RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 CSF2RBP32927 897 aa20.32■□□□□ 0.84
PDLIM1-202ENST00000477757 TRIM23P36406 574 aa20.32■□□□□ 0.84
PDLIM1-202ENST00000477757 TSPAN7P41732 249 aa20.32■□□□□ 0.84
PDLIM1-202ENST00000477757 STAT1P42224 750 aa20.32■□□□□ 0.84
PDLIM1-202ENST00000477757 RAB15P59190 212 aa20.32■□□□□ 0.84
PDLIM1-202ENST00000477757 BPIFB4P59827 614 aa20.32■□□□□ 0.84
PDLIM1-202ENST00000477757 KLRB1Q12918 225 aa20.32■□□□□ 0.84
PDLIM1-202ENST00000477757 ZNF354CQ86Y25 554 aa20.32■□□□□ 0.84
PDLIM1-202ENST00000477757 DNAAF5Q86Y56 855 aa20.32■□□□□ 0.84
PDLIM1-202ENST00000477757 ZDHHC1Q8WTX9 485 aa20.32■□□□□ 0.84
PDLIM1-202ENST00000477757 APOBEC4Q8WW27 367 aaKnown RBP20.32■□□□□ 0.84
PDLIM1-202ENST00000477757 KIAA1143Q96AT1 154 aaPredicted RBP20.32■□□□□ 0.84
PDLIM1-202ENST00000477757 KLC2Q9H0B6 622 aa20.32■□□□□ 0.84
PDLIM1-202ENST00000477757 PDCL3Q9H2J4 239 aa20.32■□□□□ 0.84
PDLIM1-202ENST00000477757 WDR26Q9H7D7 661 aa20.32■□□□□ 0.84
PDLIM1-202ENST00000477757 SLC39A1Q9NY26 324 aa20.32■□□□□ 0.84
PDLIM1-202ENST00000477757 PLEKHB1Q9UF11 243 aaPredicted RBP20.32■□□□□ 0.84
PDLIM1-202ENST00000477757 PILRAQ9UKJ1 303 aa20.32■□□□□ 0.84
PDLIM1-202ENST00000477757 FAM170AA1A519 330 aa20.31■□□□□ 0.84
PDLIM1-202ENST00000477757 PRR19A6NJB7 356 aa20.31■□□□□ 0.84
PDLIM1-202ENST00000477757 MTSS1O43312 755 aa20.31■□□□□ 0.84
PDLIM1-202ENST00000477757 LSM8O95777 96 aaKnown RBP20.31■□□□□ 0.84
PDLIM1-202ENST00000477757 OAS2P29728 719 aaKnown RBP20.31■□□□□ 0.84
PDLIM1-202ENST00000477757 CSTF2P33240 577 aaKnown RBP eCLIP20.31■□□□□ 0.84
PDLIM1-202ENST00000477757 CFAP58Q5T655 872 aa20.31■□□□□ 0.84
PDLIM1-202ENST00000477757 DCAF12Q5T6F0 453 aa20.31■□□□□ 0.84
PDLIM1-202ENST00000477757 ZSWIM9Q86XI8 627 aa20.31■□□□□ 0.84
PDLIM1-202ENST00000477757 NRROSQ86YC3 692 aa20.31■□□□□ 0.84
PDLIM1-202ENST00000477757 EMC1Q8N766 993 aa20.31■□□□□ 0.84
PDLIM1-202ENST00000477757 MSANTD4Q8NCY6 345 aa20.31■□□□□ 0.84
PDLIM1-202ENST00000477757 ZNF641Q96N77 438 aaPredicted RBP20.31■□□□□ 0.84
PDLIM1-202ENST00000477757 LGR4Q9BXB1 951 aa20.31■□□□□ 0.84
PDLIM1-202ENST00000477757 DNAJC12Q9UKB3 198 aa20.31■□□□□ 0.84
PDLIM1-202ENST00000477757 ECEL1O95672 775 aa20.3■□□□□ 0.84
PDLIM1-202ENST00000477757 FGFR1OPO95684 399 aaKnown RBP20.3■□□□□ 0.84
PDLIM1-202ENST00000477757 FGF1P05230 155 aa20.3■□□□□ 0.84
PDLIM1-202ENST00000477757 PLEKP08567 350 aaPredicted RBP20.3■□□□□ 0.84
PDLIM1-202ENST00000477757 ILF3Q12906 894 aaKnown RBP eCLIP20.3■□□□□ 0.84
PDLIM1-202ENST00000477757 RALGDSQ12967 914 aa20.3■□□□□ 0.84
PDLIM1-202ENST00000477757 SQSTM1Q13501 440 aa20.3■□□□□ 0.84
PDLIM1-202ENST00000477757 CDO1Q16878 200 aa20.3■□□□□ 0.84
PDLIM1-202ENST00000477757 FAM129CQ86XR2 697 aa20.3■□□□□ 0.84
PDLIM1-202ENST00000477757 ELOA2Q8IYF1 753 aaPredicted RBP20.3■□□□□ 0.84
PDLIM1-202ENST00000477757 RTL3Q8N8U3 475 aaKnown RBP20.3■□□□□ 0.84
PDLIM1-202ENST00000477757 BMPERQ8N8U9 685 aa20.3■□□□□ 0.84
PDLIM1-202ENST00000477757 TEFMQ96QE5 360 aaKnown RBP20.3■□□□□ 0.84
PDLIM1-202ENST00000477757 DPYSL5Q9BPU6 564 aa20.3■□□□□ 0.84
PDLIM1-202ENST00000477757 EFHD1Q9BUP0 239 aa20.3■□□□□ 0.84
PDLIM1-202ENST00000477757 GSDMCQ9BYG8 508 aa20.3■□□□□ 0.84
PDLIM1-202ENST00000477757 METTL5Q9NRN9 209 aaKnown RBP20.3■□□□□ 0.84
PDLIM1-202ENST00000477757 OCIAD1Q9NX40 245 aa20.3■□□□□ 0.84
PDLIM1-202ENST00000477757 TAAR2Q9P1P5 351 aa20.3■□□□□ 0.84
PDLIM1-202ENST00000477757 DACH1Q9UI36 760 aa20.3■□□□□ 0.84
PDLIM1-202ENST00000477757 MOSPD1Q9UJG1 213 aa20.3■□□□□ 0.84
PDLIM1-202ENST00000477757 IGHV1OR21-1A0A087WYE8 117 aa20.29■□□□□ 0.84
PDLIM1-202ENST00000477757 GOLGA6L4A6NEF3 574 aa20.29■□□□□ 0.84
PDLIM1-202ENST00000477757 ENO4A6NNW6 628 aa20.29■□□□□ 0.84
PDLIM1-202ENST00000477757 PRKCGP05129 697 aa20.29■□□□□ 0.84
PDLIM1-202ENST00000477757 CYP11B1P15538 503 aa20.29■□□□□ 0.84
PDLIM1-202ENST00000477757 CYTH1Q15438 398 aa20.29■□□□□ 0.84
PDLIM1-202ENST00000477757 C15orf59Q2T9L4 293 aaPredicted RBP20.29■□□□□ 0.84
PDLIM1-202ENST00000477757 ANKS6Q68DC2 871 aa20.29■□□□□ 0.84
PDLIM1-202ENST00000477757 NLGN4XQ8N0W4 816 aa20.29■□□□□ 0.84
PDLIM1-202ENST00000477757 NLGN4YQ8NFZ3 816 aaPredicted RBP20.29■□□□□ 0.84
PDLIM1-202ENST00000477757 TUBGCP5Q96RT8 1024 aa20.29■□□□□ 0.84
PDLIM1-202ENST00000477757 MAGEB5Q9BZ81 275 aa20.29■□□□□ 0.84
PDLIM1-202ENST00000477757 SPRY4Q9C004 299 aa20.29■□□□□ 0.84
PDLIM1-202ENST00000477757 CARS2Q9HA77 564 aaKnown RBP20.29■□□□□ 0.84
PDLIM1-202ENST00000477757 TP53TG5Q9Y2B4 290 aa20.29■□□□□ 0.84
PDLIM1-202ENST00000477757 LRBAP50851 2863 aa20.28■□□□□ 0.84
PDLIM1-202ENST00000477757 LOC101059948A0A1B0GTJ6 334 aa20.28■□□□□ 0.84
PDLIM1-202ENST00000477757 PDE2AO00408 941 aaPredicted RBP20.28■□□□□ 0.84
PDLIM1-202ENST00000477757 BUB1BO60566 1050 aaPredicted RBP20.28■□□□□ 0.84
PDLIM1-202ENST00000477757 ELFN1P0C7U0 828 aa20.28■□□□□ 0.84
PDLIM1-202ENST00000477757 MYCLP1P12525 358 aaPredicted RBP20.28■□□□□ 0.84
PDLIM1-202ENST00000477757 GM2AP17900 193 aa20.28■□□□□ 0.84
PDLIM1-202ENST00000477757 MAP4P27816 1152 aaKnown RBP20.28■□□□□ 0.84
PDLIM1-202ENST00000477757 SDC4P31431 198 aa20.28■□□□□ 0.84
PDLIM1-202ENST00000477757 YBEYP58557 167 aaPredicted RBP20.28■□□□□ 0.84
PDLIM1-202ENST00000477757 BIRC2Q13490 618 aa20.28■□□□□ 0.84
PDLIM1-202ENST00000477757 SEPT6Q14141 434 aa20.28■□□□□ 0.84
PDLIM1-202ENST00000477757 DEFB109BQ30KR1 87 aa20.28■□□□□ 0.84
PDLIM1-202ENST00000477757 PARP15Q460N3 678 aa20.28■□□□□ 0.84
PDLIM1-202ENST00000477757 CCDC14Q49A88 953 aa20.28■□□□□ 0.84
PDLIM1-202ENST00000477757 CRTC2Q53ET0 693 aaPredicted RBP20.28■□□□□ 0.84
PDLIM1-202ENST00000477757 NKAIN2Q5VXU1 208 aa20.28■□□□□ 0.84
PDLIM1-202ENST00000477757 LIPIQ6XZB0 460 aa20.28■□□□□ 0.84
PDLIM1-202ENST00000477757 PELI3Q8N2H9 469 aa20.28■□□□□ 0.84
PDLIM1-202ENST00000477757 CCDC185Q8N715 623 aa20.28■□□□□ 0.84
PDLIM1-202ENST00000477757 RTP4Q96DX8 246 aa20.28■□□□□ 0.84
PDLIM1-202ENST00000477757 TRNAU1APQ9NX07 287 aaKnown RBP20.28■□□□□ 0.84
PDLIM1-202ENST00000477757 TMEM9Q9P0T7 183 aa20.28■□□□□ 0.84
PDLIM1-202ENST00000477757 ANKRD17O75179 2603 aaKnown RBP20.27■□□□□ 0.84
PDLIM1-202ENST00000477757 EFCAB7A8K855 629 aa20.27■□□□□ 0.84
PDLIM1-202ENST00000477757 RASA4BC9J798 803 aa20.27■□□□□ 0.84
PDLIM1-202ENST00000477757 RASA4O43374 803 aa20.27■□□□□ 0.84
PDLIM1-202ENST00000477757 MPSTP25325 297 aa20.27■□□□□ 0.84
PDLIM1-202ENST00000477757 NOMO3P69849 1222 aa20.27■□□□□ 0.84
PDLIM1-202ENST00000477757 MC1RQ01726 317 aa20.27■□□□□ 0.84
PDLIM1-202ENST00000477757 ABHD18Q0P651 414 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms