RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 FAM193AP78312 1265 aa11.5□□□□□ -0.57
CBWD3-206ENST00000478048 SLC1A5Q15758 541 aa11.5□□□□□ -0.57
CBWD3-206ENST00000478048 SIRPB2Q5JXA9 342 aa11.5□□□□□ -0.57
CBWD3-206ENST00000478048 TBC1D3GQ6DHY5 549 aa11.5□□□□□ -0.57
CBWD3-206ENST00000478048 DESI1Q6ICB0 168 aa11.5□□□□□ -0.57
CBWD3-206ENST00000478048 TBC1D3CQ6IPX1 549 aa11.5□□□□□ -0.57
CBWD3-206ENST00000478048 DENND5AQ6IQ26 1287 aa11.5□□□□□ -0.57
CBWD3-206ENST00000478048 RANBP10Q6VN20 620 aa11.5□□□□□ -0.57
CBWD3-206ENST00000478048 TSPAN33Q86UF1 283 aa11.5□□□□□ -0.57
CBWD3-206ENST00000478048 TBC1D3Q8IZP1 549 aaPredicted RBP11.5□□□□□ -0.57
CBWD3-206ENST00000478048 NOA1Q8NC60 698 aaKnown RBP11.5□□□□□ -0.57
CBWD3-206ENST00000478048 GAB3Q8WWW8 586 aa11.5□□□□□ -0.57
CBWD3-206ENST00000478048 SCRN2Q96FV2 425 aa11.5□□□□□ -0.57
CBWD3-206ENST00000478048 SPACA7Q96KW9 195 aa11.5□□□□□ -0.57
CBWD3-206ENST00000478048 RUNDC3BQ96NL0 473 aa11.5□□□□□ -0.57
CBWD3-206ENST00000478048 FSD1LQ9BXM9 530 aa11.5□□□□□ -0.57
CBWD3-206ENST00000478048 SGK2Q9HBY8 427 aa11.5□□□□□ -0.57
CBWD3-206ENST00000478048 PIH1D1Q9NWS0 290 aaKnown RBP11.5□□□□□ -0.57
CBWD3-206ENST00000478048 B4GALT6Q9UBX8 382 aa11.5□□□□□ -0.57
CBWD3-206ENST00000478048 ASIC3Q9UHC3 531 aa11.5□□□□□ -0.57
CBWD3-206ENST00000478048 R4GN57 208 aa11.5□□□□□ -0.57
CBWD3-206ENST00000478048 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.49□□□□□ -0.57
CBWD3-206ENST00000478048 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 CTAGE15A4D2H0 777 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 NPIPB15A6NHN6 443 aaPredicted RBP11.49□□□□□ -0.57
CBWD3-206ENST00000478048 E7EVH7 732 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 LILRB5O75023 590 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 PCDH8O95206 1070 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 EPOP01588 193 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 APRTP07741 180 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 CTAGE8P0CG41 777 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 LHCGRP22888 699 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 IVDP26440 423 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 OXTRP30559 389 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 HNF1BP35680 557 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 MMP12P39900 470 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 GRIA4P48058 902 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 PPP2CBP62714 309 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 PPP2CAP67775 309 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 SFSWAPQ12872 951 aaKnown RBP11.49□□□□□ -0.57
CBWD3-206ENST00000478048 RALGDSQ12967 914 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 DHX34Q14147 1143 aaKnown RBP11.49□□□□□ -0.57
CBWD3-206ENST00000478048 ANKRD22Q5VYY1 191 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 C4orf22Q6V702 233 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 CTAGE6Q86UF2 777 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 CTAGE4Q8IX94 777 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 TMEFF1Q8IYR6 380 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 LRRN4CLQ8ND94 238 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 CPT1BQ92523 772 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 RAB7BQ96AH8 199 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 MCCC1Q96RQ3 725 aaPredicted RBP11.49□□□□□ -0.57
CBWD3-206ENST00000478048 TBL1YQ9BQ87 522 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 HINFPQ9BQA5 517 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 WRAP53Q9BUR4 548 aaKnown RBP11.49□□□□□ -0.57
CBWD3-206ENST00000478048 ADGRE3Q9BY15 652 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 TRIM31Q9BZY9 425 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 LRRC40Q9H9A6 602 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 L2HGDHQ9H9P8 463 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 ZFR2Q9UPR6 939 aaKnown RBP11.49□□□□□ -0.57
CBWD3-206ENST00000478048 PCDHGA2Q9Y5H1 932 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 GPR179Q6PRD1 2367 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 GOLGA6CA6NDK9 693 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 GOLGA6BA6NDN3 693 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 C10orf142B7Z368 130 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 NEMP1O14524 444 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 AP1G1O43747 822 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 MMP20O60882 483 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 GOLGA6DP0CG33 693 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 MAT2AP31153 395 aaKnown RBP11.49□□□□□ -0.57
CBWD3-206ENST00000478048 ADCY8P40145 1251 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 LMAN1P49257 510 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 RPL26P61254 145 aaKnown RBP11.49□□□□□ -0.57
CBWD3-206ENST00000478048 RPL6Q02878 288 aaKnown RBP11.49□□□□□ -0.57
CBWD3-206ENST00000478048 CCDC15Q0P6D6 951 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 ELP6Q0PNE2 266 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 KCNJ11Q14654 390 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 SEL1L3Q68CR1 1132 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 ERAP2Q6P179 960 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 CRTC1Q6UUV9 634 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 MNS1Q8NEH6 495 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 OR52K1Q8NGK4 314 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 OR2T34Q8NGX1 318 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 PRR7Q8TB68 274 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 KLK6Q92876 244 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 PPP1R2P1Q96PQ5 205 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 LRRC1Q9BTT6 524 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 GOLGA6AQ9NYA3 693 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 RPL26L1Q9UNX3 145 aaKnown RBP11.49□□□□□ -0.57
CBWD3-206ENST00000478048 COQ6Q9Y2Z9 468 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 SPO11Q9Y5K1 396 aa11.49□□□□□ -0.57
CBWD3-206ENST00000478048 MYLKQ15746 1914 aa11.48□□□□□ -0.57
CBWD3-206ENST00000478048 KNL1Q8NG31 2342 aa11.48□□□□□ -0.57
CBWD3-206ENST00000478048 A0A1W2PQU0 124 aa11.48□□□□□ -0.57
CBWD3-206ENST00000478048 CAPN8A6NHC0 703 aa11.48□□□□□ -0.57
CBWD3-206ENST00000478048 LRRC72A6NJI9 287 aa11.48□□□□□ -0.57
CBWD3-206ENST00000478048 AURKAO14965 403 aa11.48□□□□□ -0.57
CBWD3-206ENST00000478048 CAPN5O15484 640 aaPredicted RBP11.48□□□□□ -0.57
CBWD3-206ENST00000478048 PSMD3O43242 534 aa11.48□□□□□ -0.57
CBWD3-206ENST00000478048 RNGTTO60942 597 aaKnown RBP11.48□□□□□ -0.57
CBWD3-206ENST00000478048 NDUFS2O75306 463 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms