RNA–Protein interactions for RNA: ENST00000479485.5

SSR1-207, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 2

Gene SSR1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-207ENST00000479485 ZNF778Q96MU6 729 aa4.78□□□□□ -1.64
SSR1-207ENST00000479485 GDAP1L1Q96MZ0 367 aa4.78□□□□□ -1.64
SSR1-207ENST00000479485 NAP1L3Q99457 506 aaPredicted RBP4.78□□□□□ -1.64
SSR1-207ENST00000479485 SDF4Q9BRK5 362 aa4.78□□□□□ -1.64
SSR1-207ENST00000479485 LLPHQ9BRT6 129 aaKnown RBP4.78□□□□□ -1.64
SSR1-207ENST00000479485 IFT27Q9BW83 186 aa4.78□□□□□ -1.64
SSR1-207ENST00000479485 CADM1Q9BY67 442 aaKnown RBP4.78□□□□□ -1.64
SSR1-207ENST00000479485 SLC29A3Q9BZD2 475 aa4.78□□□□□ -1.64
SSR1-207ENST00000479485 TRIM4Q9C037 500 aa4.78□□□□□ -1.64
SSR1-207ENST00000479485 VCXQ9H320 206 aa4.78□□□□□ -1.64
SSR1-207ENST00000479485 VCX3BQ9H321 246 aa4.78□□□□□ -1.64
SSR1-207ENST00000479485 VCX3AQ9NNX9 186 aa4.78□□□□□ -1.64
SSR1-207ENST00000479485 HYPKQ9NX55 129 aa4.78□□□□□ -1.64
SSR1-207ENST00000479485 UTP6Q9NYH9 597 aaKnown RBP4.78□□□□□ -1.64
SSR1-207ENST00000479485 HDAC6Q9UBN7 1215 aa4.78□□□□□ -1.64
SSR1-207ENST00000479485 HEY2Q9UBP5 337 aa4.78□□□□□ -1.64
SSR1-207ENST00000479485 CTNNAL1Q9UBT7 734 aa4.78□□□□□ -1.64
SSR1-207ENST00000479485 CIDEBQ9UHD4 219 aa4.78□□□□□ -1.64
SSR1-207ENST00000479485 CD207Q9UJ71 328 aa4.78□□□□□ -1.64
SSR1-207ENST00000479485 GTF2A1LQ9UNN4 478 aa4.78□□□□□ -1.64
SSR1-207ENST00000479485 WDR37Q9Y2I8 494 aa4.78□□□□□ -1.64
SSR1-207ENST00000479485 C15orf41Q9Y2V0 281 aa4.78□□□□□ -1.64
SSR1-207ENST00000479485 ABCA6Q8N139 1617 aa4.78□□□□□ -1.64
SSR1-207ENST00000479485 MYO3AQ8NEV4 1616 aa4.78□□□□□ -1.64
SSR1-207ENST00000479485 RAPGEF6Q8TEU7 1601 aa4.78□□□□□ -1.64
SSR1-207ENST00000479485 MAST1Q9Y2H9 1570 aa4.78□□□□□ -1.64
SSR1-207ENST00000479485 URB2Q14146 1524 aaKnown RBP4.77□□□□□ -1.65
SSR1-207ENST00000479485 LMTK2Q8IWU2 1503 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 COL3A1P02461 1466 aaPredicted RBP4.77□□□□□ -1.65
SSR1-207ENST00000479485 CDK12Q9NYV4 1490 aaPredicted RBP4.77□□□□□ -1.65
SSR1-207ENST00000479485 A6NNC1 897 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 B4DLN1 442 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 PRPF4O43172 522 aaKnown RBP eCLIP4.77□□□□□ -1.65
SSR1-207ENST00000479485 TLX3O43711 291 aaPredicted RBP4.77□□□□□ -1.65
SSR1-207ENST00000479485 HBP1O60381 514 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 N4BP1O75113 896 aaKnown RBP4.77□□□□□ -1.65
SSR1-207ENST00000479485 SMIM24O75264 130 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 PENKP01210 267 aaPredicted RBP4.77□□□□□ -1.65
SSR1-207ENST00000479485 HLA-DQA2P01906 255 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 PYGLP06737 847 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 GSTA2P09210 222 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 FCGR2AP12318 317 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 PRF1P14222 555 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 CD72P21854 359 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 ALDH3A1P30838 453 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 RANBP1P43487 201 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 ZNF81P51508 661 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 VSNL1P62760 191 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 MYL5Q02045 173 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 GAD2Q05329 585 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 TAF7Q15545 349 aaPredicted RBP4.77□□□□□ -1.65
SSR1-207ENST00000479485 CCDC92Q53HC0 331 aaPredicted RBP4.77□□□□□ -1.65
SSR1-207ENST00000479485 ENTPD8Q5MY95 495 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 TTC39AQ5SRH9 613 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 C6orf10Q5SRN2 563 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 PXDC1Q5TGL8 231 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 ASPHD1Q5U4P2 390 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 SPECC1LQ69YQ0 1117 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 KLHL10Q6JEL2 608 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 KDM7AQ6ZMT4 941 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 CCDC80Q76M96 950 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 RUFY3Q7L099 469 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 BZW1Q7L1Q6 419 aaKnown RBP4.77□□□□□ -1.65
SSR1-207ENST00000479485 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.77□□□□□ -1.65
SSR1-207ENST00000479485 PIP4P1Q86T03 277 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 LCA5Q86VQ0 697 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 SLC44A5Q8NCS7 719 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 RASSF8Q8NHQ8 419 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 KCNG4Q8TDN1 519 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.77□□□□□ -1.65
SSR1-207ENST00000479485 NCSTNQ92542 709 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 MAELQ96JY0 434 aaKnown RBP4.77□□□□□ -1.65
SSR1-207ENST00000479485 FRG2BQ96QU4 278 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 PLEKHF1Q96S99 279 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 CCDC28BQ9BUN5 200 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 MROH8Q9H579 483 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 SPAG4Q9NPE6 437 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 TMEM160Q9NX00 188 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 HMG20BQ9P0W2 317 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 RCOR1Q9UKL0 485 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 GJD2Q9UKL4 321 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 TMCO1Q9UM00 188 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 COG5Q9UP83 839 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 PTPRTO14522 1441 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 ZFYVE9O95405 1425 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 CPSF1Q10570 1443 aaKnown RBP4.77□□□□□ -1.65
SSR1-207ENST00000479485 ATP10DQ9P241 1426 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 SPHKAPQ2M3C7 1700 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 ARHGEF10O15013 1369 aa4.77□□□□□ -1.65
SSR1-207ENST00000479485 CHD2O14647 1828 aaKnown RBP4.76□□□□□ -1.65
SSR1-207ENST00000479485 NUP153P49790 1475 aaKnown RBP4.76□□□□□ -1.65
SSR1-207ENST00000479485 A0A0A0MQY5 61 aa4.76□□□□□ -1.65
SSR1-207ENST00000479485 LRRIQ3A6PVS8 624 aaPredicted RBP4.76□□□□□ -1.65
SSR1-207ENST00000479485 HMGB1P1B2RPK0 211 aaPredicted RBP4.76□□□□□ -1.65
SSR1-207ENST00000479485 ANKRD65E5RJM6 399 aa4.76□□□□□ -1.65
SSR1-207ENST00000479485 CHRNB1P11230 501 aa4.76□□□□□ -1.65
SSR1-207ENST00000479485 TNFRSF8P28908 595 aa4.76□□□□□ -1.65
SSR1-207ENST00000479485 GJC1P36383 396 aa4.76□□□□□ -1.65
SSR1-207ENST00000479485 PTPN9P43378 593 aa4.76□□□□□ -1.65
SSR1-207ENST00000479485 MTNR1AP48039 350 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms