RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 DKK3Q9UBP4 350 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 LHX3Q9UBR4 397 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 TMEM59LQ9UK28 342 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 ATP8A1Q9Y2Q0 1164 aa6.71□□□□□ -1.34
RTFDC1-206ENST00000477485 TNRC6AQ8NDV7 1962 aaKnown RBP6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 IGHV5-10-1A0A0J9YXX1 117 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 CXorf51AA0A1B0GTR3 108 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 PRSS38A1L453 326 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 ANKRD62A6NC57 917 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 EFCAB7A8K855 629 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 ZNF891A8MT65 544 aaPredicted RBP6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 A8MU76 341 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 RAD1O60671 282 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 GADD45BO75293 160 aaPredicted RBP6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 GFPT2O94808 682 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 ECEL1O95672 775 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 FGF3P11487 239 aaPredicted RBP6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 KRT3P12035 628 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 PNLIPP16233 465 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 DESP17661 470 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 GPD1P21695 349 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 AK4P27144 223 aaPredicted RBP6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 UGT1A3P35503 534 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 MAPK9P45984 424 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 KIAA1024LP59773 190 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 TPI1P60174 286 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 B4GALNT1Q00973 533 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 NRG1Q02297 640 aaPredicted RBP6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 BCL2L1Q07817 233 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 SYCP1Q15431 976 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 CYTH1Q15438 398 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 VWA3BQ502W6 1294 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 INO80DQ53TQ3 878 aaPredicted RBP6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 C16orf46Q6P387 395 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 BRAT1Q6PJG6 821 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 STRADAQ7RTN6 431 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 ZSWIM9Q86XI8 627 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 DTX1Q86Y01 620 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 RTL3Q8N8U3 475 aaKnown RBP6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 GPBAR1Q8TDU6 330 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 SLC20A1Q8WUM9 679 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 PATE1Q8WXA2 126 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 NKD1Q969G9 470 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 NUS1Q96E22 293 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 RNF31Q96EP0 1072 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 CELF6Q96J87 481 aaKnown RBP6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 CINPQ9BW66 212 aaPredicted RBP6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 LGR4Q9BXB1 951 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 SLC12A9Q9BXP2 914 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 NDST4Q9H3R1 872 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 ATP13A3Q9H7F0 1226 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 SP110Q9HB58 689 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 LRRC4CQ9HCJ2 640 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 PHPT1Q9NRX4 125 aaPredicted RBP6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 RYDENQ9NUL5 291 aaKnown RBP6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 SPATS2LQ9NUQ6 558 aaKnown RBP6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 KCNK4Q9NYG8 393 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 MFHAS1Q9Y4C4 1052 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 B3GALT1Q9Y5Z6 326 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 DGKBQ9Y6T7 804 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 UTP20O75691 2785 aaKnown RBP6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 COL12A1Q99715 3063 aa6.7□□□□□ -1.34
RTFDC1-206ENST00000477485 TRBV23OR9-2A0A075B6M9 112 aa6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 BLACEA4D250 179 aa6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 C2CD4BA6NLJ0 364 aa6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 F8VZ95 297 aa6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 J3KR12 359 aa6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 DFFAO00273 331 aa6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 PDE2AO00408 941 aaPredicted RBP6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 HGSO14964 777 aaPredicted RBP6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 NKX2-8O15522 239 aa6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 DAPK3O43293 454 aa6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 CCP110O43303 1012 aa6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 B4GAT1O43505 415 aa6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 DUX1O43812 170 aa6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 BUB1BO60566 1050 aaPredicted RBP6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 PALMO75781 387 aa6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 MYCLP1P12525 358 aaPredicted RBP6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 CCNB1P14635 433 aa6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 CASRP41180 1078 aa6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 STAT1P42224 750 aa6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 PTPN9P43378 593 aa6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 NSFP46459 744 aaKnown RBP6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 HDAC4P56524 1084 aa6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 YBEYP58557 167 aaPredicted RBP6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 POLR2LP62875 67 aaKnown RBP6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 RALGDSQ12967 914 aa6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 SERINC3Q13530 473 aa6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 SEPT6Q14141 434 aa6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 DEFB109BQ30KR1 87 aa6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 PARP15Q460N3 678 aa6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 C4orf17Q53FE4 359 aa6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 ARTNQ5T4W7 220 aa6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 DCAF12Q5T6F0 453 aa6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 ANKS6Q68DC2 871 aa6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 RAET1GQ6H3X3 334 aa6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 PNCKQ6P2M8 343 aa6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 OGFOD3Q6PK18 319 aa6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 BNIPLQ7Z465 357 aa6.69□□□□□ -1.34
RTFDC1-206ENST00000477485 SRLQ86TD4 932 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms