RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 NFKB1P19838 968 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 CD38P28907 300 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 CXCR5P32302 372 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 CDK18Q07002 472 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 MPP3Q13368 585 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 ARHGEF7Q14155 803 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 PRPSAP1Q14558 356 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 AGERQ15109 404 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 CCNG2Q16589 344 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 LONRF2Q1L5Z9 754 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 ANKRD20A2Q5SQ80 823 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 ANKRD20A1Q5TYW2 823 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 ANKRD20A3Q5VUR7 823 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 IL27RAQ6UWB1 636 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 RASGEF1CQ8N431 466 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 MFSD2AQ8NA29 543 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 TMEM145Q8NBT3 493 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 OR2I1PQ8NGU4 316 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 LRRC45Q96CN5 670 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 IFT43Q96FT9 208 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 SLC6A18Q96N87 628 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 SRPK1Q96SB4 655 aaKnown RBP15.18■□□□□ 0.02
SNX13-207ENST00000475800 WRAP53Q9BUR4 548 aaKnown RBP15.18■□□□□ 0.02
SNX13-207ENST00000475800 GOLGA6AQ9NYA3 693 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 B4GALT6Q9UBX8 382 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 SNX12Q9UMY4 172 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 HS3ST3A1Q9Y663 406 aa15.18■□□□□ 0.02
SNX13-207ENST00000475800 USP24Q9UPU5 2620 aa15.17■□□□□ 0.02
SNX13-207ENST00000475800 CFAP47Q6ZTR5 3102 aa15.17■□□□□ 0.02
SNX13-207ENST00000475800 A0A0J9YYE9 177 aa15.17■□□□□ 0.02
SNX13-207ENST00000475800 CAPN8A6NHC0 703 aa15.17■□□□□ 0.02
SNX13-207ENST00000475800 ARHGAP33O14559 1287 aa15.17■□□□□ 0.02
SNX13-207ENST00000475800 TOR1BO14657 336 aa15.17■□□□□ 0.02
SNX13-207ENST00000475800 LZTS3O60299 673 aaPredicted RBP15.17■□□□□ 0.02
SNX13-207ENST00000475800 GCATO75600 419 aa15.17■□□□□ 0.02
SNX13-207ENST00000475800 PAK4O96013 591 aaPredicted RBP15.17■□□□□ 0.02
SNX13-207ENST00000475800 PRLP01236 227 aa15.17■□□□□ 0.02
SNX13-207ENST00000475800 EPOP01588 193 aa15.17■□□□□ 0.02
SNX13-207ENST00000475800 TRBC1P01850 177 aa15.17■□□□□ 0.02
SNX13-207ENST00000475800 PDHA1P08559 390 aa15.17■□□□□ 0.02
SNX13-207ENST00000475800 C6P13671 934 aa15.17■□□□□ 0.02
SNX13-207ENST00000475800 PRLRP16471 622 aa15.17■□□□□ 0.02
SNX13-207ENST00000475800 ZNF30P17039 623 aa15.17■□□□□ 0.02
SNX13-207ENST00000475800 ENGP17813 658 aa15.17■□□□□ 0.02
SNX13-207ENST00000475800 ACTN2P35609 894 aa15.17■□□□□ 0.02
SNX13-207ENST00000475800 LIG3P49916 1009 aa15.17■□□□□ 0.02
SNX13-207ENST00000475800 ATXN3P54252 364 aaPredicted RBP15.17■□□□□ 0.02
SNX13-207ENST00000475800 GEMP55040 296 aa15.17■□□□□ 0.02
SNX13-207ENST00000475800 C21orf59P57076 290 aa15.17■□□□□ 0.02
SNX13-207ENST00000475800 RALGDSQ12967 914 aa15.17■□□□□ 0.02
SNX13-207ENST00000475800 IHHQ14623 411 aa15.17■□□□□ 0.02
SNX13-207ENST00000475800 OASLQ15646 514 aaKnown RBP15.17■□□□□ 0.02
SNX13-207ENST00000475800 P3H1Q32P28 736 aa15.17■□□□□ 0.02
SNX13-207ENST00000475800 HS1BP3Q53T59 392 aa15.17■□□□□ 0.02
SNX13-207ENST00000475800 LIPIQ6XZB0 460 aa15.17■□□□□ 0.02
SNX13-207ENST00000475800 ARHGEF18Q6ZSZ5 1173 aa15.17■□□□□ 0.02
SNX13-207ENST00000475800 RAVER1Q8IY67 606 aaKnown RBP15.17■□□□□ 0.02
SNX13-207ENST00000475800 LPCAT1Q8NF37 534 aa15.17■□□□□ 0.02
SNX13-207ENST00000475800 ATG4AQ8WYN0 398 aa15.17■□□□□ 0.02
SNX13-207ENST00000475800 KLK6Q92876 244 aa15.17■□□□□ 0.02
SNX13-207ENST00000475800 RTP4Q96DX8 246 aa15.17■□□□□ 0.02
SNX13-207ENST00000475800 LYSMD1Q96S90 227 aa15.17■□□□□ 0.02
SNX13-207ENST00000475800 OSBPL9Q96SU4 736 aa15.17■□□□□ 0.02
SNX13-207ENST00000475800 TMEM121Q9BTD3 319 aa15.17■□□□□ 0.02
SNX13-207ENST00000475800 C10orf88Q9H8K7 445 aa15.17■□□□□ 0.02
SNX13-207ENST00000475800 ZNF148Q9UQR1 794 aa15.17■□□□□ 0.02
SNX13-207ENST00000475800 AAR2Q9Y312 384 aaKnown RBP15.17■□□□□ 0.02
SNX13-207ENST00000475800 A0A1W2PR77 199 aa15.16■□□□□ 0.02
SNX13-207ENST00000475800 CTAGE9A4FU28 777 aa15.16■□□□□ 0.02
SNX13-207ENST00000475800 ANKRD66B4E2M5 251 aa15.16■□□□□ 0.02
SNX13-207ENST00000475800 PGRMC1O00264 195 aaKnown RBP15.16■□□□□ 0.02
SNX13-207ENST00000475800 FPGTO14772 594 aa15.16■□□□□ 0.02
SNX13-207ENST00000475800 PMPCBO75439 489 aa15.16■□□□□ 0.02
SNX13-207ENST00000475800 HEXIM1O94992 359 aaKnown RBP15.16■□□□□ 0.02
SNX13-207ENST00000475800 NDST3O95803 873 aa15.16■□□□□ 0.02
SNX13-207ENST00000475800 MT-CYBP00156 380 aaPredicted RBP15.16■□□□□ 0.02
SNX13-207ENST00000475800 PRKCGP05129 697 aa15.16■□□□□ 0.02
SNX13-207ENST00000475800 ITGAVP06756 1048 aa15.16■□□□□ 0.02
SNX13-207ENST00000475800 ITIH2P19823 946 aa15.16■□□□□ 0.02
SNX13-207ENST00000475800 CSNK1EP49674 416 aaKnown RBP15.16■□□□□ 0.02
SNX13-207ENST00000475800 FGL2Q14314 439 aa15.16■□□□□ 0.02
SNX13-207ENST00000475800 SIX1Q15475 284 aaPredicted RBP15.16■□□□□ 0.02
SNX13-207ENST00000475800 DCP2Q8IU60 420 aaKnown RBP15.16■□□□□ 0.02
SNX13-207ENST00000475800 FAM71DQ8N9W8 422 aa15.16■□□□□ 0.02
SNX13-207ENST00000475800 SPATA22Q8NHS9 363 aa15.16■□□□□ 0.02
SNX13-207ENST00000475800 ACTRT1Q8TDG2 376 aa15.16■□□□□ 0.02
SNX13-207ENST00000475800 C1orf54Q8WWF1 131 aa15.16■□□□□ 0.02
SNX13-207ENST00000475800 TRIB3Q96RU7 358 aa15.16■□□□□ 0.02
SNX13-207ENST00000475800 NAPGQ99747 312 aaPredicted RBP15.16■□□□□ 0.02
SNX13-207ENST00000475800 MLPHQ9BV36 600 aaPredicted RBP15.16■□□□□ 0.02
SNX13-207ENST00000475800 FSD1LQ9BXM9 530 aa15.16■□□□□ 0.02
SNX13-207ENST00000475800 DRG1Q9Y295 367 aaKnown RBP15.16■□□□□ 0.02
SNX13-207ENST00000475800 TMEM131Q92545 1883 aa15.15■□□□□ 0.02
SNX13-207ENST00000475800 GOLGA6L10A0A0M3HER8 536 aa15.15■□□□□ 0.02
SNX13-207ENST00000475800 SPAARA0A1B0GVQ0 90 aa15.15■□□□□ 0.02
SNX13-207ENST00000475800 NPIPB15A6NHN6 443 aaPredicted RBP15.15■□□□□ 0.02
SNX13-207ENST00000475800 A6NNZ2 444 aa15.15■□□□□ 0.02
SNX13-207ENST00000475800 PSMD3O43242 534 aa15.15■□□□□ 0.02
SNX13-207ENST00000475800 DFNA5O60443 496 aa15.15■□□□□ 0.02
SNX13-207ENST00000475800 CER1O95813 267 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms