RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 POLR3BQ9NW08 1133 aaPredicted RBP11.53□□□□□ -0.56
NUP188-205ENST00000477069 STX18Q9P2W9 335 aaKnown RBP11.53□□□□□ -0.56
NUP188-205ENST00000477069 ZNF106Q9H2Y7 1883 aaKnown RBP11.53□□□□□ -0.56
NUP188-205ENST00000477069 GOLGA8QA0A0J9YX86 632 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 GOLGA8OA6NCC3 632 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 GOLGA8NF8WBI6 632 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 GFRA2O00451 464 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 SLC22A2O15244 555 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 INSIG1O15503 277 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 GREM1O60565 184 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 CCNT2O60583 730 aaKnown RBP11.53□□□□□ -0.56
NUP188-205ENST00000477069 TBX10O75333 385 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 IPO13O94829 963 aaKnown RBP11.53□□□□□ -0.56
NUP188-205ENST00000477069 GLP2RO95838 553 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 RBP1P09455 135 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 EPHA3P29320 983 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 ARF5P84085 180 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 PLD1Q13393 1074 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 TRIM60Q495X7 471 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 CMPK2Q5EBM0 449 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 RALGPS1Q5JS13 557 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 ISCA2Q86U28 154 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 BBS5Q8N3I7 341 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 ACTRT2Q8TDY3 377 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 CCDC126Q96EE4 140 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 POPDC3Q9HBV1 291 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 TBX21Q9UL17 535 aa11.53□□□□□ -0.56
NUP188-205ENST00000477069 TMEM233B4DJY2 109 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 BUD23O43709 281 aaKnown RBP11.52□□□□□ -0.57
NUP188-205ENST00000477069 PENKP01210 267 aaPredicted RBP11.52□□□□□ -0.57
NUP188-205ENST00000477069 RHOCP08134 193 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 PIRTP0C851 137 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 KCNC1P48547 511 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 STC1P52823 247 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 MXRA7P84157 204 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 NFKB2Q00653 900 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 SULT2A1Q06520 285 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 GALNT1Q10472 559 aaPredicted RBP11.52□□□□□ -0.57
NUP188-205ENST00000477069 IKBKEQ14164 716 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 GPR158Q5T848 1215 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 SCG3Q8WXD2 468 aaKnown RBP11.52□□□□□ -0.57
NUP188-205ENST00000477069 CDKN2AIPNLQ96HQ2 116 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 SHCBP1LQ9BZQ2 653 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 CYP4F11Q9HBI6 524 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 TNFRSF12AQ9NP84 129 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 SCN8AQ9UQD0 1980 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 NEMP1O14524 444 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 MYCP01106 439 aaPredicted RBP11.52□□□□□ -0.57
NUP188-205ENST00000477069 CCL5P13501 91 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 CD1DP15813 335 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 PIK3R1P27986 724 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 PPP3CCP48454 512 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 TLE2Q04725 743 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 RAB33AQ14088 237 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 C1orf53Q5VUE5 145 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 KIAA1841Q6NSI8 718 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 PELI3Q8N2H9 469 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 CCNYL1Q8N7R7 359 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 MDGA1Q8NFP4 955 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 OR4L1Q8NH43 312 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 ADAMTS19Q8TE59 1207 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 TOP1MTQ969P6 601 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 PTERQ96BW5 349 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 L3HYPDHQ96EM0 354 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 LENG8Q96PV6 779 aaPredicted RBP11.52□□□□□ -0.57
NUP188-205ENST00000477069 RTKNQ9BST9 563 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 CATSPERZQ9NTU4 200 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 CDYLQ9Y232 598 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 CRYL1Q9Y2S2 319 aa11.52□□□□□ -0.57
NUP188-205ENST00000477069 ARIH1Q9Y4X5 557 aaPredicted RBP11.52□□□□□ -0.57
NUP188-205ENST00000477069 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.51□□□□□ -0.57
NUP188-205ENST00000477069 SDHDO14521 159 aa11.51□□□□□ -0.57
NUP188-205ENST00000477069 ZMPSTE24O75844 475 aa11.51□□□□□ -0.57
NUP188-205ENST00000477069 HOXB8P17481 243 aaPredicted RBP11.51□□□□□ -0.57
NUP188-205ENST00000477069 ADSLP30566 484 aaPredicted RBP11.51□□□□□ -0.57
NUP188-205ENST00000477069 SLC34A1Q06495 639 aa11.51□□□□□ -0.57
NUP188-205ENST00000477069 ZNF177Q13360 481 aaPredicted RBP11.51□□□□□ -0.57
NUP188-205ENST00000477069 PEX6Q13608 980 aa11.51□□□□□ -0.57
NUP188-205ENST00000477069 MRNIPQ6NTE8 343 aa11.51□□□□□ -0.57
NUP188-205ENST00000477069 KLC3Q6P597 504 aa11.51□□□□□ -0.57
NUP188-205ENST00000477069 ZNF783Q6ZMS7 281 aa11.51□□□□□ -0.57
NUP188-205ENST00000477069 RNF135Q8IUD6 432 aa11.51□□□□□ -0.57
NUP188-205ENST00000477069 EXOC2Q96KP1 924 aa11.51□□□□□ -0.57
NUP188-205ENST00000477069 SPON2Q9BUD6 331 aa11.51□□□□□ -0.57
NUP188-205ENST00000477069 GSTO2Q9H4Y5 243 aa11.51□□□□□ -0.57
NUP188-205ENST00000477069 STOML1Q9UBI4 398 aa11.51□□□□□ -0.57
NUP188-205ENST00000477069 SSX2IPQ9Y2D8 614 aa11.51□□□□□ -0.57
NUP188-205ENST00000477069 MED16Q9Y2X0 877 aa11.51□□□□□ -0.57
NUP188-205ENST00000477069 LATS1O95835 1130 aa11.51□□□□□ -0.57
NUP188-205ENST00000477069 OLFM2O95897 454 aa11.51□□□□□ -0.57
NUP188-205ENST00000477069 CES1P23141 567 aa11.51□□□□□ -0.57
NUP188-205ENST00000477069 PPARGP37231 505 aaPredicted RBP11.51□□□□□ -0.57
NUP188-205ENST00000477069 ALDH1A3P47895 512 aa11.51□□□□□ -0.57
NUP188-205ENST00000477069 SATB1Q01826 763 aa11.51□□□□□ -0.57
NUP188-205ENST00000477069 TAF1AQ15573 450 aaPredicted RBP11.51□□□□□ -0.57
NUP188-205ENST00000477069 SETMARQ53H47 684 aaPredicted RBP11.51□□□□□ -0.57
NUP188-205ENST00000477069 SH2D4BQ5SQS7 431 aa11.51□□□□□ -0.57
NUP188-205ENST00000477069 ACAD11Q709F0 780 aa11.51□□□□□ -0.57
NUP188-205ENST00000477069 AARSD1Q9BTE6 412 aaKnown RBP11.51□□□□□ -0.57
NUP188-205ENST00000477069 ZBED2Q9BTP6 218 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms