RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 TRAF6Q9Y4K3 522 aa14.38□□□□□ -0.11
COL20A1-206ENST00000479501 GNG14A0A1W2PPG7 69 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 DPPA5A6NC42 116 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 AZIN1O14977 448 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 IRAK2O43187 625 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 MLYCDO95822 493 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 IL5RAQ01344 420 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 SIX1Q15475 284 aaPredicted RBP14.37□□□□□ -0.11
COL20A1-206ENST00000479501 CEP78Q5JTW2 689 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 VWA5B1Q5TIE3 1220 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 HECTD2Q5U5R9 776 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 HJURPQ8NCD3 748 aaPredicted RBP14.37□□□□□ -0.11
COL20A1-206ENST00000479501 PIWIL1Q96J94 861 aaKnown RBP14.37□□□□□ -0.11
COL20A1-206ENST00000479501 TBATAQ96M53 351 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 TRMT13Q9NUP7 481 aaKnown RBP14.37□□□□□ -0.11
COL20A1-206ENST00000479501 KAT6AQ92794 2004 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 ASNA1O43681 348 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 TTKP33981 857 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 POLD2P49005 469 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 GOLGA4Q13439 2230 aaKnown RBP14.37□□□□□ -0.11
COL20A1-206ENST00000479501 USP45Q70EL2 814 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 TTC7BQ86TV6 843 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 OR8H2Q8N162 312 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 FBXW8Q8N3Y1 598 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 C10orf82Q8WW14 230 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 SLC39A8Q9C0K1 460 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 COMMD8Q9NX08 183 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 ATXN10Q9UBB4 475 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 PRPF19Q9UMS4 504 aaKnown RBP14.37□□□□□ -0.11
COL20A1-206ENST00000479501 AK5Q9Y6K8 562 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 PTGES3LE9PB15 166 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 TK2O00142 265 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 SYN3O14994 580 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 TM7SF2O76062 418 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 IPO13O94829 963 aaKnown RBP14.37□□□□□ -0.11
COL20A1-206ENST00000479501 NDST3O95803 873 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 RAB14P61106 215 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 CRY1Q16526 586 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 FAM98BQ52LJ0 330 aaKnown RBP14.37□□□□□ -0.11
COL20A1-206ENST00000479501 CUZD1Q86UP6 607 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 STK32CQ86UX6 486 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 UNC5BQ8IZJ1 945 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 VPS33AQ96AX1 596 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 DGCR14Q96DF8 476 aaKnown RBP14.37□□□□□ -0.11
COL20A1-206ENST00000479501 RHOBTB2Q9BYZ6 727 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 SLC12A4Q9UP95 1085 aa14.37□□□□□ -0.11
COL20A1-206ENST00000479501 CPSF4O95639 269 aaKnown RBP14.36□□□□□ -0.11
COL20A1-206ENST00000479501 EOMESO95936 686 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 GSNP06396 782 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 TACR2P21452 398 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 PIK3CGP48736 1102 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 SNRPD1P62314 119 aaKnown RBP14.36□□□□□ -0.11
COL20A1-206ENST00000479501 HSPA14Q0VDF9 509 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 DLG2Q15700 870 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 ARMCX4Q5H9R4 360 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 KBTBD2Q8IY47 623 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 OSCP1Q8WVF1 389 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 ROGDIQ9GZN7 287 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 HMG20AQ9NP66 347 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 RGS14O43566 566 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 VAV1P15498 845 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 PPM1LQ5SGD2 360 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 RFWD3Q6PCD5 774 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 AAGABQ6PD74 315 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 PLEKHM3Q6ZWE6 761 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 LDB1Q86U70 411 aaPredicted RBP14.36□□□□□ -0.11
COL20A1-206ENST00000479501 CDYL2Q8N8U2 506 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 OR4K2Q8NGD2 314 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 FIG4Q92562 907 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 RNF145Q96MT1 663 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 HAPLN3Q96S86 360 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 ATP13A3Q9H7F0 1226 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 SPAG4Q9NPE6 437 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 ARHGEF3Q9NR81 526 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 STMN3Q9NZ72 180 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 KLQ9UEF7 1012 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 CYTH4Q9UIA0 394 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 BTRCQ9Y297 605 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 COL16A1Q07092 1604 aaPredicted RBP14.36□□□□□ -0.11
COL20A1-206ENST00000479501 TRIM38O00635 465 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 WBP4O75554 376 aaKnown RBP14.36□□□□□ -0.11
COL20A1-206ENST00000479501 ZNF682O95780 498 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 CRHR2Q13324 411 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 CAMK2GQ13555 558 aaPredicted RBP14.36□□□□□ -0.11
COL20A1-206ENST00000479501 ARMC4Q5T2S8 1044 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 FUT10Q6P4F1 479 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 SCIMPQ6UWF3 145 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 DENND6AQ8IWF6 608 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 RORBQ92753 470 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 PLEKHA8Q96JA3 519 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 CLPTM1LQ96KA5 538 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 NPY6RQ99463 290 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 HERPUD2Q9BSE4 406 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 C9orf16Q9BUW7 83 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 GALNT8Q9NY28 637 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 MTF2Q9Y483 593 aaPredicted RBP14.36□□□□□ -0.11
COL20A1-206ENST00000479501 PIRO00625 290 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 TRIM24O15164 1050 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 CA12O43570 354 aa14.36□□□□□ -0.11
COL20A1-206ENST00000479501 PARNO95453 639 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms