RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 METTL5Q9NRN9 209 aaKnown RBP16.51■□□□□ 0.23
APOBEC3F-203ENST00000476513 SLC39A1Q9NY26 324 aa16.51■□□□□ 0.23
APOBEC3F-203ENST00000476513 PRSS38A1L453 326 aa16.5■□□□□ 0.23
APOBEC3F-203ENST00000476513 CFAP69A5D8W1 941 aa16.5■□□□□ 0.23
APOBEC3F-203ENST00000476513 CAPN5O15484 640 aaPredicted RBP16.5■□□□□ 0.23
APOBEC3F-203ENST00000476513 BUB1BO60566 1050 aaPredicted RBP16.5■□□□□ 0.23
APOBEC3F-203ENST00000476513 CCNB1P14635 433 aa16.5■□□□□ 0.23
APOBEC3F-203ENST00000476513 CYP11B1P15538 503 aa16.5■□□□□ 0.23
APOBEC3F-203ENST00000476513 CSTF2P33240 577 aaKnown RBP eCLIP16.5■□□□□ 0.23
APOBEC3F-203ENST00000476513 CCDC14Q49A88 953 aa16.5■□□□□ 0.23
APOBEC3F-203ENST00000476513 CFAP58Q5T655 872 aa16.5■□□□□ 0.23
APOBEC3F-203ENST00000476513 NKAIN2Q5VXU1 208 aa16.5■□□□□ 0.23
APOBEC3F-203ENST00000476513 DNAAF5Q86Y56 855 aa16.5■□□□□ 0.23
APOBEC3F-203ENST00000476513 RTL3Q8N8U3 475 aaKnown RBP16.5■□□□□ 0.23
APOBEC3F-203ENST00000476513 OR4D9Q8NGE8 314 aa16.5■□□□□ 0.23
APOBEC3F-203ENST00000476513 CPA5Q8WXQ8 436 aa16.5■□□□□ 0.23
APOBEC3F-203ENST00000476513 ZNF641Q96N77 438 aaPredicted RBP16.5■□□□□ 0.23
APOBEC3F-203ENST00000476513 ASPSCR1Q9BZE9 553 aa16.5■□□□□ 0.23
APOBEC3F-203ENST00000476513 OCIAD1Q9NX40 245 aa16.5■□□□□ 0.23
APOBEC3F-203ENST00000476513 PILRAQ9UKJ1 303 aa16.5■□□□□ 0.23
APOBEC3F-203ENST00000476513 ZW10O43264 779 aa16.49■□□□□ 0.23
APOBEC3F-203ENST00000476513 MTSS1O43312 755 aa16.49■□□□□ 0.23
APOBEC3F-203ENST00000476513 ECEL1O95672 775 aa16.49■□□□□ 0.23
APOBEC3F-203ENST00000476513 LSM8O95777 96 aaKnown RBP16.49■□□□□ 0.23
APOBEC3F-203ENST00000476513 THRAP10827 490 aa16.49■□□□□ 0.23
APOBEC3F-203ENST00000476513 MPSTP25325 297 aa16.49■□□□□ 0.23
APOBEC3F-203ENST00000476513 STAT1P42224 750 aa16.49■□□□□ 0.23
APOBEC3F-203ENST00000476513 GPR3P46089 330 aa16.49■□□□□ 0.23
APOBEC3F-203ENST00000476513 CD97P48960 835 aa16.49■□□□□ 0.23
APOBEC3F-203ENST00000476513 CDC20Q12834 499 aa16.49■□□□□ 0.23
APOBEC3F-203ENST00000476513 RALGDSQ12967 914 aa16.49■□□□□ 0.23
APOBEC3F-203ENST00000476513 GRM3Q14832 879 aa16.49■□□□□ 0.23
APOBEC3F-203ENST00000476513 TSR1Q2NL82 804 aaKnown RBP16.49■□□□□ 0.23
APOBEC3F-203ENST00000476513 CAMK1DQ8IU85 385 aa16.49■□□□□ 0.23
APOBEC3F-203ENST00000476513 PELI3Q8N2H9 469 aa16.49■□□□□ 0.23
APOBEC3F-203ENST00000476513 CCDC185Q8N715 623 aa16.49■□□□□ 0.23
APOBEC3F-203ENST00000476513 APOBEC4Q8WW27 367 aaKnown RBP16.49■□□□□ 0.23
APOBEC3F-203ENST00000476513 RXFP2Q8WXD0 754 aa16.49■□□□□ 0.23
APOBEC3F-203ENST00000476513 WDR26Q9H7D7 661 aa16.49■□□□□ 0.23
APOBEC3F-203ENST00000476513 GPN2Q9H9Y4 310 aaPredicted RBP16.49■□□□□ 0.23
APOBEC3F-203ENST00000476513 TAAR2Q9P1P5 351 aa16.49■□□□□ 0.23
APOBEC3F-203ENST00000476513 ICE1Q9Y2F5 2266 aa16.49■□□□□ 0.23
APOBEC3F-203ENST00000476513 ARHGEF17Q96PE2 2063 aaPredicted RBP16.49■□□□□ 0.23
APOBEC3F-203ENST00000476513 PRR19A6NJB7 356 aa16.48■□□□□ 0.23
APOBEC3F-203ENST00000476513 B4E171 279 aa16.48■□□□□ 0.23
APOBEC3F-203ENST00000476513 RASA4BC9J798 803 aa16.48■□□□□ 0.23
APOBEC3F-203ENST00000476513 RASA4O43374 803 aa16.48■□□□□ 0.23
APOBEC3F-203ENST00000476513 GM2AP17900 193 aa16.48■□□□□ 0.23
APOBEC3F-203ENST00000476513 OAS2P29728 719 aaKnown RBP16.48■□□□□ 0.23
APOBEC3F-203ENST00000476513 SDC4P31431 198 aa16.48■□□□□ 0.23
APOBEC3F-203ENST00000476513 CSF2RBP32927 897 aa16.48■□□□□ 0.23
APOBEC3F-203ENST00000476513 TSPAN7P41732 249 aa16.48■□□□□ 0.23
APOBEC3F-203ENST00000476513 YBEYP58557 167 aaPredicted RBP16.48■□□□□ 0.23
APOBEC3F-203ENST00000476513 NOMO3P69849 1222 aa16.48■□□□□ 0.23
APOBEC3F-203ENST00000476513 SQSTM1Q13501 440 aa16.48■□□□□ 0.23
APOBEC3F-203ENST00000476513 DEFB109BQ30KR1 87 aa16.48■□□□□ 0.23
APOBEC3F-203ENST00000476513 LACTB2Q53H82 288 aaPredicted RBP16.48■□□□□ 0.23
APOBEC3F-203ENST00000476513 DCAF12Q5T6F0 453 aa16.48■□□□□ 0.23
APOBEC3F-203ENST00000476513 NAA35Q5VZE5 725 aa16.48■□□□□ 0.23
APOBEC3F-203ENST00000476513 ANKS6Q68DC2 871 aa16.48■□□□□ 0.23
APOBEC3F-203ENST00000476513 LIPIQ6XZB0 460 aa16.48■□□□□ 0.23
APOBEC3F-203ENST00000476513 PHLDB2Q86SQ0 1253 aa16.48■□□□□ 0.23
APOBEC3F-203ENST00000476513 FAM129CQ86XR2 697 aa16.48■□□□□ 0.23
APOBEC3F-203ENST00000476513 MSANTD4Q8NCY6 345 aa16.48■□□□□ 0.23
APOBEC3F-203ENST00000476513 GPT2Q8TD30 523 aa16.48■□□□□ 0.23
APOBEC3F-203ENST00000476513 PATE1Q8WXA2 126 aa16.48■□□□□ 0.23
APOBEC3F-203ENST00000476513 SPRY4Q9C004 299 aa16.48■□□□□ 0.23
APOBEC3F-203ENST00000476513 SUDS3Q9H7L9 328 aaPredicted RBP16.48■□□□□ 0.23
APOBEC3F-203ENST00000476513 CARS2Q9HA77 564 aaKnown RBP16.48■□□□□ 0.23
APOBEC3F-203ENST00000476513 TMEM9Q9P0T7 183 aa16.48■□□□□ 0.23
APOBEC3F-203ENST00000476513 ANKRD36A6QL64 1941 aa16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 IGHV1OR21-1A0A087WYE8 117 aa16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 LOC101059948A0A1B0GTJ6 334 aa16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 C2CD4BA6NLJ0 364 aa16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 EFCAB7A8K855 629 aa16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 PDE2AO00408 941 aaPredicted RBP16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 PPM1DO15297 605 aa16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 TEX33O43247 280 aa16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 FUCA1P04066 466 aa16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 ELFN1P0C7U0 828 aa16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 AK4P27144 223 aaPredicted RBP16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 EPHB2P29323 1055 aa16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 HDAC4P56524 1084 aa16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 RAB15P59190 212 aa16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 ILF3Q12906 894 aaKnown RBP eCLIP16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 KLRB1Q12918 225 aa16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 BIRC2Q13490 618 aa16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 PARP15Q460N3 678 aa16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 DPY19L2P1Q6NXN4 242 aa16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 PNCKQ6P2M8 343 aa16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 STRADAQ7RTN6 431 aa16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 NOP9Q86U38 636 aaKnown RBP16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 ATCAYQ86WG3 371 aa16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 NRSN1Q8IZ57 195 aa16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 UNC5BQ8IZJ1 945 aa16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 NLGN4XQ8N0W4 816 aa16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 PYROXD2Q8N2H3 581 aa16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 BMPERQ8N8U9 685 aa16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 NLGN4YQ8NFZ3 816 aaPredicted RBP16.47■□□□□ 0.23
APOBEC3F-203ENST00000476513 JOSD2Q8TAC2 188 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms