RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 BLOC1S4Q9NUP1 217 aa5.06□□□□□ -1.6
PTCD3-211ENST00000476215 EHD2Q9NZN4 543 aa5.06□□□□□ -1.6
PTCD3-211ENST00000476215 DLGAP2Q9P1A6 1054 aa5.06□□□□□ -1.6
PTCD3-211ENST00000476215 FBXO9Q9UK97 447 aaPredicted RBP5.06□□□□□ -1.6
PTCD3-211ENST00000476215 RCOR1Q9UKL0 485 aa5.06□□□□□ -1.6
PTCD3-211ENST00000476215 PCDHA7Q9UN72 937 aa5.06□□□□□ -1.6
PTCD3-211ENST00000476215 DYTNA2CJ06 578 aa5.05□□□□□ -1.6
PTCD3-211ENST00000476215 TMEM202A6NGA9 273 aa5.05□□□□□ -1.6
PTCD3-211ENST00000476215 IKBKBO14920 756 aa5.05□□□□□ -1.6
PTCD3-211ENST00000476215 HOXC6P09630 235 aa5.05□□□□□ -1.6
PTCD3-211ENST00000476215 ACADMP11310 421 aa5.05□□□□□ -1.6
PTCD3-211ENST00000476215 LAMP2P13473 410 aa5.05□□□□□ -1.6
PTCD3-211ENST00000476215 GPTP24298 496 aa5.05□□□□□ -1.6
PTCD3-211ENST00000476215 C21orf33P30042 268 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-211ENST00000476215 MXI1P50539 228 aa5.05□□□□□ -1.6
PTCD3-211ENST00000476215 F2RL1P55085 397 aa5.05□□□□□ -1.6
PTCD3-211ENST00000476215 ARF3P61204 181 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-211ENST00000476215 ARF1P84077 181 aaKnown RBP5.05□□□□□ -1.6
PTCD3-211ENST00000476215 DSC1Q08554 894 aa5.05□□□□□ -1.6
PTCD3-211ENST00000476215 CSTF3Q12996 717 aaKnown RBP5.05□□□□□ -1.6
PTCD3-211ENST00000476215 OLIG2Q13516 323 aa5.05□□□□□ -1.6
PTCD3-211ENST00000476215 EIF4A2Q14240 407 aaKnown RBP5.05□□□□□ -1.6
PTCD3-211ENST00000476215 C2orf68Q2NKX9 166 aa5.05□□□□□ -1.6
PTCD3-211ENST00000476215 TDRD12Q587J7 1177 aaKnown RBP5.05□□□□□ -1.6
PTCD3-211ENST00000476215 TTI2Q6NXR4 508 aa5.05□□□□□ -1.6
PTCD3-211ENST00000476215 CCDC129Q6ZRS4 1044 aa5.05□□□□□ -1.6
PTCD3-211ENST00000476215 FJX1Q86VR8 437 aa5.05□□□□□ -1.6
PTCD3-211ENST00000476215 CCDC13Q8IYE1 715 aa5.05□□□□□ -1.6
PTCD3-211ENST00000476215 FBXL14Q8N1E6 418 aa5.05□□□□□ -1.6
PTCD3-211ENST00000476215 NEXN-AS1Q8NBZ9 246 aa5.05□□□□□ -1.6
PTCD3-211ENST00000476215 ARHGEF2Q92974 986 aaKnown RBP5.05□□□□□ -1.6
PTCD3-211ENST00000476215 WDFY2Q96P53 400 aa5.05□□□□□ -1.6
PTCD3-211ENST00000476215 ITPAQ9BY32 194 aa5.05□□□□□ -1.6
PTCD3-211ENST00000476215 MUC13Q9H3R2 512 aa5.05□□□□□ -1.6
PTCD3-211ENST00000476215 POLR1BQ9H9Y6 1135 aa5.05□□□□□ -1.6
PTCD3-211ENST00000476215 GPR108Q9NPR9 543 aa5.05□□□□□ -1.6
PTCD3-211ENST00000476215 ABI3Q9P2A4 366 aa5.05□□□□□ -1.6
PTCD3-211ENST00000476215 SLCO3A1Q9UIG8 710 aa5.05□□□□□ -1.6
PTCD3-211ENST00000476215 CORO1CQ9ULV4 474 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-211ENST00000476215 ERVK-11Q9UQG0 969 aa5.05□□□□□ -1.6
PTCD3-211ENST00000476215 LAS1LQ9Y4W2 734 aaKnown RBP5.05□□□□□ -1.6
PTCD3-211ENST00000476215 CEPT1Q9Y6K0 416 aa5.05□□□□□ -1.6
PTCD3-211ENST00000476215 FAM237AA0A1B0GTK4 181 aa5.04□□□□□ -1.6
PTCD3-211ENST00000476215 A0A1W2PQF6 199 aa5.04□□□□□ -1.6
PTCD3-211ENST00000476215 A0A1W2PRG0 241 aa5.04□□□□□ -1.6
PTCD3-211ENST00000476215 HSPA12AO43301 675 aa5.04□□□□□ -1.6
PTCD3-211ENST00000476215 ZBED4O75132 1171 aa5.04□□□□□ -1.6
PTCD3-211ENST00000476215 NKX2-2O95096 273 aa5.04□□□□□ -1.6
PTCD3-211ENST00000476215 IPO7O95373 1038 aaKnown RBP5.04□□□□□ -1.6
PTCD3-211ENST00000476215 CH25HO95992 272 aa5.04□□□□□ -1.6
PTCD3-211ENST00000476215 EIF2S1P05198 315 aaKnown RBP5.04□□□□□ -1.6
PTCD3-211ENST00000476215 CRYZQ08257 329 aaKnown RBP5.04□□□□□ -1.6
PTCD3-211ENST00000476215 CXorf66Q5JRM2 361 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-211ENST00000476215 C6orf141Q5SZD1 244 aa5.04□□□□□ -1.6
PTCD3-211ENST00000476215 ANKRD54Q6NXT1 300 aa5.04□□□□□ -1.6
PTCD3-211ENST00000476215 NCEH1Q6PIU2 408 aa5.04□□□□□ -1.6
PTCD3-211ENST00000476215 B3GNT6Q6ZMB0 384 aa5.04□□□□□ -1.6
PTCD3-211ENST00000476215 IKBIPQ70UQ0 350 aa5.04□□□□□ -1.6
PTCD3-211ENST00000476215 MTSS1LQ765P7 747 aa5.04□□□□□ -1.6
PTCD3-211ENST00000476215 SLC41A2Q96JW4 573 aa5.04□□□□□ -1.6
PTCD3-211ENST00000476215 MARK4Q96L34 752 aa5.04□□□□□ -1.6
PTCD3-211ENST00000476215 LRFN5Q96NI6 719 aa5.04□□□□□ -1.6
PTCD3-211ENST00000476215 FAM110AQ9BQ89 295 aa5.04□□□□□ -1.6
PTCD3-211ENST00000476215 TMEM47Q9BQJ4 181 aa5.04□□□□□ -1.6
PTCD3-211ENST00000476215 NTPCRQ9BSD7 190 aaKnown RBP5.04□□□□□ -1.6
PTCD3-211ENST00000476215 SLC25A33Q9BSK2 321 aa5.04□□□□□ -1.6
PTCD3-211ENST00000476215 PLEKHA5Q9HAU0 1116 aa5.04□□□□□ -1.6
PTCD3-211ENST00000476215 EIF2B3Q9NR50 452 aaKnown RBP5.04□□□□□ -1.6
PTCD3-211ENST00000476215 CDC14AQ9UNH5 594 aa5.04□□□□□ -1.6
PTCD3-211ENST00000476215 SLC45A1Q9Y2W3 748 aa5.04□□□□□ -1.6
PTCD3-211ENST00000476215 ADAM18Q9Y3Q7 739 aa5.04□□□□□ -1.6
PTCD3-211ENST00000476215 STON1Q9Y6Q2 735 aa5.04□□□□□ -1.6
PTCD3-211ENST00000476215 EVPLQ92817 2033 aa5.04□□□□□ -1.6
PTCD3-211ENST00000476215 RUSC2Q8N2Y8 1516 aa5.03□□□□□ -1.6
PTCD3-211ENST00000476215 LINC01553A4QN01 128 aa5.03□□□□□ -1.6
PTCD3-211ENST00000476215 LIPT2A6NK58 231 aa5.03□□□□□ -1.6
PTCD3-211ENST00000476215 AKR1B15C9JRZ8 316 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-211ENST00000476215 WNT9BO14905 357 aa5.03□□□□□ -1.6
PTCD3-211ENST00000476215 ZIC3O60481 467 aa5.03□□□□□ -1.6
PTCD3-211ENST00000476215 TIPRLO75663 272 aa5.03□□□□□ -1.6
PTCD3-211ENST00000476215 SERPINI2O75830 405 aa5.03□□□□□ -1.6
PTCD3-211ENST00000476215 MLYCDO95822 493 aa5.03□□□□□ -1.6
PTCD3-211ENST00000476215 ALPLP05186 524 aa5.03□□□□□ -1.6
PTCD3-211ENST00000476215 CYC1P08574 325 aa5.03□□□□□ -1.6
PTCD3-211ENST00000476215 SNHG28P0DPA3 235 aa5.03□□□□□ -1.6
PTCD3-211ENST00000476215 G6PDP11413 515 aa5.03□□□□□ -1.6
PTCD3-211ENST00000476215 ZNF182P17025 639 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-211ENST00000476215 MAPK4P31152 587 aa5.03□□□□□ -1.6
PTCD3-211ENST00000476215 PPARGP37231 505 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-211ENST00000476215 EIF2S3P41091 472 aaKnown RBP5.03□□□□□ -1.6
PTCD3-211ENST00000476215 CDKN2AP42771 156 aaKnown RBP5.03□□□□□ -1.6
PTCD3-211ENST00000476215 HTR6P50406 440 aa5.03□□□□□ -1.6
PTCD3-211ENST00000476215 PLCB4Q15147 1175 aa5.03□□□□□ -1.6
PTCD3-211ENST00000476215 USP41Q3LFD5 358 aa5.03□□□□□ -1.6
PTCD3-211ENST00000476215 SLC45A4Q5BKX6 768 aa5.03□□□□□ -1.6
PTCD3-211ENST00000476215 C8orf82Q6P1X6 216 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-211ENST00000476215 NEK10Q6ZWH5 1172 aa5.03□□□□□ -1.6
PTCD3-211ENST00000476215 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-211ENST00000476215 ZC3HC1Q86WB0 502 aaKnown RBP5.03□□□□□ -1.6
PTCD3-211ENST00000476215 WDR63Q8IWG1 891 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms