B4GALT6Q9UBX8 382 aa14.39□□□□□ -0.11
ATG4B-218ENST00000479554 PADI4Q9UM07 663 aa14.39□□□□□ -0.11
ATG4B-218ENST00000479554 BPTFQ12830 3046 aa14.39□□□□□ -0.11
ATG4B-218ENST00000479554 COL27A1Q8IZC6 1860 aaPredicted RBP14.38□□□□□ -0.11
ATG4B-218ENST00000479554 A0A087X0T9 212 aa14.38□□□□□ -0.11
ATG4B-218ENST00000479554 TTC24A2A3L6 582 aaPredicted RBP14.38□□□□□ -0.11
ATG4B-218ENST00000479554 A8MX80 341 aa14.38□□□□□ -0.11
ATG4B-218ENST00000479554 TCEA3O75764 348 aa14.38□□□□□ -0.11
ATG4B-218ENST00000479554 PEX11BO96011 259 aa14.38□□□□□ -0.11
ATG4B-218ENST00000479554 TNFP01375 233 aa14.38□□□□□ -0.11
ATG4B-218ENST00000479554 CYP1A2P05177 515 aa14.38□□□□□ -0.11
ATG4B-218ENST00000479554 FAM228BP0C875 321 aa14.38□□□□□ -0.11
ATG4B-218ENST00000479554 KELP23276 732 aa14.38□□□□□ -0.11
ATG4B-218ENST00000479554 NFKBIAP25963 317 aa14.38□□□□□ -0.11
ATG4B-218ENST00000479554 SSR1P43307 286 aaKnown RBP14.38□□□□□ -0.11
ATG4B-218ENST00000479554 LSSP48449 732 aa14.38□□□□□ -0.11
ATG4B-218ENST00000479554 PCBP4P57723 403 aaKnown RBP14.38□□□□□ -0.11
ATG4B-218ENST00000479554 KIAA1024LP59773 190 aa14.38□□□□□ -0.11
ATG4B-218ENST00000479554 ACOX1Q15067 660 aa14.38□□□□□ -0.11
ATG4B-218ENST00000479554 SOWAHCQ53LP3 525 aaPredicted RBP14.38□□□□□ -0.11
ATG4B-218ENST00000479554 C3orf38Q5JPI3 329 aa14.38□□□□□ -0.11
ATG4B-218ENST00000479554 TMTC1Q8IUR5 882 aa14.38□□□□□ -0.11
ATG4B-218ENST00000479554 C17orf53Q8N3J3 647 aaPredicted RBP14.38□□□□□ -0.11
ATG4B-218ENST00000479554 SDR16C5Q8N3Y7 309 aa14.38□□□□□ -0.11
ATG4B-218ENST00000479554 KYQ8NBH2 561 aa14.38□□□□□ -0.11
ATG4B-218ENST00000479554 ZNF248Q8NDW4 579 aa14.38□□□□□ -0.11
ATG4B-218ENST00000479554 OR8K1Q8NGG5 319 aa14.38□□□□□ -0.11
ATG4B-218ENST00000479554 PDCD6IPQ8WUM4 868 aaKnown RBP14.38□□□□□ -0.11
ATG4B-218ENST00000479554 SPOCK2Q92563 424 aa14.38□□□□□ -0.11
ATG4B-218ENST00000479554 FUBP1Q96AE4 644 aaKnown RBP14.38□□□□□ -0.11
ATG4B-218ENST00000479554 GRAMD1AQ96CP6 724 aa14.38□□□□□ -0.11
ATG4B-218ENST00000479554 NSMCE3Q96MG7 304 aa14.38□□□□□ -0.11
ATG4B-218ENST00000479554 ZNF578Q96N58 590 aaPredicted RBP14.38□□□□□ -0.11
ATG4B-218ENST00000479554 NUDCD1Q96RS6 583 aa14.38□□□□□ -0.11
ATG4B-218ENST00000479554 LGMNQ99538 433 aa14.38□□□□□ -0.11
ATG4B-218ENST00000479554 MGME1Q9BQP7 344 aa14.38□□□□□ -0.11
ATG4B-218ENST00000479554 GULP1Q9UBP9 304 aa14.38□□□□□ -0.11
ATG4B-218ENST00000479554 GPR34Q9UPC5 381 aa14.38□□□□□ -0.11
ATG4B-218ENST00000479554 PCDHGC4Q9Y5F7 938 aa14.38□□□□□ -0.11
ATG4B-218ENST00000479554 ATRXP46100 2492 aa14.38□□□□□ -0.11
ATG4B-218ENST00000479554 MYO1FO00160 1098 aa14.37□□□□□ -0.11
ATG4B-218ENST00000479554 HTRA2O43464 458 aaPredicted RBP14.37□□□□□ -0.11
ATG4B-218ENST00000479554 MAFKO60675 156 aa14.37□□□□□ -0.11
ATG4B-218ENST00000479554 DXOO77932 396 aaKnown RBP14.37□□□□□ -0.11
ATG4B-218ENST00000479554 CR2P20023 1033 aa14.37□□□□□ -0.11
ATG4B-218ENST00000479554 MMP13P45452 471 aa14.37□□□□□ -0.11
ATG4B-218ENST00000479554 CDH6P55285 790 aa14.37□□□□□ -0.11
ATG4B-218ENST00000479554 COL9A2Q14055 689 aaPredicted RBP14.37□□□□□ -0.11
ATG4B-218ENST00000479554 HADHQ16836 314 aaKnown RBP14.37□□□□□ -0.11
ATG4B-218ENST00000479554 CCDC122Q5T0U0 273 aa14.37□□□□□ -0.11
ATG4B-218ENST00000479554 MARC1Q5VT66 337 aa14.37□□□□□ -0.11
ATG4B-218ENST00000479554 ALKBH5Q6P6C2 394 aaKnown RBP14.37□□□□□ -0.11
ATG4B-218ENST00000479554 NYAP1Q6ZVC0 841 aa14.37□□□□□ -0.11
ATG4B-218ENST00000479554 PGBD5Q8N414 524 aa14.37□□□□□ -0.11
ATG4B-218ENST00000479554 OR56A4Q8NGH8 313 aa14.37□□□□□ -0.11
ATG4B-218ENST00000479554 ZNF564Q8TBZ8 553 aaPredicted RBP14.37□□□□□ -0.11
ATG4B-218ENST00000479554 OR1E3Q8WZA6 343 aa14.37□□□□□ -0.11
ATG4B-218ENST00000479554 NUS1Q96E22 293 aa14.37□□□□□ -0.11
ATG4B-218ENST00000479554 ATXN7L3BQ96GX2 97 aa14.37□□□□□ -0.11
ATG4B-218ENST00000479554 RBM15Q96T37 977 aaKnown RBP eCLIP14.37□□□□□ -0.11
ATG4B-218ENST00000479554 DNAJC7Q99615 494 aa14.37□□□□□ -0.11
ATG4B-218ENST00000479554 WDR26Q9H7D7 661 aa14.37□□□□□ -0.11
ATG4B-218ENST00000479554 NOD2Q9HC29 1040 aa14.37□□□□□ -0.11
ATG4B-218ENST00000479554 FGF22Q9HCT0 170 aa14.37□□□□□ -0.11
ATG4B-218ENST00000479554 RCOR3Q9P2K3 495 aaPredicted RBP14.37□□□□□ -0.11
ATG4B-218ENST00000479554 SATB2Q9UPW6 733 aa14.37□□□□□ -0.11
ATG4B-218ENST00000479554 ENTPD2Q9Y5L3 495 aa14.37□□□□□ -0.11
ATG4B-218ENST00000479554 DGKBQ9Y6T7 804 aa14.37□□□□□ -0.11
ATG4B-218ENST00000479554 TMEM202A6NGA9 273 aa14.36□□□□□ -0.11
ATG4B-218ENST00000479554 GM2AP17900 193 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms